RNA–Protein interactions for RNA: ENST00000585900.1

HMG20B-216, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-216ENST00000585900 ZNF496Q96IT1 587 aaPredicted RBP24.19■■□□□ 1.46
HMG20B-216ENST00000585900 FMNL2Q96PY5 1086 aa24.19■■□□□ 1.46
HMG20B-216ENST00000585900 BTBD11A6QL63 1104 aa24.18■■□□□ 1.46
HMG20B-216ENST00000585900 USPL1Q5W0Q7 1092 aa24.18■■□□□ 1.46
HMG20B-216ENST00000585900 SIPA1L3O60292 1781 aaPredicted RBP24.17■■□□□ 1.46
HMG20B-216ENST00000585900 CANXP27824 592 aaKnown RBP24.17■■□□□ 1.46
HMG20B-216ENST00000585900 NARFQ9UHQ1 456 aa24.17■■□□□ 1.46
HMG20B-216ENST00000585900 A0A087WZG4 1122 aa24.15■■□□□ 1.46
HMG20B-216ENST00000585900 A0A0G2JLW4 131 aa24.15■■□□□ 1.46
HMG20B-216ENST00000585900 DDR1Q08345 913 aa24.15■■□□□ 1.46
HMG20B-216ENST00000585900 NPM2Q86SE8 214 aaKnown RBP24.15■■□□□ 1.46
HMG20B-216ENST00000585900 HTATSF1O43719 755 aaKnown RBP24.14■■□□□ 1.45
HMG20B-216ENST00000585900 MCM10Q7L590 875 aa24.14■■□□□ 1.45
HMG20B-216ENST00000585900 BCS1LQ9Y276 419 aa24.14■■□□□ 1.45
HMG20B-216ENST00000585900 DPEP1P16444 411 aa24.13■■□□□ 1.45
HMG20B-216ENST00000585900 POLRMTO00411 1230 aaKnown RBP24.12■■□□□ 1.45
HMG20B-216ENST00000585900 TM4SF1P30408 202 aa24.12■■□□□ 1.45
HMG20B-216ENST00000585900 PNNQ9H307 717 aaKnown RBP24.12■■□□□ 1.45
HMG20B-216ENST00000585900 ZNF330Q9Y3S2 320 aaPredicted RBP24.12■■□□□ 1.45
HMG20B-216ENST00000585900 KIAA1551Q9HCM1 1747 aa24.12■■□□□ 1.45
HMG20B-216ENST00000585900 N4BP2Q86UW6 1770 aaPredicted RBP24.11■■□□□ 1.45
HMG20B-216ENST00000585900 GIGYF1O75420 1035 aaPredicted RBP24.11■■□□□ 1.45
HMG20B-216ENST00000585900 RALBP1Q15311 655 aa24.11■■□□□ 1.45
HMG20B-216ENST00000585900 ATP10DQ9P241 1426 aa24.1■■□□□ 1.45
HMG20B-216ENST00000585900 EIF5P55010 431 aaKnown RBP24.1■■□□□ 1.45
HMG20B-216ENST00000585900 IL6STP40189 918 aaPredicted RBP24.09■■□□□ 1.45
HMG20B-216ENST00000585900 NFIXQ14938 502 aa24.09■■□□□ 1.45
HMG20B-216ENST00000585900 MAPK8IP3Q9UPT6 1336 aa24.09■■□□□ 1.45
HMG20B-216ENST00000585900 KCNQ3O43525 872 aa24.08■■□□□ 1.45
HMG20B-216ENST00000585900 DCTN1Q14203 1278 aa24.08■■□□□ 1.45
HMG20B-216ENST00000585900 PIM2Q9P1W9 311 aa24.08■■□□□ 1.45
HMG20B-216ENST00000585900 ADCY9O60503 1353 aa24.07■■□□□ 1.44
HMG20B-216ENST00000585900 SNRPA1P09661 255 aaKnown RBP24.06■■□□□ 1.44
HMG20B-216ENST00000585900 DDX10Q13206 875 aaKnown RBP24.06■■□□□ 1.44
HMG20B-216ENST00000585900 BCL2L12Q9HB09 334 aa24.06■■□□□ 1.44
HMG20B-216ENST00000585900 SERPINB2P05120 415 aa24.05■■□□□ 1.44
HMG20B-216ENST00000585900 DALRD3Q5D0E6 543 aaKnown RBP24.05■■□□□ 1.44
HMG20B-216ENST00000585900 GPBP1L1Q9HC44 474 aaPredicted RBP24.05■■□□□ 1.44
HMG20B-216ENST00000585900 A1BGP04217 495 aa24.04■■□□□ 1.44
HMG20B-216ENST00000585900 C1QTNF8P60827 252 aa24.04■■□□□ 1.44
HMG20B-216ENST00000585900 TAF7Q15545 349 aaPredicted RBP24.04■■□□□ 1.44
HMG20B-216ENST00000585900 BICDL1Q6ZP65 573 aa24.04■■□□□ 1.44
HMG20B-216ENST00000585900 ARHGAP27Q6ZUM4 889 aa24.04■■□□□ 1.44
HMG20B-216ENST00000585900 SCN7AQ01118 1682 aa24.04■■□□□ 1.44
HMG20B-216ENST00000585900 KCNA3P22001 575 aa24.03■■□□□ 1.44
HMG20B-216ENST00000585900 NFE2L2Q16236 605 aa24.03■■□□□ 1.44
HMG20B-216ENST00000585900 PNISRQ8TF01 805 aaKnown RBP24.03■■□□□ 1.44
HMG20B-216ENST00000585900 PLEKHF1Q96S99 279 aa24.03■■□□□ 1.44
HMG20B-216ENST00000585900 TBC1D2BQ9UPU7 963 aa24.03■■□□□ 1.44
HMG20B-216ENST00000585900 CHRNA5P30532 468 aa24.02■■□□□ 1.44
HMG20B-216ENST00000585900 BRCA1P38398 1863 aaKnown RBP24.02■■□□□ 1.44
HMG20B-216ENST00000585900 ZNF526Q8TF50 670 aaPredicted RBP24.01■■□□□ 1.43
HMG20B-216ENST00000585900 USP16Q9Y5T5 823 aa24.01■■□□□ 1.43
HMG20B-216ENST00000585900 MYBBP1AQ9BQG0 1328 aaKnown RBP24.01■■□□□ 1.43
HMG20B-216ENST00000585900 NRXN2Q9P2S2 1712 aa24.01■■□□□ 1.43
HMG20B-216ENST00000585900 DZIP3Q86Y13 1208 aaKnown RBP24■■□□□ 1.43
HMG20B-216ENST00000585900 CARMIL3Q8ND23 1372 aa24■■□□□ 1.43
HMG20B-216ENST00000585900 TBC1D9BQ66K14 1250 aa23.99■■□□□ 1.43
HMG20B-216ENST00000585900 AFDNP55196 1824 aaKnown RBP23.98■■□□□ 1.43
HMG20B-216ENST00000585900 PRAMEF22A3QJZ6 481 aa23.98■■□□□ 1.43
HMG20B-216ENST00000585900 NPHP1O15259 732 aa23.98■■□□□ 1.43
HMG20B-216ENST00000585900 ARFGEF1Q9Y6D6 1849 aa23.98■■□□□ 1.43
HMG20B-216ENST00000585900 CAMTA2O94983 1202 aa23.97■■□□□ 1.43
HMG20B-216ENST00000585900 SETDB2Q96T68 719 aa23.97■■□□□ 1.43
HMG20B-216ENST00000585900 MIS18AQ9NYP9 233 aa23.97■■□□□ 1.43
HMG20B-216ENST00000585900 ZNF652Q9Y2D9 606 aa23.97■■□□□ 1.43
HMG20B-216ENST00000585900 PIP4K2AP48426 406 aaPredicted RBP23.96■■□□□ 1.43
HMG20B-216ENST00000585900 DLG5Q8TDM6 1919 aa23.96■■□□□ 1.43
HMG20B-216ENST00000585900 SENP3-EIF4A1A0A087X0R7 540 aa23.95■■□□□ 1.42
HMG20B-216ENST00000585900 H0YIN7 160 aa23.95■■□□□ 1.42
HMG20B-216ENST00000585900 C2CD5Q86YS7 1000 aa23.95■■□□□ 1.42
HMG20B-216ENST00000585900 CNBD1Q8NA66 436 aa23.94■■□□□ 1.42
HMG20B-216ENST00000585900 THUMPD2Q9BTF0 503 aaKnown RBP23.94■■□□□ 1.42
HMG20B-216ENST00000585900 PDZRN3Q9UPQ7 1066 aa23.94■■□□□ 1.42
HMG20B-216ENST00000585900 BCORQ6W2J9 1755 aa23.93■■□□□ 1.42
HMG20B-216ENST00000585900 PDE6BP35913 854 aa23.93■■□□□ 1.42
HMG20B-216ENST00000585900 LMOD3Q0VAK6 560 aa23.93■■□□□ 1.42
HMG20B-216ENST00000585900 CLEC4GQ6UXB4 293 aa23.93■■□□□ 1.42
HMG20B-216ENST00000585900 ST5P78524 1137 aa23.92■■□□□ 1.42
HMG20B-216ENST00000585900 WDR43Q15061 677 aaKnown RBP eCLIP23.92■■□□□ 1.42
HMG20B-216ENST00000585900 PRR5LQ6MZQ0 368 aa23.92■■□□□ 1.42
HMG20B-216ENST00000585900 TTLL6Q8N841 843 aa23.92■■□□□ 1.42
HMG20B-216ENST00000585900 BRIP1Q9BX63 1249 aa23.92■■□□□ 1.42
HMG20B-216ENST00000585900 LAMB4A4D0S4 1761 aa23.92■■□□□ 1.42
HMG20B-216ENST00000585900 KDM3BQ7LBC6 1761 aa23.92■■□□□ 1.42
HMG20B-216ENST00000585900 RIPK4P57078 832 aa23.91■■□□□ 1.42
HMG20B-216ENST00000585900 C9orf131Q5VYM1 1079 aa23.91■■□□□ 1.42
HMG20B-216ENST00000585900 DLEC1Q9Y238 1755 aa23.91■■□□□ 1.42
HMG20B-216ENST00000585900 NBPF26B4DH59 902 aa23.9■■□□□ 1.42
HMG20B-216ENST00000585900 RGL2O15211 777 aa23.9■■□□□ 1.42
HMG20B-216ENST00000585900 NBPF10Q6P3W6 841 aaKnown RBP23.9■■□□□ 1.42
HMG20B-216ENST00000585900 NBPF15Q8N660 670 aa23.9■■□□□ 1.42
HMG20B-216ENST00000585900 EIF4A1P60842 406 aaKnown RBP23.89■■□□□ 1.41
HMG20B-216ENST00000585900 RNF181Q9P0P0 153 aa23.89■■□□□ 1.41
HMG20B-216ENST00000585900 TSPYL4Q9UJ04 414 aa23.89■■□□□ 1.41
HMG20B-216ENST00000585900 NBPF5PQ86XG9 351 aaPredicted RBP23.88■■□□□ 1.41
HMG20B-216ENST00000585900 ZNF622Q969S3 477 aaKnown RBP eCLIP23.88■■□□□ 1.41
HMG20B-216ENST00000585900 TMPOP42166 694 aaKnown RBP23.87■■□□□ 1.41
HMG20B-216ENST00000585900 CCDC24Q8N4L8 307 aa23.87■■□□□ 1.41
HMG20B-216ENST00000585900 CCDC146Q8IYE0 955 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms