RNA–Protein interactions for RNA: ENST00000588041.1

AC002546.1-201, humanhuman

BASIC

Gene AC002546.1, Length 2,504 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC002546.1-201ENST00000588041 PCDHGA10Q9Y5H3 936 aa4.4□□□□□ -1.7
AC002546.1-201ENST00000588041 ESYT3A0FGR9 886 aa4.4□□□□□ -1.71
AC002546.1-201ENST00000588041 C3orf80F5H4A9 247 aa4.4□□□□□ -1.71
AC002546.1-201ENST00000588041 FAM163BP0C2L3 166 aa4.4□□□□□ -1.71
AC002546.1-201ENST00000588041 CHMP4BP1P59074 171 aa4.4□□□□□ -1.71
AC002546.1-201ENST00000588041 FMR1Q06787 632 aaKnown RBP eCLIP4.4□□□□□ -1.71
AC002546.1-201ENST00000588041 NFE2L2Q16236 605 aa4.4□□□□□ -1.71
AC002546.1-201ENST00000588041 RGL3Q3MIN7 710 aa4.4□□□□□ -1.71
AC002546.1-201ENST00000588041 PLEKHG4Q58EX7 1191 aa4.4□□□□□ -1.71
AC002546.1-201ENST00000588041 TTC30BQ8N4P2 665 aa4.4□□□□□ -1.71
AC002546.1-201ENST00000588041 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.4□□□□□ -1.71
AC002546.1-201ENST00000588041 INO80BQ9C086 356 aaPredicted RBP4.4□□□□□ -1.71
AC002546.1-201ENST00000588041 ARHGEF10LQ9HCE6 1279 aa4.4□□□□□ -1.71
AC002546.1-201ENST00000588041 PTPRHQ9HD43 1115 aa4.4□□□□□ -1.71
AC002546.1-201ENST00000588041 CCDC87Q9NVE4 849 aa4.4□□□□□ -1.71
AC002546.1-201ENST00000588041 RCCD1A6NED2 376 aa4.39□□□□□ -1.71
AC002546.1-201ENST00000588041 SFI1A8K8P3 1242 aa4.39□□□□□ -1.71
AC002546.1-201ENST00000588041 NRDCO43847 1150 aa4.39□□□□□ -1.71
AC002546.1-201ENST00000588041 DKK1O94907 266 aa4.39□□□□□ -1.71
AC002546.1-201ENST00000588041 MZF1P28698 734 aaPredicted RBP4.39□□□□□ -1.71
AC002546.1-201ENST00000588041 FAM193AP78312 1265 aa4.39□□□□□ -1.71
AC002546.1-201ENST00000588041 EHHADHQ08426 723 aa4.39□□□□□ -1.71
AC002546.1-201ENST00000588041 PPP4R4Q6NUP7 873 aa4.39□□□□□ -1.71
AC002546.1-201ENST00000588041 C1orf216Q8TAB5 229 aa4.39□□□□□ -1.71
AC002546.1-201ENST00000588041 NKX2-3Q8TAU0 364 aa4.39□□□□□ -1.71
AC002546.1-201ENST00000588041 BMP2KQ9NSY1 1161 aaPredicted RBP4.39□□□□□ -1.71
AC002546.1-201ENST00000588041 SNTG2Q9NY99 539 aa4.39□□□□□ -1.71
AC002546.1-201ENST00000588041 SWAP70Q9UH65 585 aa4.39□□□□□ -1.71
AC002546.1-201ENST00000588041 COLQQ9Y215 455 aaPredicted RBP4.39□□□□□ -1.71
AC002546.1-201ENST00000588041 GPR182O15218 404 aa4.39□□□□□ -1.71
AC002546.1-201ENST00000588041 BPNT1O95861 308 aa4.39□□□□□ -1.71
AC002546.1-201ENST00000588041 FOSP01100 380 aaPredicted RBP4.39□□□□□ -1.71
AC002546.1-201ENST00000588041 FDX1P10109 184 aa4.39□□□□□ -1.71
AC002546.1-201ENST00000588041 ETFBP38117 255 aa4.39□□□□□ -1.71
AC002546.1-201ENST00000588041 FKBP5Q13451 457 aaPredicted RBP4.39□□□□□ -1.71
AC002546.1-201ENST00000588041 COL19A1Q14993 1142 aa4.39□□□□□ -1.71
AC002546.1-201ENST00000588041 PRPF38BQ5VTL8 546 aaKnown RBP4.39□□□□□ -1.71
AC002546.1-201ENST00000588041 CYLDQ9NQC7 956 aa4.39□□□□□ -1.71
AC002546.1-201ENST00000588041 RPGRIP1LQ68CZ1 1315 aa4.39□□□□□ -1.71
AC002546.1-201ENST00000588041 PRPF40AO75400 957 aaKnown RBP4.38□□□□□ -1.71
AC002546.1-201ENST00000588041 CDC45O75419 566 aa4.38□□□□□ -1.71
AC002546.1-201ENST00000588041 IGHA2P01877 340 aa4.38□□□□□ -1.71
AC002546.1-201ENST00000588041 NEFMP07197 916 aa4.38□□□□□ -1.71
AC002546.1-201ENST00000588041 C21orf62-AS1Q17RA5 79 aa4.38□□□□□ -1.71
AC002546.1-201ENST00000588041 BRDTQ58F21 947 aaPredicted RBP4.38□□□□□ -1.71
AC002546.1-201ENST00000588041 PLEKHM2Q8IWE5 1019 aa4.38□□□□□ -1.71
AC002546.1-201ENST00000588041 LILRB2Q8N423 598 aa4.38□□□□□ -1.71
AC002546.1-201ENST00000588041 APBA2Q99767 749 aa4.38□□□□□ -1.71
AC002546.1-201ENST00000588041 SENP7Q9BQF6 1050 aa4.38□□□□□ -1.71
AC002546.1-201ENST00000588041 AVENQ9NQS1 362 aaPredicted RBP4.38□□□□□ -1.71
AC002546.1-201ENST00000588041 ENAMQ9NRM1 1142 aa4.38□□□□□ -1.71
AC002546.1-201ENST00000588041 HOMER2Q9NSB8 354 aa4.38□□□□□ -1.71
AC002546.1-201ENST00000588041 FGAP02671 866 aa4.38□□□□□ -1.71
AC002546.1-201ENST00000588041 MASP1P48740 699 aa4.38□□□□□ -1.71
AC002546.1-201ENST00000588041 TERF1P54274 439 aa4.38□□□□□ -1.71
AC002546.1-201ENST00000588041 PAK2Q13177 524 aa4.38□□□□□ -1.71
AC002546.1-201ENST00000588041 BRD3Q15059 726 aa4.38□□□□□ -1.71
AC002546.1-201ENST00000588041 KANK3Q6NY19 840 aa4.38□□□□□ -1.71
AC002546.1-201ENST00000588041 FTSJ3Q8IY81 847 aaKnown RBP4.38□□□□□ -1.71
AC002546.1-201ENST00000588041 PDILTQ8N807 584 aa4.38□□□□□ -1.71
AC002546.1-201ENST00000588041 TPCN2Q8NHX9 752 aa4.38□□□□□ -1.71
AC002546.1-201ENST00000588041 ENOX1Q8TC92 643 aaKnown RBP4.38□□□□□ -1.71
AC002546.1-201ENST00000588041 CCDC85AQ96PX6 553 aaPredicted RBP4.38□□□□□ -1.71
AC002546.1-201ENST00000588041 EPAS1Q99814 870 aa4.38□□□□□ -1.71
AC002546.1-201ENST00000588041 AS3MTQ9HBK9 375 aa4.38□□□□□ -1.71
AC002546.1-201ENST00000588041 ARNT2Q9HBZ2 717 aa4.38□□□□□ -1.71
AC002546.1-201ENST00000588041 TPX2Q9ULW0 747 aaKnown RBP4.38□□□□□ -1.71
AC002546.1-201ENST00000588041 F6X3S4 739 aa4.37□□□□□ -1.71
AC002546.1-201ENST00000588041 IFRD1O00458 451 aaPredicted RBP4.37□□□□□ -1.71
AC002546.1-201ENST00000588041 ALDH1L1O75891 902 aa4.37□□□□□ -1.71
AC002546.1-201ENST00000588041 LDHCP07864 332 aa4.37□□□□□ -1.71
AC002546.1-201ENST00000588041 LIG1P18858 919 aa4.37□□□□□ -1.71
AC002546.1-201ENST00000588041 MPSTP25325 297 aa4.37□□□□□ -1.71
AC002546.1-201ENST00000588041 RASA3Q14644 834 aa4.37□□□□□ -1.71
AC002546.1-201ENST00000588041 TMEM92Q6UXU6 159 aa4.37□□□□□ -1.71
AC002546.1-201ENST00000588041 SKAP1Q86WV1 359 aa4.37□□□□□ -1.71
AC002546.1-201ENST00000588041 NGDNQ8NEJ9 315 aaKnown RBP4.37□□□□□ -1.71
AC002546.1-201ENST00000588041 CXorf38Q8TB03 319 aa4.37□□□□□ -1.71
AC002546.1-201ENST00000588041 MARVELD3Q96A59 401 aa4.37□□□□□ -1.71
AC002546.1-201ENST00000588041 EMID1Q96A84 441 aaPredicted RBP4.37□□□□□ -1.71
AC002546.1-201ENST00000588041 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.37□□□□□ -1.71
AC002546.1-201ENST00000588041 ATP5J2-PTCD1G3V325 749 aa4.37□□□□□ -1.71
AC002546.1-201ENST00000588041 PPP1R12AO14974 1030 aaPredicted RBP4.37□□□□□ -1.71
AC002546.1-201ENST00000588041 DHX16O60231 1041 aaKnown RBP4.37□□□□□ -1.71
AC002546.1-201ENST00000588041 SIM2Q14190 667 aaPredicted RBP4.37□□□□□ -1.71
AC002546.1-201ENST00000588041 DSC3Q14574 896 aa4.37□□□□□ -1.71
AC002546.1-201ENST00000588041 TTF1Q15361 905 aaPredicted RBP4.37□□□□□ -1.71
AC002546.1-201ENST00000588041 LONRF1Q17RB8 773 aa4.37□□□□□ -1.71
AC002546.1-201ENST00000588041 ZKSCAN2Q63HK3 967 aa4.37□□□□□ -1.71
AC002546.1-201ENST00000588041 SLC4A10Q6U841 1118 aa4.37□□□□□ -1.71
AC002546.1-201ENST00000588041 ARMCX6Q7L4S7 300 aa4.37□□□□□ -1.71
AC002546.1-201ENST00000588041 CKAP2LQ8IYA6 745 aa4.37□□□□□ -1.71
AC002546.1-201ENST00000588041 CACTIN-AS1Q8N1I8 211 aa4.37□□□□□ -1.71
AC002546.1-201ENST00000588041 PAF1Q8N7H5 531 aa4.37□□□□□ -1.71
AC002546.1-201ENST00000588041 LRRC27Q9C0I9 530 aa4.37□□□□□ -1.71
AC002546.1-201ENST00000588041 SHTN1A0MZ66 631 aa4.36□□□□□ -1.71
AC002546.1-201ENST00000588041 NPHP1O15259 732 aa4.36□□□□□ -1.71
AC002546.1-201ENST00000588041 TSPAN6O43657 245 aa4.36□□□□□ -1.71
AC002546.1-201ENST00000588041 SCGB1D2O95969 90 aa4.36□□□□□ -1.71
AC002546.1-201ENST00000588041 VIL1P09327 827 aaKnown RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms