RNA–Protein interactions for RNA: ENST00000588538.5

ATP5D-203, Transcript of ATP synthase subunit delta, mitochondrial, humanhuman

TSL 1 (best)

Gene ATP5D, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP5D-203ENST00000588538 USP42Q9H9J4 1324 aaKnown RBP25.24■■□□□ 1.63
ATP5D-203ENST00000588538 KLHL34Q8N239 644 aa25.23■■□□□ 1.63
ATP5D-203ENST00000588538 KDM3BQ7LBC6 1761 aa25.22■■□□□ 1.63
ATP5D-203ENST00000588538 WDR43Q15061 677 aaKnown RBP eCLIP25.22■■□□□ 1.63
ATP5D-203ENST00000588538 MMP10P09238 476 aa25.21■■□□□ 1.63
ATP5D-203ENST00000588538 NLGN2Q8NFZ4 835 aa25.21■■□□□ 1.63
ATP5D-203ENST00000588538 ADAMTS8Q9UP79 889 aa25.21■■□□□ 1.63
ATP5D-203ENST00000588538 COL15A1P39059 1388 aa25.21■■□□□ 1.63
ATP5D-203ENST00000588538 TMPOP42166 694 aaKnown RBP25.2■■□□□ 1.63
ATP5D-203ENST00000588538 SRP68Q9UHB9 627 aaKnown RBP25.2■■□□□ 1.63
ATP5D-203ENST00000588538 EIF5P55010 431 aaKnown RBP25.19■■□□□ 1.62
ATP5D-203ENST00000588538 RIPK4P57078 832 aa25.19■■□□□ 1.62
ATP5D-203ENST00000588538 PNISRQ8TF01 805 aaKnown RBP25.19■■□□□ 1.62
ATP5D-203ENST00000588538 KIF13BQ9NQT8 1826 aa25.19■■□□□ 1.62
ATP5D-203ENST00000588538 UTRNP46939 3433 aa25.19■■□□□ 1.62
ATP5D-203ENST00000588538 SNRPA1P09661 255 aaKnown RBP25.18■■□□□ 1.62
ATP5D-203ENST00000588538 RUNDC1Q96C34 613 aa25.18■■□□□ 1.62
ATP5D-203ENST00000588538 THUMPD2Q9BTF0 503 aaKnown RBP25.18■■□□□ 1.62
ATP5D-203ENST00000588538 NARFQ9UHQ1 456 aa25.18■■□□□ 1.62
ATP5D-203ENST00000588538 ZPR1O75312 459 aa25.17■■□□□ 1.62
ATP5D-203ENST00000588538 CANXP27824 592 aaKnown RBP25.17■■□□□ 1.62
ATP5D-203ENST00000588538 FKBP8Q14318 412 aa25.17■■□□□ 1.62
ATP5D-203ENST00000588538 CCDC146Q8IYE0 955 aa25.17■■□□□ 1.62
ATP5D-203ENST00000588538 IL6STP40189 918 aaPredicted RBP25.16■■□□□ 1.62
ATP5D-203ENST00000588538 LMOD3Q0VAK6 560 aa25.16■■□□□ 1.62
ATP5D-203ENST00000588538 MIS18AQ9NYP9 233 aa25.16■■□□□ 1.62
ATP5D-203ENST00000588538 USP16Q9Y5T5 823 aa25.16■■□□□ 1.62
ATP5D-203ENST00000588538 GOLGB1Q14789 3259 aaKnown RBP25.15■■□□□ 1.62
ATP5D-203ENST00000588538 CCER2I3L3R5 266 aa25.15■■□□□ 1.62
ATP5D-203ENST00000588538 USPL1Q5W0Q7 1092 aa25.15■■□□□ 1.62
ATP5D-203ENST00000588538 A0A087WZG4 1122 aa25.14■■□□□ 1.61
ATP5D-203ENST00000588538 PRAMEF22A3QJZ6 481 aa25.14■■□□□ 1.61
ATP5D-203ENST00000588538 A1BGP04217 495 aa25.14■■□□□ 1.61
ATP5D-203ENST00000588538 LAMB4A4D0S4 1761 aa25.13■■□□□ 1.61
ATP5D-203ENST00000588538 C10orf71Q711Q0 1435 aa25.13■■□□□ 1.61
ATP5D-203ENST00000588538 TM4SF1P30408 202 aa25.13■■□□□ 1.61
ATP5D-203ENST00000588538 PARP3Q9Y6F1 533 aa25.13■■□□□ 1.61
ATP5D-203ENST00000588538 BCL2L12Q9HB09 334 aa25.12■■□□□ 1.61
ATP5D-203ENST00000588538 BABAM1Q9NWV8 329 aa25.12■■□□□ 1.61
ATP5D-203ENST00000588538 EIF4A1P60842 406 aaKnown RBP25.11■■□□□ 1.61
ATP5D-203ENST00000588538 DDR1Q08345 913 aa25.11■■□□□ 1.61
ATP5D-203ENST00000588538 RRP7AQ9Y3A4 280 aaKnown RBP25.11■■□□□ 1.61
ATP5D-203ENST00000588538 SCN7AQ01118 1682 aa25.11■■□□□ 1.61
ATP5D-203ENST00000588538 KIAA1551Q9HCM1 1747 aa25.11■■□□□ 1.61
ATP5D-203ENST00000588538 GPR162Q16538 588 aa25.1■■□□□ 1.61
ATP5D-203ENST00000588538 CHD4Q14839 1912 aa25.1■■□□□ 1.61
ATP5D-203ENST00000588538 GIGYF1O75420 1035 aaPredicted RBP25.09■■□□□ 1.61
ATP5D-203ENST00000588538 CCDC184Q52MB2 194 aa25.09■■□□□ 1.61
ATP5D-203ENST00000588538 TRIM35Q9UPQ4 493 aa25.09■■□□□ 1.61
ATP5D-203ENST00000588538 POLRMTO00411 1230 aaKnown RBP25.08■■□□□ 1.61
ATP5D-203ENST00000588538 NRXN2Q9P2S2 1712 aa25.08■■□□□ 1.61
ATP5D-203ENST00000588538 TGFB2P61812 414 aa25.07■■□□□ 1.6
ATP5D-203ENST00000588538 NEUROD2Q15784 382 aa25.07■■□□□ 1.6
ATP5D-203ENST00000588538 PXDNLA1KZ92 1463 aa25.06■■□□□ 1.6
ATP5D-203ENST00000588538 YBX3P16989 372 aaKnown RBP eCLIP25.06■■□□□ 1.62e-10■■□□□ 11.5
ATP5D-203ENST00000588538 AFDNP55196 1824 aaKnown RBP25.06■■□□□ 1.6
ATP5D-203ENST00000588538 NFIXQ14938 502 aa25.06■■□□□ 1.6
ATP5D-203ENST00000588538 BCORQ6W2J9 1755 aa25.06■■□□□ 1.6
ATP5D-203ENST00000588538 TSPYL4Q9UJ04 414 aa25.06■■□□□ 1.6
ATP5D-203ENST00000588538 NBPF26B4DH59 902 aa25.05■■□□□ 1.6
ATP5D-203ENST00000588538 NBPF10Q6P3W6 841 aaKnown RBP25.05■■□□□ 1.6
ATP5D-203ENST00000588538 NBPF15Q8N660 670 aa25.05■■□□□ 1.6
ATP5D-203ENST00000588538 NPM2Q86SE8 214 aaKnown RBP25.05■■□□□ 1.6
ATP5D-203ENST00000588538 TBC1D2BQ9UPU7 963 aa25.05■■□□□ 1.6
ATP5D-203ENST00000588538 N4BP2Q86UW6 1770 aaPredicted RBP25.04■■□□□ 1.6
ATP5D-203ENST00000588538 GRIN3BO60391 1043 aa25.04■■□□□ 1.6
ATP5D-203ENST00000588538 CAMTA2O94983 1202 aa25.04■■□□□ 1.6
ATP5D-203ENST00000588538 PIP4K2AP48426 406 aaPredicted RBP25.04■■□□□ 1.6
ATP5D-203ENST00000588538 PELP1Q8IZL8 1130 aaKnown RBP25.04■■□□□ 1.6
ATP5D-203ENST00000588538 ZNF330Q9Y3S2 320 aaPredicted RBP25.04■■□□□ 1.6
ATP5D-203ENST00000588538 YY1P25490 414 aa25.03■■□□□ 1.6
ATP5D-203ENST00000588538 BRCA1P38398 1863 aaKnown RBP25.02■■□□□ 1.6
ATP5D-203ENST00000588538 CHL1O00533 1208 aa25.02■■□□□ 1.6
ATP5D-203ENST00000588538 APAF1O14727 1248 aa25.02■■□□□ 1.6
ATP5D-203ENST00000588538 DZIP3Q86Y13 1208 aaKnown RBP25.02■■□□□ 1.6
ATP5D-203ENST00000588538 RGL2O15211 777 aa25■■□□□ 1.59
ATP5D-203ENST00000588538 SERPINB2P05120 415 aa24.99■■□□□ 1.59
ATP5D-203ENST00000588538 TBC1D9BQ66K14 1250 aa24.99■■□□□ 1.59
ATP5D-203ENST00000588538 CLEC4GQ6UXB4 293 aa24.99■■□□□ 1.59
ATP5D-203ENST00000588538 ERBB4Q15303 1308 aa24.98■■□□□ 1.59
ATP5D-203ENST00000588538 MRS2Q9HD23 443 aa24.98■■□□□ 1.59
ATP5D-203ENST00000588538 A0A0G2JLW4 131 aa24.97■■□□□ 1.59
ATP5D-203ENST00000588538 DPEP1P16444 411 aa24.97■■□□□ 1.59
ATP5D-203ENST00000588538 KCNA3P22001 575 aa24.97■■□□□ 1.59
ATP5D-203ENST00000588538 CFAP44Q96MT7 982 aa24.96■■□□□ 1.59
ATP5D-203ENST00000588538 CARMIL3Q8ND23 1372 aa24.96■■□□□ 1.59
ATP5D-203ENST00000588538 BICDL1Q6ZP65 573 aa24.95■■□□□ 1.59
ATP5D-203ENST00000588538 ZNF853P0CG23 659 aa24.93■■□□□ 1.58
ATP5D-203ENST00000588538 SETDB2Q96T68 719 aa24.93■■□□□ 1.58
ATP5D-203ENST00000588538 ZNF652Q9Y2D9 606 aa24.93■■□□□ 1.58
ATP5D-203ENST00000588538 ARFGEF1Q9Y6D6 1849 aa24.92■■□□□ 1.58
ATP5D-203ENST00000588538 DLEC1Q9Y238 1755 aa24.92■■□□□ 1.58
ATP5D-203ENST00000588538 CALD1Q05682 793 aaKnown RBP24.92■■□□□ 1.58
ATP5D-203ENST00000588538 WWC3Q9ULE0 1092 aa24.92■■□□□ 1.58
ATP5D-203ENST00000588538 LAS1LQ9Y4W2 734 aaKnown RBP24.92■■□□□ 1.58
ATP5D-203ENST00000588538 ANKRD31Q8N7Z5 1873 aa24.91■■□□□ 1.58
ATP5D-203ENST00000588538 ERVV-1B6SEH8 477 aa24.91■■□□□ 1.58
ATP5D-203ENST00000588538 PDIA6Q15084 440 aa24.91■■□□□ 1.58
ATP5D-203ENST00000588538 NCBP3Q53F19 620 aaKnown RBP24.91■■□□□ 1.58
ATP5D-203ENST00000588538 LRP10Q7Z4F1 713 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms