RNA–Protein interactions for RNA: ENST00000588961.1

KDM4B-207, Transcript of lysine demethylase 4B, humanhuman

TSL 4

Gene KDM4B, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-207ENST00000588961 RGPD4Q7Z3J3 1758 aa11.18□□□□□ -0.62
KDM4B-207ENST00000588961 PTCD1O75127 700 aaKnown RBP11.18□□□□□ -0.62
KDM4B-207ENST00000588961 HMGB2P26583 209 aaKnown RBP11.18□□□□□ -0.62
KDM4B-207ENST00000588961 CALD1Q05682 793 aaKnown RBP11.18□□□□□ -0.62
KDM4B-207ENST00000588961 NBPF14Q5TI25 921 aa11.18□□□□□ -0.62
KDM4B-207ENST00000588961 THUMPD2Q9BTF0 503 aaKnown RBP11.18□□□□□ -0.62
KDM4B-207ENST00000588961 ANO8Q9HCE9 1232 aaPredicted RBP11.18□□□□□ -0.62
KDM4B-207ENST00000588961 CLEC11AQ9Y240 323 aa11.18□□□□□ -0.62
KDM4B-207ENST00000588961 ADAMTS7Q9UKP4 1686 aa11.17□□□□□ -0.62
KDM4B-207ENST00000588961 LOC102724428A0A0B4J2F2 783 aa11.17□□□□□ -0.62
KDM4B-207ENST00000588961 HTATSF1O43719 755 aaKnown RBP11.17□□□□□ -0.62
KDM4B-207ENST00000588961 ATP6V1AP38606 617 aa11.17□□□□□ -0.62
KDM4B-207ENST00000588961 SIK1P57059 783 aa11.17□□□□□ -0.62
KDM4B-207ENST00000588961 SLC27A3Q5K4L6 730 aa11.17□□□□□ -0.62
KDM4B-207ENST00000588961 SLC4A9Q96Q91 983 aa11.17□□□□□ -0.62
KDM4B-207ENST00000588961 LY75O60449 1722 aa11.17□□□□□ -0.62
KDM4B-207ENST00000588961 DLG5Q8TDM6 1919 aa11.17□□□□□ -0.62
KDM4B-207ENST00000588961 CEMIPQ8WUJ3 1361 aa11.16□□□□□ -0.62
KDM4B-207ENST00000588961 KCNQ3O43525 872 aa11.16□□□□□ -0.62
KDM4B-207ENST00000588961 ITPK1Q13572 414 aa11.16□□□□□ -0.62
KDM4B-207ENST00000588961 ZNF827Q17R98 1081 aa11.16□□□□□ -0.62
KDM4B-207ENST00000588961 EXOC6Q8TAG9 804 aa11.16□□□□□ -0.62
KDM4B-207ENST00000588961 STK32BQ9NY57 414 aa11.16□□□□□ -0.62
KDM4B-207ENST00000588961 MIS18AQ9NYP9 233 aa11.16□□□□□ -0.62
KDM4B-207ENST00000588961 MRC1P22897 1456 aa11.16□□□□□ -0.62
KDM4B-207ENST00000588961 BTBD11A6QL63 1104 aa11.15□□□□□ -0.62
KDM4B-207ENST00000588961 BRPF1P55201 1214 aaPredicted RBP11.15□□□□□ -0.62
KDM4B-207ENST00000588961 SLC15A2Q16348 729 aa11.15□□□□□ -0.62
KDM4B-207ENST00000588961 CENPQQ7L2Z9 268 aaPredicted RBP11.15□□□□□ -0.62
KDM4B-207ENST00000588961 TAF7Q15545 349 aaPredicted RBP11.14□□□□□ -0.63
KDM4B-207ENST00000588961 SMIM5Q71RC9 77 aa11.14□□□□□ -0.63
KDM4B-207ENST00000588961 TTC5Q8N0Z6 440 aa11.14□□□□□ -0.63
KDM4B-207ENST00000588961 LINC00116Q8NCU8 138 aa11.14□□□□□ -0.63
KDM4B-207ENST00000588961 PDGFDQ9GZP0 370 aaPredicted RBP11.14□□□□□ -0.63
KDM4B-207ENST00000588961 TRIM35Q9UPQ4 493 aa11.14□□□□□ -0.63
KDM4B-207ENST00000588961 LMOD3Q0VAK6 560 aa11.13□□□□□ -0.63
KDM4B-207ENST00000588961 ZNF790Q6PG37 636 aa11.13□□□□□ -0.63
KDM4B-207ENST00000588961 TFCP2L1Q9NZI6 479 aa11.13□□□□□ -0.63
KDM4B-207ENST00000588961 SIPA1L3O60292 1781 aaPredicted RBP11.13□□□□□ -0.63
KDM4B-207ENST00000588961 PAPPAQ13219 1627 aa11.13□□□□□ -0.63
KDM4B-207ENST00000588961 RARSP54136 660 aaKnown RBP11.12□□□□□ -0.63
KDM4B-207ENST00000588961 DNAJC10Q8IXB1 793 aa11.12□□□□□ -0.63
KDM4B-207ENST00000588961 ZNF496Q96IT1 587 aaPredicted RBP11.12□□□□□ -0.63
KDM4B-207ENST00000588961 LAS1LQ9Y4W2 734 aaKnown RBP11.12□□□□□ -0.63
KDM4B-207ENST00000588961 C5P01031 1676 aa11.11□□□□□ -0.63
KDM4B-207ENST00000588961 KCPQ6ZWJ8 1503 aa11.11□□□□□ -0.63
KDM4B-207ENST00000588961 AK7Q96M32 723 aa11.11□□□□□ -0.63
KDM4B-207ENST00000588961 CRBNQ96SW2 442 aa11.11□□□□□ -0.63
KDM4B-207ENST00000588961 CHMP4BQ9H444 224 aaKnown RBP11.11□□□□□ -0.63
KDM4B-207ENST00000588961 TAF1LQ8IZX4 1826 aa11.11□□□□□ -0.63
KDM4B-207ENST00000588961 KDM2BQ8NHM5 1336 aa11.1□□□□□ -0.63
KDM4B-207ENST00000588961 C4BP0C0L5 1744 aa11.1□□□□□ -0.63
KDM4B-207ENST00000588961 PRAMEF22A3QJZ6 481 aa11.1□□□□□ -0.63
KDM4B-207ENST00000588961 ALDH1L2Q3SY69 923 aa11.1□□□□□ -0.63
KDM4B-207ENST00000588961 AMIGO3Q86WK7 504 aa11.1□□□□□ -0.63
KDM4B-207ENST00000588961 FMNL2Q96PY5 1086 aa11.1□□□□□ -0.63
KDM4B-207ENST00000588961 TSPYL4Q9UJ04 414 aa11.1□□□□□ -0.63
KDM4B-207ENST00000588961 PNPLA7Q6ZV29 1317 aa11.09□□□□□ -0.63
KDM4B-207ENST00000588961 HEG1Q9ULI3 1381 aa11.09□□□□□ -0.63
KDM4B-207ENST00000588961 GNPATO15228 680 aa11.09□□□□□ -0.63
KDM4B-207ENST00000588961 IPO8O15397 1037 aaKnown RBP11.09□□□□□ -0.63
KDM4B-207ENST00000588961 PHF14O94880 888 aa11.09□□□□□ -0.63
KDM4B-207ENST00000588961 TJP1Q07157 1748 aa11.09□□□□□ -0.63
KDM4B-207ENST00000588961 UBR2Q8IWV8 1755 aa11.08□□□□□ -0.64
KDM4B-207ENST00000588961 ZBTB7AO95365 584 aa11.08□□□□□ -0.64
KDM4B-207ENST00000588961 CYP19A1P11511 503 aaPredicted RBP11.08□□□□□ -0.64
KDM4B-207ENST00000588961 CRKLP46109 303 aaKnown RBP11.08□□□□□ -0.64
KDM4B-207ENST00000588961 COL23A1Q86Y22 540 aaPredicted RBP11.08□□□□□ -0.64
KDM4B-207ENST00000588961 VSIG10Q8N0Z9 540 aa11.08□□□□□ -0.64
KDM4B-207ENST00000588961 ARHGAP45Q92619 1136 aa11.08□□□□□ -0.64
KDM4B-207ENST00000588961 USP16Q9Y5T5 823 aa11.08□□□□□ -0.64
KDM4B-207ENST00000588961 ZNF831Q5JPB2 1677 aa11.08□□□□□ -0.64
KDM4B-207ENST00000588961 PLIN1O60240 522 aa11.07□□□□□ -0.64
KDM4B-207ENST00000588961 EIF4A1P60842 406 aaKnown RBP11.07□□□□□ -0.64
KDM4B-207ENST00000588961 GNAI1P63096 354 aa11.07□□□□□ -0.64
KDM4B-207ENST00000588961 RC3H1Q5TC82 1133 aaKnown RBP11.07□□□□□ -0.64
KDM4B-207ENST00000588961 INTS5Q6P9B9 1019 aaKnown RBP11.07□□□□□ -0.64
KDM4B-207ENST00000588961 TUBGCP6Q96RT7 1819 aa11.07□□□□□ -0.64
KDM4B-207ENST00000588961 CNTNAP4Q9C0A0 1308 aa11.07□□□□□ -0.64
KDM4B-207ENST00000588961 COL5A3P25940 1745 aaPredicted RBP11.06□□□□□ -0.64
KDM4B-207ENST00000588961 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.06□□□□□ -0.64
KDM4B-207ENST00000588961 CHL1O00533 1208 aa11.06□□□□□ -0.64
KDM4B-207ENST00000588961 RPS6KA4O75676 772 aa11.06□□□□□ -0.64
KDM4B-207ENST00000588961 SNRPA1P09661 255 aaKnown RBP11.06□□□□□ -0.64
KDM4B-207ENST00000588961 CANXP27824 592 aaKnown RBP11.06□□□□□ -0.64
KDM4B-207ENST00000588961 ZKSCAN2Q63HK3 967 aa11.06□□□□□ -0.64
KDM4B-207ENST00000588961 CCDC87Q9NVE4 849 aa11.06□□□□□ -0.64
KDM4B-207ENST00000588961 IFT57Q9NWB7 429 aa11.06□□□□□ -0.64
KDM4B-207ENST00000588961 RTCBQ9Y3I0 505 aaKnown RBP11.06□□□□□ -0.64
KDM4B-207ENST00000588961 KDM3BQ7LBC6 1761 aa11.05□□□□□ -0.64
KDM4B-207ENST00000588961 CASZ1Q86V15 1759 aa11.05□□□□□ -0.64
KDM4B-207ENST00000588961 GIGYF1O75420 1035 aaPredicted RBP11.05□□□□□ -0.64
KDM4B-207ENST00000588961 BCAR3O75815 825 aa11.05□□□□□ -0.64
KDM4B-207ENST00000588961 STARD3NLO95772 234 aa11.05□□□□□ -0.64
KDM4B-207ENST00000588961 A1BGP04217 495 aa11.05□□□□□ -0.64
KDM4B-207ENST00000588961 SSFA2P28290 1259 aa11.05□□□□□ -0.64
KDM4B-207ENST00000588961 PIP4K2AP48426 406 aaPredicted RBP11.05□□□□□ -0.64
KDM4B-207ENST00000588961 KRT24Q2M2I5 525 aa11.05□□□□□ -0.64
KDM4B-207ENST00000588961 TRAPPC3LQ5T215 181 aa11.05□□□□□ -0.64
KDM4B-207ENST00000588961 ARHGEF1Q92888 912 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms