RNA–Protein interactions for RNA: ENST00000587463.5

RANBP3-210, Transcript of RAN binding protein 3, humanhuman

TSL 5

Gene RANBP3, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-210ENST00000587463 GOLGB1Q14789 3259 aaKnown RBP24.41■■□□□ 1.5
RANBP3-210ENST00000587463 MAPK8IP3Q9UPT6 1336 aa24.4■■□□□ 1.5
RANBP3-210ENST00000587463 SRP68Q9UHB9 627 aaKnown RBP24.4■■□□□ 1.5
RANBP3-210ENST00000587463 COL15A1P39059 1388 aa24.4■■□□□ 1.5
RANBP3-210ENST00000587463 TAF7Q15545 349 aaPredicted RBP24.39■■□□□ 1.49
RANBP3-210ENST00000587463 GPR162Q16538 588 aa24.38■■□□□ 1.49
RANBP3-210ENST00000587463 EIF5P55010 431 aaKnown RBP24.37■■□□□ 1.49
RANBP3-210ENST00000587463 FKBP8Q14318 412 aa24.37■■□□□ 1.49
RANBP3-210ENST00000587463 NARFQ9UHQ1 456 aa24.37■■□□□ 1.49
RANBP3-210ENST00000587463 ZPR1O75312 459 aa24.36■■□□□ 1.49
RANBP3-210ENST00000587463 YY1P25490 414 aa24.36■■□□□ 1.49
RANBP3-210ENST00000587463 C10orf71Q711Q0 1435 aa24.35■■□□□ 1.49
RANBP3-210ENST00000587463 CHD4Q14839 1912 aa24.35■■□□□ 1.49
RANBP3-210ENST00000587463 KDM3BQ7LBC6 1761 aa24.35■■□□□ 1.49
RANBP3-210ENST00000587463 PARP3Q9Y6F1 533 aa24.35■■□□□ 1.49
RANBP3-210ENST00000587463 CANXP27824 592 aaKnown RBP24.34■■□□□ 1.49
RANBP3-210ENST00000587463 TM4SF1P30408 202 aa24.34■■□□□ 1.49
RANBP3-210ENST00000587463 USPL1Q5W0Q7 1092 aa24.34■■□□□ 1.49
RANBP3-210ENST00000587463 PNISRQ8TF01 805 aaKnown RBP24.34■■□□□ 1.49
RANBP3-210ENST00000587463 KIAA1551Q9HCM1 1747 aa24.34■■□□□ 1.49
RANBP3-210ENST00000587463 A0A087WZG4 1122 aa24.33■■□□□ 1.49
RANBP3-210ENST00000587463 SNRPA1P09661 255 aaKnown RBP24.33■■□□□ 1.49
RANBP3-210ENST00000587463 YBX3P16989 372 aaKnown RBP eCLIP24.33■■□□□ 1.49
RANBP3-210ENST00000587463 IL6STP40189 918 aaPredicted RBP24.33■■□□□ 1.49
RANBP3-210ENST00000587463 ZNF316A6NFI3 1004 aaPredicted RBP24.32■■□□□ 1.48
RANBP3-210ENST00000587463 DDR1Q08345 913 aa24.32■■□□□ 1.48
RANBP3-210ENST00000587463 GRIN3BO60391 1043 aa24.31■■□□□ 1.48
RANBP3-210ENST00000587463 TGFB2P61812 414 aa24.31■■□□□ 1.48
RANBP3-210ENST00000587463 BCL2L12Q9HB09 334 aa24.31■■□□□ 1.48
RANBP3-210ENST00000587463 USP16Q9Y5T5 823 aa24.31■■□□□ 1.48
RANBP3-210ENST00000587463 A1BGP04217 495 aa24.3■■□□□ 1.48
RANBP3-210ENST00000587463 TMPOP42166 694 aaKnown RBP24.3■■□□□ 1.48
RANBP3-210ENST00000587463 RIPK4P57078 832 aa24.3■■□□□ 1.48
RANBP3-210ENST00000587463 WDR43Q15061 677 aaKnown RBP eCLIP24.3■■□□□ 1.48
RANBP3-210ENST00000587463 PELP1Q8IZL8 1130 aaKnown RBP24.3■■□□□ 1.48
RANBP3-210ENST00000587463 PXDNLA1KZ92 1463 aa24.3■■□□□ 1.48
RANBP3-210ENST00000587463 PRAMEF22A3QJZ6 481 aa24.29■■□□□ 1.48
RANBP3-210ENST00000587463 POLRMTO00411 1230 aaKnown RBP24.29■■□□□ 1.48
RANBP3-210ENST00000587463 THUMPD2Q9BTF0 503 aaKnown RBP24.29■■□□□ 1.48
RANBP3-210ENST00000587463 MIS18AQ9NYP9 233 aa24.29■■□□□ 1.48
RANBP3-210ENST00000587463 ADAMTS8Q9UP79 889 aa24.29■■□□□ 1.48
RANBP3-210ENST00000587463 SCN7AQ01118 1682 aa24.29■■□□□ 1.48
RANBP3-210ENST00000587463 NRXN2Q9P2S2 1712 aa24.28■■□□□ 1.48
RANBP3-210ENST00000587463 RUNDC1Q96C34 613 aa24.28■■□□□ 1.48
RANBP3-210ENST00000587463 LAMB4A4D0S4 1761 aa24.28■■□□□ 1.48
RANBP3-210ENST00000587463 LMOD3Q0VAK6 560 aa24.27■■□□□ 1.48
RANBP3-210ENST00000587463 NFIXQ14938 502 aa24.26■■□□□ 1.47
RANBP3-210ENST00000587463 N4BP2Q86UW6 1770 aaPredicted RBP24.26■■□□□ 1.47
RANBP3-210ENST00000587463 EIF4A1P60842 406 aaKnown RBP24.25■■□□□ 1.47
RANBP3-210ENST00000587463 CCDC146Q8IYE0 955 aa24.25■■□□□ 1.47
RANBP3-210ENST00000587463 BABAM1Q9NWV8 329 aa24.25■■□□□ 1.47
RANBP3-210ENST00000587463 AFDNP55196 1824 aaKnown RBP24.24■■□□□ 1.47
RANBP3-210ENST00000587463 BCORQ6W2J9 1755 aa24.24■■□□□ 1.47
RANBP3-210ENST00000587463 BRCA1P38398 1863 aaKnown RBP24.24■■□□□ 1.47
RANBP3-210ENST00000587463 GIGYF1O75420 1035 aaPredicted RBP24.23■■□□□ 1.47
RANBP3-210ENST00000587463 NBPF26B4DH59 902 aa24.22■■□□□ 1.47
RANBP3-210ENST00000587463 CAMTA2O94983 1202 aa24.22■■□□□ 1.47
RANBP3-210ENST00000587463 NBPF10Q6P3W6 841 aaKnown RBP24.22■■□□□ 1.47
RANBP3-210ENST00000587463 NBPF15Q8N660 670 aa24.22■■□□□ 1.47
RANBP3-210ENST00000587463 TBC1D2BQ9UPU7 963 aa24.22■■□□□ 1.47
RANBP3-210ENST00000587463 A0A0G2JLW4 131 aa24.21■■□□□ 1.47
RANBP3-210ENST00000587463 DPEP1P16444 411 aa24.21■■□□□ 1.47
RANBP3-210ENST00000587463 NPM2Q86SE8 214 aaKnown RBP24.21■■□□□ 1.47
RANBP3-210ENST00000587463 TRIM35Q9UPQ4 493 aa24.21■■□□□ 1.47
RANBP3-210ENST00000587463 RRP7AQ9Y3A4 280 aaKnown RBP24.21■■□□□ 1.47
RANBP3-210ENST00000587463 ZNF330Q9Y3S2 320 aaPredicted RBP24.21■■□□□ 1.47
RANBP3-210ENST00000587463 KCNA3P22001 575 aa24.2■■□□□ 1.46
RANBP3-210ENST00000587463 RGL2O15211 777 aa24.19■■□□□ 1.46
RANBP3-210ENST00000587463 SERPINB2P05120 415 aa24.19■■□□□ 1.46
RANBP3-210ENST00000587463 PIP4K2AP48426 406 aaPredicted RBP24.19■■□□□ 1.46
RANBP3-210ENST00000587463 TBC1D9BQ66K14 1250 aa24.19■■□□□ 1.46
RANBP3-210ENST00000587463 DZIP3Q86Y13 1208 aaKnown RBP24.19■■□□□ 1.46
RANBP3-210ENST00000587463 TSPYL4Q9UJ04 414 aa24.19■■□□□ 1.46
RANBP3-210ENST00000587463 NEUROD2Q15784 382 aa24.17■■□□□ 1.46
RANBP3-210ENST00000587463 CLEC4GQ6UXB4 293 aa24.17■■□□□ 1.46
RANBP3-210ENST00000587463 WWC3Q9ULE0 1092 aa24.16■■□□□ 1.46
RANBP3-210ENST00000587463 CARMIL3Q8ND23 1372 aa24.16■■□□□ 1.46
RANBP3-210ENST00000587463 ZNF784Q8NCA9 323 aaPredicted RBP24.15■■□□□ 1.46
RANBP3-210ENST00000587463 ARFGEF1Q9Y6D6 1849 aa24.14■■□□□ 1.46
RANBP3-210ENST00000587463 CHL1O00533 1208 aa24.14■■□□□ 1.45
RANBP3-210ENST00000587463 BICDL1Q6ZP65 573 aa24.14■■□□□ 1.45
RANBP3-210ENST00000587463 PIM2Q9P1W9 311 aa24.14■■□□□ 1.45
RANBP3-210ENST00000587463 ERBB4Q15303 1308 aa24.13■■□□□ 1.45
RANBP3-210ENST00000587463 CCDC184Q52MB2 194 aa24.13■■□□□ 1.45
RANBP3-210ENST00000587463 SETDB2Q96T68 719 aa24.13■■□□□ 1.45
RANBP3-210ENST00000587463 BCS1LQ9Y276 419 aa24.13■■□□□ 1.45
RANBP3-210ENST00000587463 DLEC1Q9Y238 1755 aa24.13■■□□□ 1.45
RANBP3-210ENST00000587463 ZNF652Q9Y2D9 606 aa24.12■■□□□ 1.45
RANBP3-210ENST00000587463 ANP32CO43423 234 aa24.11■■□□□ 1.45
RANBP3-210ENST00000587463 CHRNA5P30532 468 aa24.11■■□□□ 1.45
RANBP3-210ENST00000587463 APAF1O14727 1248 aa24.1■■□□□ 1.45
RANBP3-210ENST00000587463 PRR5LQ6MZQ0 368 aa24.1■■□□□ 1.45
RANBP3-210ENST00000587463 ANKRD31Q8N7Z5 1873 aa24.1■■□□□ 1.45
RANBP3-210ENST00000587463 DALRD3Q5D0E6 543 aaKnown RBP24.09■■□□□ 1.45
RANBP3-210ENST00000587463 ADCY9O60503 1353 aa24.08■■□□□ 1.45
RANBP3-210ENST00000587463 ERVV-1B6SEH8 477 aa24.08■■□□□ 1.45
RANBP3-210ENST00000587463 CFAP44Q96MT7 982 aa24.08■■□□□ 1.45
RANBP3-210ENST00000587463 BRIP1Q9BX63 1249 aa24.08■■□□□ 1.45
RANBP3-210ENST00000587463 PDZRN3Q9UPQ7 1066 aa24.08■■□□□ 1.45
RANBP3-210ENST00000587463 PDIA6Q15084 440 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms