RNA–Protein interactions for RNA: ENST00000586118.5

MBD1-213, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 3

Gene MBD1, Length 1,012 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-213ENST00000586118 MCM10Q7L590 875 aa23.04■■□□□ 1.28
MBD1-213ENST00000586118 TEX13AQ9BXU3 409 aaPredicted RBP23.04■■□□□ 1.28
MBD1-213ENST00000586118 YBX3P16989 372 aaKnown RBP eCLIP23.02■■□□□ 1.28
MBD1-213ENST00000586118 MYBBP1AQ9BQG0 1328 aaKnown RBP23.02■■□□□ 1.28
MBD1-213ENST00000586118 C10orf71Q711Q0 1435 aa23.01■■□□□ 1.27
MBD1-213ENST00000586118 CANXP27824 592 aaKnown RBP23.01■■□□□ 1.27
MBD1-213ENST00000586118 CHD4Q14839 1912 aa23■■□□□ 1.27
MBD1-213ENST00000586118 FKBP8Q14318 412 aa23■■□□□ 1.27
MBD1-213ENST00000586118 USPL1Q5W0Q7 1092 aa23■■□□□ 1.27
MBD1-213ENST00000586118 DCTN1Q14203 1278 aa22.99■■□□□ 1.27
MBD1-213ENST00000586118 NPM2Q86SE8 214 aaKnown RBP22.99■■□□□ 1.27
MBD1-213ENST00000586118 NARFQ9UHQ1 456 aa22.99■■□□□ 1.27
MBD1-213ENST00000586118 A0A087WZG4 1122 aa22.98■■□□□ 1.27
MBD1-213ENST00000586118 NFE2L2Q16236 605 aa22.98■■□□□ 1.27
MBD1-213ENST00000586118 ZNF330Q9Y3S2 320 aaPredicted RBP22.98■■□□□ 1.27
MBD1-213ENST00000586118 ZNF316A6NFI3 1004 aaPredicted RBP22.97■■□□□ 1.27
MBD1-213ENST00000586118 TGFB2P61812 414 aa22.97■■□□□ 1.27
MBD1-213ENST00000586118 PLEKHF1Q96S99 279 aa22.97■■□□□ 1.27
MBD1-213ENST00000586118 WWC3Q9ULE0 1092 aa22.97■■□□□ 1.27
MBD1-213ENST00000586118 PXDNLA1KZ92 1463 aa22.97■■□□□ 1.27
MBD1-213ENST00000586118 KCNQ3O43525 872 aa22.96■■□□□ 1.27
MBD1-213ENST00000586118 DDR1Q08345 913 aa22.95■■□□□ 1.26
MBD1-213ENST00000586118 TAF7Q15545 349 aaPredicted RBP22.95■■□□□ 1.26
MBD1-213ENST00000586118 EIF5P55010 431 aaKnown RBP22.94■■□□□ 1.26
MBD1-213ENST00000586118 ZNF784Q8NCA9 323 aaPredicted RBP22.94■■□□□ 1.26
MBD1-213ENST00000586118 KIF13BQ9NQT8 1826 aa22.94■■□□□ 1.26
MBD1-213ENST00000586118 POLRMTO00411 1230 aaKnown RBP22.93■■□□□ 1.26
MBD1-213ENST00000586118 SNRPA1P09661 255 aaKnown RBP22.93■■□□□ 1.26
MBD1-213ENST00000586118 IL6STP40189 918 aaPredicted RBP22.93■■□□□ 1.26
MBD1-213ENST00000586118 PNISRQ8TF01 805 aaKnown RBP22.93■■□□□ 1.26
MBD1-213ENST00000586118 WDR43Q15061 677 aaKnown RBP eCLIP22.92■■□□□ 1.26
MBD1-213ENST00000586118 A0A0G2JLW4 131 aa22.91■■□□□ 1.26
MBD1-213ENST00000586118 TM4SF1P30408 202 aa22.91■■□□□ 1.26
MBD1-213ENST00000586118 A1BGP04217 495 aa22.9■■□□□ 1.26
MBD1-213ENST00000586118 DPEP1P16444 411 aa22.9■■□□□ 1.26
MBD1-213ENST00000586118 NFIXQ14938 502 aa22.9■■□□□ 1.26
MBD1-213ENST00000586118 LMOD3Q0VAK6 560 aa22.89■■□□□ 1.25
MBD1-213ENST00000586118 BCS1LQ9Y276 419 aa22.89■■□□□ 1.25
MBD1-213ENST00000586118 DLG5Q8TDM6 1919 aa22.88■■□□□ 1.25
MBD1-213ENST00000586118 PRKRIP1Q9H875 184 aaPredicted RBP22.88■■□□□ 1.25
MBD1-213ENST00000586118 BCL2L12Q9HB09 334 aa22.88■■□□□ 1.25
MBD1-213ENST00000586118 MIS18AQ9NYP9 233 aa22.88■■□□□ 1.25
MBD1-213ENST00000586118 TBC1D2BQ9UPU7 963 aa22.88■■□□□ 1.25
MBD1-213ENST00000586118 USP16Q9Y5T5 823 aa22.88■■□□□ 1.25
MBD1-213ENST00000586118 KIAA1551Q9HCM1 1747 aa22.88■■□□□ 1.25
MBD1-213ENST00000586118 SCN7AQ01118 1682 aa22.87■■□□□ 1.25
MBD1-213ENST00000586118 N4BP2Q86UW6 1770 aaPredicted RBP22.87■■□□□ 1.25
MBD1-213ENST00000586118 PRAMEF22A3QJZ6 481 aa22.87■■□□□ 1.25
MBD1-213ENST00000586118 BICDL1Q6ZP65 573 aa22.87■■□□□ 1.25
MBD1-213ENST00000586118 THUMPD2Q9BTF0 503 aaKnown RBP22.87■■□□□ 1.25
MBD1-213ENST00000586118 SERPINB2P05120 415 aa22.86■■□□□ 1.25
MBD1-213ENST00000586118 RIPK4P57078 832 aa22.86■■□□□ 1.25
MBD1-213ENST00000586118 DZIP3Q86Y13 1208 aaKnown RBP22.86■■□□□ 1.25
MBD1-213ENST00000586118 PIM2Q9P1W9 311 aa22.85■■□□□ 1.25
MBD1-213ENST00000586118 PIP4K2AP48426 406 aaPredicted RBP22.84■■□□□ 1.25
MBD1-213ENST00000586118 CCDC146Q8IYE0 955 aa22.84■■□□□ 1.25
MBD1-213ENST00000586118 TMPOP42166 694 aaKnown RBP22.83■■□□□ 1.25
MBD1-213ENST00000586118 TBC1D9BQ66K14 1250 aa22.83■■□□□ 1.25
MBD1-213ENST00000586118 CARMIL3Q8ND23 1372 aa22.83■■□□□ 1.25
MBD1-213ENST00000586118 KDM3BQ7LBC6 1761 aa22.82■■□□□ 1.24
MBD1-213ENST00000586118 NPHP1O15259 732 aa22.82■■□□□ 1.24
MBD1-213ENST00000586118 CAMTA2O94983 1202 aa22.82■■□□□ 1.24
MBD1-213ENST00000586118 DALRD3Q5D0E6 543 aaKnown RBP22.82■■□□□ 1.24
MBD1-213ENST00000586118 RUNDC1Q96C34 613 aa22.82■■□□□ 1.24
MBD1-213ENST00000586118 TSPYL4Q9UJ04 414 aa22.82■■□□□ 1.24
MBD1-213ENST00000586118 ZNF652Q9Y2D9 606 aa22.82■■□□□ 1.24
MBD1-213ENST00000586118 LAMB4A4D0S4 1761 aa22.81■■□□□ 1.24
MBD1-213ENST00000586118 CHRNA5P30532 468 aa22.81■■□□□ 1.24
MBD1-213ENST00000586118 EIF4A1P60842 406 aaKnown RBP22.81■■□□□ 1.24
MBD1-213ENST00000586118 NRXN2Q9P2S2 1712 aa22.8■■□□□ 1.24
MBD1-213ENST00000586118 KCNA3P22001 575 aa22.8■■□□□ 1.24
MBD1-213ENST00000586118 SETDB2Q96T68 719 aa22.8■■□□□ 1.24
MBD1-213ENST00000586118 RRP7AQ9Y3A4 280 aaKnown RBP22.8■■□□□ 1.24
MBD1-213ENST00000586118 ATP10DQ9P241 1426 aa22.8■■□□□ 1.24
MBD1-213ENST00000586118 GIGYF1O75420 1035 aaPredicted RBP22.79■■□□□ 1.24
MBD1-213ENST00000586118 NEUROD2Q15784 382 aa22.79■■□□□ 1.24
MBD1-213ENST00000586118 ARHGAP27Q6ZUM4 889 aa22.79■■□□□ 1.24
MBD1-213ENST00000586118 AFDNP55196 1824 aaKnown RBP22.79■■□□□ 1.24
MBD1-213ENST00000586118 BCORQ6W2J9 1755 aa22.78■■□□□ 1.24
MBD1-213ENST00000586118 NBPF26B4DH59 902 aa22.78■■□□□ 1.24
MBD1-213ENST00000586118 NBPF10Q6P3W6 841 aaKnown RBP22.78■■□□□ 1.24
MBD1-213ENST00000586118 NBPF15Q8N660 670 aa22.78■■□□□ 1.24
MBD1-213ENST00000586118 ADAMTS8Q9UP79 889 aa22.78■■□□□ 1.24
MBD1-213ENST00000586118 BRCA1P38398 1863 aaKnown RBP22.77■■□□□ 1.24
MBD1-213ENST00000586118 CLEC4GQ6UXB4 293 aa22.77■■□□□ 1.24
MBD1-213ENST00000586118 CNBD1Q8NA66 436 aa22.77■■□□□ 1.24
MBD1-213ENST00000586118 BABAM1Q9NWV8 329 aa22.77■■□□□ 1.24
MBD1-213ENST00000586118 ADCY9O60503 1353 aa22.76■■□□□ 1.23
MBD1-213ENST00000586118 H0YIN7 160 aa22.76■■□□□ 1.23
MBD1-213ENST00000586118 RGL2O15211 777 aa22.75■■□□□ 1.23
MBD1-213ENST00000586118 PDE6BP35913 854 aa22.75■■□□□ 1.23
MBD1-213ENST00000586118 ST5P78524 1137 aa22.75■■□□□ 1.23
MBD1-213ENST00000586118 C2CD5Q86YS7 1000 aa22.75■■□□□ 1.23
MBD1-213ENST00000586118 PDZRN3Q9UPQ7 1066 aa22.75■■□□□ 1.23
MBD1-213ENST00000586118 PRR5LQ6MZQ0 368 aa22.74■■□□□ 1.23
MBD1-213ENST00000586118 ARFGEF1Q9Y6D6 1849 aa22.73■■□□□ 1.23
MBD1-213ENST00000586118 KIF6Q6ZMV9 814 aa22.73■■□□□ 1.23
MBD1-213ENST00000586118 NBPF5PQ86XG9 351 aaPredicted RBP22.73■■□□□ 1.23
MBD1-213ENST00000586118 NGEFQ8N5V2 710 aa22.73■■□□□ 1.23
MBD1-213ENST00000586118 BRIP1Q9BX63 1249 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms