RNA–Protein interactions for RNA: ENST00000583908.1

NARF-222, Transcript of nuclear prelamin A recognition factor, human

TSL 3

Gene NARF, Length 430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NARF-222	ENST00000583908	KDM3B	Q7LBC6	1761 aa		12.91	□□□□□ -0.34
NARF-222	ENST00000583908	ZPR1	O75312	459 aa		12.9	□□□□□ -0.34
NARF-222	ENST00000583908	FAM9B	Q8IZU0	186 aa		12.9	□□□□□ -0.34
NARF-222	ENST00000583908	ARX	Q96QS3	562 aa		12.9	□□□□□ -0.34
NARF-222	ENST00000583908	CHMP4A	Q9BY43	222 aa		12.9	□□□□□ -0.34
NARF-222	ENST00000583908	PDGFD	Q9GZP0	370 aa	Predicted RBP	12.9	□□□□□ -0.34
NARF-222	ENST00000583908	LAS1L	Q9Y4W2	734 aa	Known RBP	12.9	□□□□□ -0.34
NARF-222	ENST00000583908	COL15A1	P39059	1388 aa		12.9	□□□□□ -0.34
NARF-222	ENST00000583908	SOS1	Q07889	1333 aa	Predicted RBP	12.89	□□□□□ -0.35
NARF-222	ENST00000583908	DCAF8L1	A6NGE4	600 aa		12.89	□□□□□ -0.35
NARF-222	ENST00000583908	CCDC27	Q2M243	656 aa		12.89	□□□□□ -0.35
NARF-222	ENST00000583908	CCDC184	Q52MB2	194 aa		12.89	□□□□□ -0.35
NARF-222	ENST00000583908	NLGN1	Q8N2Q7	840 aa		12.89	□□□□□ -0.35
NARF-222	ENST00000583908	LAMB4	A4D0S4	1761 aa		12.89	□□□□□ -0.35
NARF-222	ENST00000583908	CANX	P27824	592 aa	Known RBP	12.88	□□□□□ -0.35
NARF-222	ENST00000583908	IL6ST	P40189	918 aa	Predicted RBP	12.88	□□□□□ -0.35
NARF-222	ENST00000583908	GNAI1	P63096	354 aa		12.88	□□□□□ -0.35
NARF-222	ENST00000583908	INTS5	Q6P9B9	1019 aa	Known RBP	12.88	□□□□□ -0.35
NARF-222	ENST00000583908	ARHGEF1	Q92888	912 aa	Known RBP	12.88	□□□□□ -0.35
NARF-222	ENST00000583908	CFAP44	Q96MT7	982 aa		12.88	□□□□□ -0.35
NARF-222	ENST00000583908	IFT57	Q9NWB7	429 aa		12.88	□□□□□ -0.35
NARF-222	ENST00000583908	TRIM35	Q9UPQ4	493 aa		12.88	□□□□□ -0.35
NARF-222	ENST00000583908	ZBTB1	Q9Y2K1	713 aa		12.88	□□□□□ -0.35
NARF-222	ENST00000583908	ZNF330	Q9Y3S2	320 aa	Predicted RBP	12.88	□□□□□ -0.35
NARF-222	ENST00000583908	ERBB4	Q15303	1308 aa		12.88	□□□□□ -0.35
NARF-222	ENST00000583908	USP42	Q9H9J4	1324 aa	Known RBP	12.88	□□□□□ -0.35
NARF-222	ENST00000583908	KCNQ3	O43525	872 aa		12.87	□□□□□ -0.35
NARF-222	ENST00000583908	PTGER2	P43116	358 aa		12.87	□□□□□ -0.35
NARF-222	ENST00000583908	EIF4A1	P60842	406 aa	Known RBP	12.87	□□□□□ -0.35
NARF-222	ENST00000583908	MSL1	Q68DK7	614 aa		12.87	□□□□□ -0.35
NARF-222	ENST00000583908	MIS18A	Q9NYP9	233 aa		12.87	□□□□□ -0.35
NARF-222	ENST00000583908	HOXB7	P09629	217 aa		12.86	□□□□□ -0.35
NARF-222	ENST00000583908	ZNF652	Q9Y2D9	606 aa		12.86	□□□□□ -0.35
NARF-222	ENST00000583908	C4A	P0C0L4	1744 aa		12.85	□□□□□ -0.35
NARF-222	ENST00000583908	CHL1	O00533	1208 aa		12.85	□□□□□ -0.35
NARF-222	ENST00000583908	GIGYF1	O75420	1035 aa	Predicted RBP	12.85	□□□□□ -0.35
NARF-222	ENST00000583908	KLHL34	Q8N239	644 aa		12.85	□□□□□ -0.35
NARF-222	ENST00000583908	NARF	Q9UHQ1	456 aa		12.85	□□□□□ -0.35
NARF-222	ENST00000583908	PARP3	Q9Y6F1	533 aa		12.85	□□□□□ -0.35
NARF-222	ENST00000583908	IL16	Q14005	1332 aa		12.85	□□□□□ -0.35
NARF-222	ENST00000583908	COL24A1	Q17RW2	1714 aa		12.85	□□□□□ -0.35
NARF-222	ENST00000583908	MYH14	Q7Z406	1995 aa	Known RBP	12.84	□□□□□ -0.35
NARF-222	ENST00000583908	GYS1	P13807	737 aa		12.84	□□□□□ -0.35
NARF-222	ENST00000583908	EIF5	P55010	431 aa	Known RBP	12.84	□□□□□ -0.35
NARF-222	ENST00000583908	AMIGO3	Q86WK7	504 aa		12.84	□□□□□ -0.35
NARF-222	ENST00000583908	SGIP1	Q9BQI5	828 aa		12.84	□□□□□ -0.35
NARF-222	ENST00000583908	SRCAP	Q6ZRS2	3230 aa		12.84	□□□□□ -0.35
NARF-222	ENST00000583908	RGL2	O15211	777 aa		12.83	□□□□□ -0.36
NARF-222	ENST00000583908	A1BG	P04217	495 aa		12.83	□□□□□ -0.36
NARF-222	ENST00000583908	MMP10	P09238	476 aa		12.83	□□□□□ -0.36
NARF-222	ENST00000583908	USPL1	Q5W0Q7	1092 aa		12.83	□□□□□ -0.36
NARF-222	ENST00000583908	KIF6	Q6ZMV9	814 aa		12.83	□□□□□ -0.36
NARF-222	ENST00000583908	DZIP3	Q86Y13	1208 aa	Known RBP	12.83	□□□□□ -0.36
NARF-222	ENST00000583908	WWC1	Q8IX03	1113 aa		12.83	□□□□□ -0.36
NARF-222	ENST00000583908	USP16	Q9Y5T5	823 aa		12.83	□□□□□ -0.36
NARF-222	ENST00000583908	WDR63	Q8IWG1	891 aa		12.82	□□□□□ -0.36
NARF-222	ENST00000583908	SCN7A	Q01118	1682 aa		12.82	□□□□□ -0.36
NARF-222	ENST00000583908	NPHP1	O15259	732 aa		12.81	□□□□□ -0.36
NARF-222	ENST00000583908	EIF2S2	P20042	333 aa	Known RBP	12.81	□□□□□ -0.36
NARF-222	ENST00000583908	HDGFL1	Q5TGJ6	251 aa		12.81	□□□□□ -0.36
NARF-222	ENST00000583908	SMIM5	Q71RC9	77 aa		12.81	□□□□□ -0.36
NARF-222	ENST00000583908	FHDC1	Q9C0D6	1143 aa	Predicted RBP	12.81	□□□□□ -0.36
NARF-222	ENST00000583908	MYH16	Q9H6N6	1097 aa		12.81	□□□□□ -0.36
NARF-222	ENST00000583908	MBIP	Q9NS73	344 aa		12.81	□□□□□ -0.36
NARF-222	ENST00000583908	SRP68	Q9UHB9	627 aa	Known RBP	12.81	□□□□□ -0.36
NARF-222	ENST00000583908	CD2AP	Q9Y5K6	639 aa		12.81	□□□□□ -0.36
NARF-222	ENST00000583908	PRAMEF22	A3QJZ6	481 aa		12.8	□□□□□ -0.36
NARF-222	ENST00000583908	ZNF853	P0CG23	659 aa		12.8	□□□□□ -0.36
NARF-222	ENST00000583908	CLEC4G	Q6UXB4	293 aa		12.8	□□□□□ -0.36
NARF-222	ENST00000583908	CARMIL3	Q8ND23	1372 aa		12.8	□□□□□ -0.36
NARF-222	ENST00000583908	MYL6B	P14649	208 aa		12.79	□□□□□ -0.36
NARF-222	ENST00000583908	FKBP8	Q14318	412 aa		12.79	□□□□□ -0.36
NARF-222	ENST00000583908	SYT17	Q9BSW7	474 aa		12.79	□□□□□ -0.36
NARF-222	ENST00000583908	TBC1D2B	Q9UPU7	963 aa		12.79	□□□□□ -0.36
NARF-222	ENST00000583908	SALL2	Q9Y467	1007 aa	Predicted RBP	12.79	□□□□□ -0.36
NARF-222	ENST00000583908	GOLGA2	Q08379	1002 aa		12.78	□□□□□ -0.36
NARF-222	ENST00000583908	DUSP27	Q5VZP5	1158 aa		12.78	□□□□□ -0.36
NARF-222	ENST00000583908	SETDB2	Q96T68	719 aa		12.78	□□□□□ -0.36
NARF-222	ENST00000583908	DBF4	Q9UBU7	674 aa	Predicted RBP	12.78	□□□□□ -0.36
NARF-222	ENST00000583908	BCOR	Q6W2J9	1755 aa		12.77	□□□□□ -0.36
NARF-222	ENST00000583908	ERVV-1	B6SEH8	477 aa		12.77	□□□□□ -0.37
NARF-222	ENST00000583908	PIP4K2A	P48426	406 aa	Predicted RBP	12.77	□□□□□ -0.37
NARF-222	ENST00000583908	CCDC30	Q5VVM6	783 aa		12.77	□□□□□ -0.37
NARF-222	ENST00000583908	STK31	Q9BXU1	1019 aa		12.77	□□□□□ -0.37
NARF-222	ENST00000583908	DDX21	Q9NR30	783 aa	Known RBP eCLIP	12.77	□□□□□ -0.37
NARF-222	ENST00000583908	HYPK	Q9NX55	129 aa		12.77	□□□□□ -0.37
NARF-222	ENST00000583908	C10orf71	Q711Q0	1435 aa		12.77	□□□□□ -0.37
NARF-222	ENST00000583908	NBPF26	B4DH59	902 aa		12.76	□□□□□ -0.37
NARF-222	ENST00000583908	CAMTA2	O94983	1202 aa		12.76	□□□□□ -0.37
NARF-222	ENST00000583908	TGFB2	P61812	414 aa		12.76	□□□□□ -0.37
NARF-222	ENST00000583908	ST5	P78524	1137 aa		12.76	□□□□□ -0.37
NARF-222	ENST00000583908	HSP90AB3P	Q58FF7	597 aa		12.76	□□□□□ -0.37
NARF-222	ENST00000583908	NBPF10	Q6P3W6	841 aa	Known RBP	12.76	□□□□□ -0.37
NARF-222	ENST00000583908	NBPF15	Q8N660	670 aa		12.76	□□□□□ -0.37
NARF-222	ENST00000583908	MAP3K15	Q6ZN16	1313 aa		12.76	□□□□□ -0.37
NARF-222	ENST00000583908	POLRMT	O00411	1230 aa	Known RBP	12.75	□□□□□ -0.37
NARF-222	ENST00000583908	NFIX	Q14938	502 aa		12.75	□□□□□ -0.37
NARF-222	ENST00000583908	BICDL1	Q6ZP65	573 aa		12.75	□□□□□ -0.37
NARF-222	ENST00000583908	MIER1	Q8N108	512 aa		12.75	□□□□□ -0.37
NARF-222	ENST00000583908	NECTIN2	Q92692	538 aa		12.75	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms