RNA–Protein interactions for RNA: ENST00000587197.1

DNMT1-212, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-212ENST00000587197 CD2APQ9Y5K6 639 aa22.6■■□□□ 1.21
DNMT1-212ENST00000587197 COL5A3P25940 1745 aaPredicted RBP22.6■■□□□ 1.21
DNMT1-212ENST00000587197 CRKLP46109 303 aaKnown RBP22.59■■□□□ 1.21
DNMT1-212ENST00000587197 CALD1Q05682 793 aaKnown RBP22.59■■□□□ 1.21
DNMT1-212ENST00000587197 NLGN1Q8N2Q7 840 aa22.59■■□□□ 1.21
DNMT1-212ENST00000587197 ARHGEF1Q92888 912 aaKnown RBP22.58■■□□□ 1.21
DNMT1-212ENST00000587197 PELP1Q8IZL8 1130 aaKnown RBP22.57■■□□□ 1.2
DNMT1-212ENST00000587197 NLGN2Q8NFZ4 835 aa22.57■■□□□ 1.2
DNMT1-212ENST00000587197 FMNL2Q96PY5 1086 aa22.57■■□□□ 1.2
DNMT1-212ENST00000587197 KCPQ6ZWJ8 1503 aa22.57■■□□□ 1.2
DNMT1-212ENST00000587197 ZNF496Q96IT1 587 aaPredicted RBP22.56■■□□□ 1.2
DNMT1-212ENST00000587197 CICQ96RK0 1608 aaPredicted RBP22.56■■□□□ 1.2
DNMT1-212ENST00000587197 CHL1O00533 1208 aa22.55■■□□□ 1.2
DNMT1-212ENST00000587197 KCNQ3O43525 872 aa22.55■■□□□ 1.2
DNMT1-212ENST00000587197 WWC1Q8IX03 1113 aa22.55■■□□□ 1.2
DNMT1-212ENST00000587197 DNAJC10Q8IXB1 793 aa22.55■■□□□ 1.2
DNMT1-212ENST00000587197 HEG1Q9ULI3 1381 aa22.54■■□□□ 1.2
DNMT1-212ENST00000587197 CFAP44Q96MT7 982 aa22.54■■□□□ 1.2
DNMT1-212ENST00000587197 TEX13AQ9BXU3 409 aaPredicted RBP22.54■■□□□ 1.2
DNMT1-212ENST00000587197 CCDC87Q9NVE4 849 aa22.54■■□□□ 1.2
DNMT1-212ENST00000587197 MIS18AQ9NYP9 233 aa22.54■■□□□ 1.2
DNMT1-212ENST00000587197 TJP1Q07157 1748 aa22.54■■□□□ 1.2
DNMT1-212ENST00000587197 MMP10P09238 476 aa22.53■■□□□ 1.2
DNMT1-212ENST00000587197 ZNF853P0CG23 659 aa22.53■■□□□ 1.2
DNMT1-212ENST00000587197 TSPYL4Q9UJ04 414 aa22.53■■□□□ 1.2
DNMT1-212ENST00000587197 GRIN3BO60391 1043 aa22.52■■□□□ 1.2
DNMT1-212ENST00000587197 IFT57Q9NWB7 429 aa22.52■■□□□ 1.2
DNMT1-212ENST00000587197 UBR2Q8IWV8 1755 aa22.52■■□□□ 1.2
DNMT1-212ENST00000587197 MYH14Q7Z406 1995 aaKnown RBP22.52■■□□□ 1.2
DNMT1-212ENST00000587197 IL16Q14005 1332 aa22.52■■□□□ 1.2
DNMT1-212ENST00000587197 CYP19A1P11511 503 aaPredicted RBP22.51■■□□□ 1.19
DNMT1-212ENST00000587197 GYS1P13807 737 aa22.51■■□□□ 1.19
DNMT1-212ENST00000587197 EIF4A1P60842 406 aaKnown RBP22.51■■□□□ 1.19
DNMT1-212ENST00000587197 GNAI1P63096 354 aa22.51■■□□□ 1.19
DNMT1-212ENST00000587197 INTS5Q6P9B9 1019 aaKnown RBP22.51■■□□□ 1.19
DNMT1-212ENST00000587197 WDR63Q8IWG1 891 aa22.51■■□□□ 1.19
DNMT1-212ENST00000587197 STARD3NLO95772 234 aa22.5■■□□□ 1.19
DNMT1-212ENST00000587197 SNRPA1P09661 255 aaKnown RBP22.5■■□□□ 1.19
DNMT1-212ENST00000587197 PARP3Q9Y6F1 533 aa22.5■■□□□ 1.19
DNMT1-212ENST00000587197 ZPR1O75312 459 aa22.48■■□□□ 1.19
DNMT1-212ENST00000587197 USP42Q9H9J4 1324 aaKnown RBP22.48■■□□□ 1.19
DNMT1-212ENST00000587197 KDM3BQ7LBC6 1761 aa22.48■■□□□ 1.19
DNMT1-212ENST00000587197 SOS1Q07889 1333 aaPredicted RBP22.47■■□□□ 1.19
DNMT1-212ENST00000587197 SENP3-EIF4A1A0A087X0R7 540 aa22.46■■□□□ 1.19
DNMT1-212ENST00000587197 GIGYF1O75420 1035 aaPredicted RBP22.46■■□□□ 1.19
DNMT1-212ENST00000587197 SALL2Q9Y467 1007 aaPredicted RBP22.46■■□□□ 1.19
DNMT1-212ENST00000587197 LAS1LQ9Y4W2 734 aaKnown RBP22.46■■□□□ 1.19
DNMT1-212ENST00000587197 CHD4Q14839 1912 aa22.46■■□□□ 1.19
DNMT1-212ENST00000587197 ZNF521Q96K83 1311 aa22.46■■□□□ 1.19
DNMT1-212ENST00000587197 C4AP0C0L4 1744 aa22.45■■□□□ 1.19
DNMT1-212ENST00000587197 MBIPQ9NS73 344 aa22.45■■□□□ 1.18
DNMT1-212ENST00000587197 ZBTB1Q9Y2K1 713 aa22.45■■□□□ 1.18
DNMT1-212ENST00000587197 SRP68Q9UHB9 627 aaKnown RBP22.44■■□□□ 1.18
DNMT1-212ENST00000587197 COL15A1P39059 1388 aa22.43■■□□□ 1.18
DNMT1-212ENST00000587197 A0A087WZG4 1122 aa22.43■■□□□ 1.18
DNMT1-212ENST00000587197 YBX3P16989 372 aaKnown RBP eCLIP22.43■■□□□ 1.18
DNMT1-212ENST00000587197 CANXP27824 592 aaKnown RBP22.43■■□□□ 1.18
DNMT1-212ENST00000587197 TGFB2P61812 414 aa22.43■■□□□ 1.18
DNMT1-212ENST00000587197 NPM2Q86SE8 214 aaKnown RBP22.43■■□□□ 1.18
DNMT1-212ENST00000587197 NARFQ9UHQ1 456 aa22.43■■□□□ 1.18
DNMT1-212ENST00000587197 FKBP8Q14318 412 aa22.42■■□□□ 1.18
DNMT1-212ENST00000587197 USPL1Q5W0Q7 1092 aa22.42■■□□□ 1.18
DNMT1-212ENST00000587197 USP16Q9Y5T5 823 aa22.42■■□□□ 1.18
DNMT1-212ENST00000587197 HOXB7P09629 217 aa22.41■■□□□ 1.18
DNMT1-212ENST00000587197 PRAMEF22A3QJZ6 481 aa22.4■■□□□ 1.18
DNMT1-212ENST00000587197 C10orf71Q711Q0 1435 aa22.39■■□□□ 1.17
DNMT1-212ENST00000587197 EIF5P55010 431 aaKnown RBP22.38■■□□□ 1.17
DNMT1-212ENST00000587197 TM4SF1P30408 202 aa22.37■■□□□ 1.17
DNMT1-212ENST00000587197 IL6STP40189 918 aaPredicted RBP22.37■■□□□ 1.17
DNMT1-212ENST00000587197 ZNF784Q8NCA9 323 aaPredicted RBP22.37■■□□□ 1.17
DNMT1-212ENST00000587197 KIF13BQ9NQT8 1826 aa22.36■■□□□ 1.17
DNMT1-212ENST00000587197 ERBB4Q15303 1308 aa22.36■■□□□ 1.17
DNMT1-212ENST00000587197 A1BGP04217 495 aa22.36■■□□□ 1.17
DNMT1-212ENST00000587197 GOLGA2Q08379 1002 aa22.36■■□□□ 1.17
DNMT1-212ENST00000587197 MYH16Q9H6N6 1097 aa22.36■■□□□ 1.17
DNMT1-212ENST00000587197 ZNF330Q9Y3S2 320 aaPredicted RBP22.36■■□□□ 1.17
DNMT1-212ENST00000587197 DDR1Q08345 913 aa22.35■■□□□ 1.17
DNMT1-212ENST00000587197 KRT24Q2M2I5 525 aa22.35■■□□□ 1.17
DNMT1-212ENST00000587197 DUSP27Q5VZP5 1158 aa22.35■■□□□ 1.17
DNMT1-212ENST00000587197 TSR2Q969E8 191 aaKnown RBP22.35■■□□□ 1.17
DNMT1-212ENST00000587197 CHMP4AQ9BY43 222 aa22.35■■□□□ 1.17
DNMT1-212ENST00000587197 SPINK5Q9NQ38 1064 aaPredicted RBP22.35■■□□□ 1.17
DNMT1-212ENST00000587197 PXDNLA1KZ92 1463 aa22.34■■□□□ 1.17
DNMT1-212ENST00000587197 FANCIQ9NVI1 1328 aa22.34■■□□□ 1.17
DNMT1-212ENST00000587197 A0A0G2JLW4 131 aa22.34■■□□□ 1.17
DNMT1-212ENST00000587197 E9PSI1 815 aa22.34■■□□□ 1.17
DNMT1-212ENST00000587197 POLRMTO00411 1230 aaKnown RBP22.34■■□□□ 1.17
DNMT1-212ENST00000587197 WWC3Q9ULE0 1092 aa22.34■■□□□ 1.17
DNMT1-212ENST00000587197 NFIXQ14938 502 aa22.33■■□□□ 1.17
DNMT1-212ENST00000587197 C8orf58Q8NAV2 365 aa22.33■■□□□ 1.17
DNMT1-212ENST00000587197 NBPF26B4DH59 902 aa22.32■■□□□ 1.16
DNMT1-212ENST00000587197 DPEP1P16444 411 aa22.32■■□□□ 1.16
DNMT1-212ENST00000587197 HNRNPUQ00839 825 aaKnown RBP eCLIP22.32■■□□□ 1.16
DNMT1-212ENST00000587197 NBPF10Q6P3W6 841 aaKnown RBP22.32■■□□□ 1.16
DNMT1-212ENST00000587197 NBPF15Q8N660 670 aa22.32■■□□□ 1.16
DNMT1-212ENST00000587197 BCS1LQ9Y276 419 aa22.32■■□□□ 1.16
DNMT1-212ENST00000587197 SLFN5Q08AF3 891 aa22.31■■□□□ 1.16
DNMT1-212ENST00000587197 BCL2L12Q9HB09 334 aa22.31■■□□□ 1.16
DNMT1-212ENST00000587197 LAMB4A4D0S4 1761 aa22.3■■□□□ 1.16
DNMT1-212ENST00000587197 SERPINB2P05120 415 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms