RNA–Protein interactions for RNA: ENST00000588690.5

SEPT9-220, Transcript of septin 9, humanhuman

TSL 5 BASIC

Gene SEPT9, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEPT9-220ENST00000588690 SYT1P21579 422 aa17.3■□□□□ 0.36
SEPT9-220ENST00000588690 TRIM6-TRIM34B2RNG4 842 aa17.3■□□□□ 0.36
SEPT9-220ENST00000588690 RIOK3O14730 519 aaKnown RBP17.3■□□□□ 0.36
SEPT9-220ENST00000588690 PDCL2Q8N4E4 241 aa17.3■□□□□ 0.36
SEPT9-220ENST00000588690 SNX14Q9Y5W7 946 aa17.3■□□□□ 0.36
SEPT9-220ENST00000588690 LRRC37A3O60309 1634 aa17.3■□□□□ 0.36
SEPT9-220ENST00000588690 PXDNLA1KZ92 1463 aa17.29■□□□□ 0.36
SEPT9-220ENST00000588690 ATP6V1DQ9Y5K8 247 aa17.29■□□□□ 0.36
SEPT9-220ENST00000588690 SYCP1Q15431 976 aa17.29■□□□□ 0.36
SEPT9-220ENST00000588690 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.28■□□□□ 0.36
SEPT9-220ENST00000588690 A2ML1A8K2U0 1454 aa17.28■□□□□ 0.36
SEPT9-220ENST00000588690 SLC4A10Q6U841 1118 aa17.28■□□□□ 0.36
SEPT9-220ENST00000588690 RUFY3Q7L099 469 aa17.28■□□□□ 0.36
SEPT9-220ENST00000588690 LIMCH1Q9UPQ0 1083 aa17.28■□□□□ 0.36
SEPT9-220ENST00000588690 ZBTB7CA1YPR0 619 aa17.27■□□□□ 0.36
SEPT9-220ENST00000588690 SGSM2O43147 1006 aa17.27■□□□□ 0.36
SEPT9-220ENST00000588690 RAPGEF3O95398 923 aa17.27■□□□□ 0.36
SEPT9-220ENST00000588690 LSG1Q9H089 658 aaKnown RBP17.27■□□□□ 0.36
SEPT9-220ENST00000588690 FAM177BA6PVY3 158 aa17.27■□□□□ 0.36
SEPT9-220ENST00000588690 AK2P54819 239 aa17.27■□□□□ 0.36
SEPT9-220ENST00000588690 GIMAP6Q6P9H5 292 aa17.27■□□□□ 0.36
SEPT9-220ENST00000588690 NUDT16Q96DE0 195 aaKnown RBP17.27■□□□□ 0.36
SEPT9-220ENST00000588690 OVOS2A0A0J9YW53 1432 aa17.27■□□□□ 0.36
SEPT9-220ENST00000588690 OVOS2Q6IE36 1432 aa17.27■□□□□ 0.36
SEPT9-220ENST00000588690 CHAF1AQ13111 956 aaPredicted RBP17.26■□□□□ 0.35
SEPT9-220ENST00000588690 GOLGA6L6A8MZA4 724 aa17.26■□□□□ 0.35
SEPT9-220ENST00000588690 FEZ1Q99689 392 aa17.26■□□□□ 0.35
SEPT9-220ENST00000588690 CACNA1FO60840 1977 aa17.26■□□□□ 0.35
SEPT9-220ENST00000588690 PODXL2Q9NZ53 605 aa17.25■□□□□ 0.35
SEPT9-220ENST00000588690 MTMR6Q9Y217 621 aa17.25■□□□□ 0.35
SEPT9-220ENST00000588690 PI4K2BQ8TCG2 481 aa17.25■□□□□ 0.35
SEPT9-220ENST00000588690 CCDC61Q9Y6R9 512 aa17.25■□□□□ 0.35
SEPT9-220ENST00000588690 TECPR2O15040 1411 aa17.25■□□□□ 0.35
SEPT9-220ENST00000588690 SIRT1Q96EB6 747 aa17.24■□□□□ 0.35
SEPT9-220ENST00000588690 SMC3Q9UQE7 1217 aa17.24■□□□□ 0.35
SEPT9-220ENST00000588690 SSH3Q8TE77 659 aa17.24■□□□□ 0.35
SEPT9-220ENST00000588690 SOS1Q07889 1333 aaPredicted RBP17.24■□□□□ 0.35
SEPT9-220ENST00000588690 TOPAZ1Q8N9V7 1692 aa17.24■□□□□ 0.35
SEPT9-220ENST00000588690 CHD2O14647 1828 aaKnown RBP17.24■□□□□ 0.35
SEPT9-220ENST00000588690 FIBPO43427 364 aa17.24■□□□□ 0.35
SEPT9-220ENST00000588690 RAB11FIP3O75154 756 aa17.24■□□□□ 0.35
SEPT9-220ENST00000588690 RASEFQ8IZ41 740 aa17.24■□□□□ 0.35
SEPT9-220ENST00000588690 FMN2Q9NZ56 1722 aa17.23■□□□□ 0.35
SEPT9-220ENST00000588690 CCDC192P0DO97 292 aa17.23■□□□□ 0.35
SEPT9-220ENST00000588690 FBXO31Q5XUX0 539 aaPredicted RBP17.23■□□□□ 0.35
SEPT9-220ENST00000588690 TSPYL4Q9UJ04 414 aa17.23■□□□□ 0.35
SEPT9-220ENST00000588690 TTC21BQ7Z4L5 1316 aa17.23■□□□□ 0.35
SEPT9-220ENST00000588690 RTF1Q92541 710 aaKnown RBP17.23■□□□□ 0.35
SEPT9-220ENST00000588690 KCNB2Q92953 911 aa17.23■□□□□ 0.35
SEPT9-220ENST00000588690 HYPKQ9NX55 129 aa17.23■□□□□ 0.35
SEPT9-220ENST00000588690 USP31Q70CQ4 1352 aa17.22■□□□□ 0.35
SEPT9-220ENST00000588690 FLIIQ13045 1269 aa17.22■□□□□ 0.35
SEPT9-220ENST00000588690 MIS18AQ9NYP9 233 aa17.22■□□□□ 0.35
SEPT9-220ENST00000588690 RIMS1Q86UR5 1692 aaKnown RBP17.22■□□□□ 0.35
SEPT9-220ENST00000588690 DNM1Q05193 864 aaKnown RBP17.22■□□□□ 0.35
SEPT9-220ENST00000588690 POLA2Q14181 598 aa17.22■□□□□ 0.35
SEPT9-220ENST00000588690 FAM200AQ8TCP9 573 aa17.22■□□□□ 0.35
SEPT9-220ENST00000588690 LRRFIP2Q9Y608 721 aaKnown RBP17.22■□□□□ 0.35
SEPT9-220ENST00000588690 USP42Q9H9J4 1324 aaKnown RBP17.21■□□□□ 0.35
SEPT9-220ENST00000588690 U2AF2P26368 475 aaKnown RBP eCLIP17.21■□□□□ 0.351e-13■□□□□ 9.1
SEPT9-220ENST00000588690 NCBP1Q09161 790 aaKnown RBP17.21■□□□□ 0.35
SEPT9-220ENST00000588690 LARGE1O95461 756 aa17.21■□□□□ 0.35
SEPT9-220ENST00000588690 OGFRQ9NZT2 677 aa17.21■□□□□ 0.35
SEPT9-220ENST00000588690 CCDC171Q6TFL3 1326 aa17.21■□□□□ 0.34
SEPT9-220ENST00000588690 NCKAP5LQ9HCH0 1330 aa17.21■□□□□ 0.34
SEPT9-220ENST00000588690 NPM1P06748 294 aaKnown RBP eCLIP17.2■□□□□ 0.34
SEPT9-220ENST00000588690 STK31Q9BXU1 1019 aa17.2■□□□□ 0.34
SEPT9-220ENST00000588690 KDRP35968 1356 aa17.2■□□□□ 0.34
SEPT9-220ENST00000588690 ELP1O95163 1332 aa17.2■□□□□ 0.34
SEPT9-220ENST00000588690 SPDYE4A6NLX3 237 aa17.2■□□□□ 0.34
SEPT9-220ENST00000588690 ZSCAN31Q96LW9 406 aaPredicted RBP17.2■□□□□ 0.34
SEPT9-220ENST00000588690 MRVI1Q9Y6F6 885 aa17.2■□□□□ 0.34
SEPT9-220ENST00000588690 SMTNL1A8MU46 457 aa17.2■□□□□ 0.34
SEPT9-220ENST00000588690 GJB2P29033 226 aa17.2■□□□□ 0.34
SEPT9-220ENST00000588690 VPS53Q5VIR6 699 aa17.2■□□□□ 0.34
SEPT9-220ENST00000588690 TM6SF1Q9BZW5 370 aa17.2■□□□□ 0.34
SEPT9-220ENST00000588690 USP44Q9H0E7 712 aa17.2■□□□□ 0.34
SEPT9-220ENST00000588690 SH2B1Q9NRF2 756 aaPredicted RBP17.2■□□□□ 0.34
SEPT9-220ENST00000588690 PRR36Q9H6K5 1346 aa17.19■□□□□ 0.34
SEPT9-220ENST00000588690 PTGS1P23219 599 aa17.19■□□□□ 0.34
SEPT9-220ENST00000588690 ST3GAL1Q11201 340 aa17.19■□□□□ 0.34
SEPT9-220ENST00000588690 MTHFSDQ2M296 383 aaKnown RBP17.19■□□□□ 0.34
SEPT9-220ENST00000588690 SPC24Q8NBT2 197 aa17.19■□□□□ 0.34
SEPT9-220ENST00000588690 MAP3K5Q99683 1374 aa17.19■□□□□ 0.34
SEPT9-220ENST00000588690 CCDC30Q5VVM6 783 aa17.19■□□□□ 0.34
SEPT9-220ENST00000588690 METP08581 1390 aa17.19■□□□□ 0.34
SEPT9-220ENST00000588690 PDIA4P13667 645 aaKnown RBP17.18■□□□□ 0.34
SEPT9-220ENST00000588690 RBM43Q6ZSC3 357 aaKnown RBP17.18■□□□□ 0.34
SEPT9-220ENST00000588690 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.18■□□□□ 0.34
SEPT9-220ENST00000588690 NUTM1Q86Y26 1132 aa17.18■□□□□ 0.34
SEPT9-220ENST00000588690 MAP3K19Q56UN5 1328 aa17.18■□□□□ 0.34
SEPT9-220ENST00000588690 ADGRL3Q9HAR2 1447 aa17.18■□□□□ 0.34
SEPT9-220ENST00000588690 PLA2G4DQ86XP0 818 aa17.18■□□□□ 0.34
SEPT9-220ENST00000588690 IL1RAPL2Q9NP60 686 aa17.18■□□□□ 0.34
SEPT9-220ENST00000588690 CTNNA3Q9UI47 895 aa17.18■□□□□ 0.34
SEPT9-220ENST00000588690 FOXO3O43524 673 aa17.17■□□□□ 0.34
SEPT9-220ENST00000588690 HTATSF1O43719 755 aaKnown RBP17.17■□□□□ 0.34
SEPT9-220ENST00000588690 HSP90AB2PQ58FF8 381 aa17.17■□□□□ 0.34
SEPT9-220ENST00000588690 CNTROBQ8N137 903 aa17.17■□□□□ 0.34
SEPT9-220ENST00000588690 ZSWIM6Q9HCJ5 1215 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms