RNA–Protein interactions for RNA: ENST00000587718.5

CAPNS1-204, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-204ENST00000587718 PDE4AP27815 886 aa32.47■■■□□ 2.79
CAPNS1-204ENST00000587718 ZNF428Q96B54 188 aa32.47■■■□□ 2.79
CAPNS1-204ENST00000587718 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP32.46■■■□□ 2.79
CAPNS1-204ENST00000587718 KLHL34Q8N239 644 aa32.46■■■□□ 2.79
CAPNS1-204ENST00000587718 UBR3Q6ZT12 1888 aa32.46■■■□□ 2.79
CAPNS1-204ENST00000587718 SSFA2P28290 1259 aa32.45■■■□□ 2.79
CAPNS1-204ENST00000587718 NLGN2Q8NFZ4 835 aa32.45■■■□□ 2.79
CAPNS1-204ENST00000587718 CLUAP1Q96AJ1 413 aa32.45■■■□□ 2.78
CAPNS1-204ENST00000587718 RIPK4P57078 832 aa32.44■■■□□ 2.78
CAPNS1-204ENST00000587718 CABP4P57796 275 aa32.44■■■□□ 2.78
CAPNS1-204ENST00000587718 C1orf141Q5JVX7 400 aa32.44■■■□□ 2.78
CAPNS1-204ENST00000587718 PHF14O94880 888 aa32.43■■■□□ 2.78
CAPNS1-204ENST00000587718 NFE2L2Q16236 605 aa32.41■■■□□ 2.78
CAPNS1-204ENST00000587718 GNPATO15228 680 aa32.4■■■□□ 2.78
CAPNS1-204ENST00000587718 NFATC2IPQ8NCF5 419 aa32.4■■■□□ 2.78
CAPNS1-204ENST00000587718 ZNF831Q5JPB2 1677 aa32.39■■■□□ 2.78
CAPNS1-204ENST00000587718 LMOD3Q0VAK6 560 aa32.39■■■□□ 2.78
CAPNS1-204ENST00000587718 RBM42Q9BTD8 480 aaKnown RBP32.39■■■□□ 2.78
CAPNS1-204ENST00000587718 GPR162Q16538 588 aa32.38■■■□□ 2.77
CAPNS1-204ENST00000587718 HMOX1P09601 288 aa32.37■■■□□ 2.77
CAPNS1-204ENST00000587718 PRKAR2BP31323 418 aa32.37■■■□□ 2.77
CAPNS1-204ENST00000587718 AKAP4Q5JQC9 854 aa32.37■■■□□ 2.77
CAPNS1-204ENST00000587718 ZKSCAN2Q63HK3 967 aa32.37■■■□□ 2.77
CAPNS1-204ENST00000587718 ERICH6Q7L0X2 663 aa32.36■■■□□ 2.77
CAPNS1-204ENST00000587718 IPO9Q96P70 1041 aaKnown RBP32.36■■■□□ 2.77
CAPNS1-204ENST00000587718 BRPF1P55201 1214 aaPredicted RBP32.36■■■□□ 2.77
CAPNS1-204ENST00000587718 ALDH1L2Q3SY69 923 aa32.36■■■□□ 2.77
CAPNS1-204ENST00000587718 CD2APQ9Y5K6 639 aa32.36■■■□□ 2.77
CAPNS1-204ENST00000587718 RC3H1Q5TC82 1133 aaKnown RBP32.35■■■□□ 2.77
CAPNS1-204ENST00000587718 EXOSC9Q06265 439 aaKnown RBP32.32■■■□□ 2.77
CAPNS1-204ENST00000587718 PANK1Q8TE04 598 aa32.32■■■□□ 2.77
CAPNS1-204ENST00000587718 FRAT1Q92837 279 aaPredicted RBP32.32■■■□□ 2.77
CAPNS1-204ENST00000587718 LGR6Q9HBX8 967 aa32.32■■■□□ 2.77
CAPNS1-204ENST00000587718 COG6Q9Y2V7 657 aa32.32■■■□□ 2.77
CAPNS1-204ENST00000587718 CNTNAP4Q9C0A0 1308 aa32.32■■■□□ 2.76
CAPNS1-204ENST00000587718 MTHFSDQ2M296 383 aaKnown RBP32.31■■■□□ 2.76
CAPNS1-204ENST00000587718 RTCBQ9Y3I0 505 aaKnown RBP32.31■■■□□ 2.76
CAPNS1-204ENST00000587718 KIF16BQ96L93 1317 aa32.3■■■□□ 2.76
CAPNS1-204ENST00000587718 PTCD1O75127 700 aaKnown RBP32.3■■■□□ 2.76
CAPNS1-204ENST00000587718 SCN11AQ9UI33 1791 aa32.3■■■□□ 2.76
CAPNS1-204ENST00000587718 YBX3P16989 372 aaKnown RBP eCLIP32.29■■■□□ 2.764e-7■■■□□ 18.5
CAPNS1-204ENST00000587718 COL5A3P25940 1745 aaPredicted RBP32.29■■■□□ 2.76
CAPNS1-204ENST00000587718 MVPQ14764 893 aaKnown RBP32.28■■■□□ 2.76
CAPNS1-204ENST00000587718 TRAPPC3LQ5T215 181 aa32.28■■■□□ 2.76
CAPNS1-204ENST00000587718 DZIP1LQ8IYY4 767 aaKnown RBP32.28■■■□□ 2.76
CAPNS1-204ENST00000587718 ZNF784Q8NCA9 323 aaPredicted RBP32.28■■■□□ 2.76
CAPNS1-204ENST00000587718 SLC52A2Q9HAB3 445 aa32.28■■■□□ 2.76
CAPNS1-204ENST00000587718 IFT57Q9NWB7 429 aa32.28■■■□□ 2.76
CAPNS1-204ENST00000587718 NOP58Q9Y2X3 529 aaKnown RBP32.28■■■□□ 2.76
CAPNS1-204ENST00000587718 GOLGB1Q14789 3259 aaKnown RBP32.28■■■□□ 2.76
CAPNS1-204ENST00000587718 IPO8O15397 1037 aaKnown RBP32.28■■■□□ 2.76
CAPNS1-204ENST00000587718 RNMTO43148 476 aaKnown RBP32.28■■■□□ 2.76
CAPNS1-204ENST00000587718 RPS6KA4O75676 772 aa32.28■■■□□ 2.76
CAPNS1-204ENST00000587718 GNAI1P63096 354 aa32.27■■■□□ 2.76
CAPNS1-204ENST00000587718 FAM161AQ3B820 660 aa32.27■■■□□ 2.76
CAPNS1-204ENST00000587718 ARHGEF1Q92888 912 aaKnown RBP32.27■■■□□ 2.76
CAPNS1-204ENST00000587718 TSR2Q969E8 191 aaKnown RBP32.27■■■□□ 2.76
CAPNS1-204ENST00000587718 CHD4Q14839 1912 aa32.26■■■□□ 2.76
CAPNS1-204ENST00000587718 ADRA2BP18089 450 aa32.26■■■□□ 2.75
CAPNS1-204ENST00000587718 SMC4Q9NTJ3 1288 aa32.26■■■□□ 2.75
CAPNS1-204ENST00000587718 MRC1P22897 1456 aa32.24■■■□□ 2.75
CAPNS1-204ENST00000587718 ZNF853P0CG23 659 aa32.24■■■□□ 2.75
CAPNS1-204ENST00000587718 ADAMTS7Q9UKP4 1686 aa32.22■■■□□ 2.75
CAPNS1-204ENST00000587718 RLBP1P12271 317 aa32.22■■■□□ 2.75
CAPNS1-204ENST00000587718 CRKLP46109 303 aaKnown RBP32.22■■■□□ 2.75
CAPNS1-204ENST00000587718 ATF7IPQ6VMQ6 1270 aa32.22■■■□□ 2.75
CAPNS1-204ENST00000587718 SSH1Q8WYL5 1049 aa32.22■■■□□ 2.75
CAPNS1-204ENST00000587718 RWDD1Q9H446 243 aaPredicted RBP32.22■■■□□ 2.75
CAPNS1-204ENST00000587718 DDX19BQ9UMR2 479 aa32.22■■■□□ 2.75
CAPNS1-204ENST00000587718 CICQ96RK0 1608 aaPredicted RBP32.22■■■□□ 2.75
CAPNS1-204ENST00000587718 MYH14Q7Z406 1995 aaKnown RBP32.21■■■□□ 2.75
CAPNS1-204ENST00000587718 GRIN3BO60391 1043 aa32.21■■■□□ 2.75
CAPNS1-204ENST00000587718 IGHDP01880 384 aa32.21■■■□□ 2.75
CAPNS1-204ENST00000587718 FTSJ3Q8IY81 847 aaKnown RBP32.21■■■□□ 2.75
CAPNS1-204ENST00000587718 NLGN1Q8N2Q7 840 aa32.21■■■□□ 2.75
CAPNS1-204ENST00000587718 MMP10P09238 476 aa32.2■■■□□ 2.75
CAPNS1-204ENST00000587718 PHACTR3Q96KR7 559 aa32.2■■■□□ 2.75
CAPNS1-204ENST00000587718 GYS1P13807 737 aa32.19■■■□□ 2.74
CAPNS1-204ENST00000587718 ARHGAP45Q92619 1136 aa32.19■■■□□ 2.74
CAPNS1-204ENST00000587718 CHMP4BQ9H444 224 aaKnown RBP32.19■■■□□ 2.74
CAPNS1-204ENST00000587718 TJP1Q07157 1748 aa32.18■■■□□ 2.74
CAPNS1-204ENST00000587718 RFC4P35249 363 aa32.18■■■□□ 2.74
CAPNS1-204ENST00000587718 SLC39A6Q13433 755 aa32.18■■■□□ 2.74
CAPNS1-204ENST00000587718 INTS5Q6P9B9 1019 aaKnown RBP32.17■■■□□ 2.74
CAPNS1-204ENST00000587718 DDRGK1Q96HY6 314 aa32.17■■■□□ 2.74
CAPNS1-204ENST00000587718 BCL2L13Q9BXK5 485 aa32.16■■■□□ 2.74
CAPNS1-204ENST00000587718 ZBTB47Q9UFB7 747 aaPredicted RBP32.16■■■□□ 2.74
CAPNS1-204ENST00000587718 CFAP44Q96MT7 982 aa32.15■■■□□ 2.74
CAPNS1-204ENST00000587718 DLG5Q8TDM6 1919 aa32.15■■■□□ 2.74
CAPNS1-204ENST00000587718 TRIM27P14373 513 aa32.15■■■□□ 2.74
CAPNS1-204ENST00000587718 DNAJC10Q8IXB1 793 aa32.15■■■□□ 2.74
CAPNS1-204ENST00000587718 IL17REQ8NFR9 667 aa32.13■■■□□ 2.73
CAPNS1-204ENST00000587718 VIRMAQ69YN4 1812 aaKnown RBP32.13■■■□□ 2.73
CAPNS1-204ENST00000587718 KCPQ6ZWJ8 1503 aa32.13■■■□□ 2.73
CAPNS1-204ENST00000587718 C8orf34Q49A92 452 aa32.12■■■□□ 2.73
CAPNS1-204ENST00000587718 GAS2L2Q8NHY3 880 aa32.12■■■□□ 2.73
CAPNS1-204ENST00000587718 PCDHB15Q9Y5E8 787 aa32.12■■■□□ 2.73
CAPNS1-204ENST00000587718 HDAC1Q13547 482 aaPredicted RBP32.11■■■□□ 2.73
CAPNS1-204ENST00000587718 C4AP0C0L4 1744 aa32.11■■■□□ 2.73
CAPNS1-204ENST00000587718 CYP19A1P11511 503 aaPredicted RBP32.11■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms