RNA–Protein interactions for RNA: ENST00000583380.5

SKA2-207, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 5 BASIC

Gene SKA2, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-207ENST00000583380 ANKRD18BA2A2Z9 1011 aa11.04□□□□□ -0.64
SKA2-207ENST00000583380 ERLIN1O75477 346 aa11.04□□□□□ -0.64
SKA2-207ENST00000583380 HCLS1P14317 486 aaPredicted RBP11.04□□□□□ -0.64
SKA2-207ENST00000583380 PLA2G4AP47712 749 aa11.04□□□□□ -0.64
SKA2-207ENST00000583380 DDR1Q08345 913 aa11.04□□□□□ -0.64
SKA2-207ENST00000583380 TDRD7Q8NHU6 1098 aaKnown RBP11.04□□□□□ -0.64
SKA2-207ENST00000583380 HNRNPLLQ8WVV9 542 aaKnown RBP11.04□□□□□ -0.64
SKA2-207ENST00000583380 CFAP53Q96M91 514 aa11.04□□□□□ -0.64
SKA2-207ENST00000583380 NUCKS1Q9H1E3 243 aaKnown RBP11.04□□□□□ -0.64
SKA2-207ENST00000583380 TRAK1Q9UPV9 953 aa11.04□□□□□ -0.64
SKA2-207ENST00000583380 ZDHHC9Q9Y397 364 aa11.04□□□□□ -0.64
SKA2-207ENST00000583380 NESP48681 1621 aa11.04□□□□□ -0.64
SKA2-207ENST00000583380 WDR7Q9Y4E6 1490 aa11.04□□□□□ -0.64
SKA2-207ENST00000583380 A0A1B0GUA9 196 aa11.03□□□□□ -0.64
SKA2-207ENST00000583380 ANKRD33BA6NCL7 494 aa11.03□□□□□ -0.64
SKA2-207ENST00000583380 PPFIA4O75335 1185 aa11.03□□□□□ -0.64
SKA2-207ENST00000583380 CLCN6P51797 869 aa11.03□□□□□ -0.64
SKA2-207ENST00000583380 ELF2Q15723 593 aa11.03□□□□□ -0.64
SKA2-207ENST00000583380 MAP3K11Q16584 847 aa11.03□□□□□ -0.64
SKA2-207ENST00000583380 CCDC186Q7Z3E2 898 aa11.03□□□□□ -0.64
SKA2-207ENST00000583380 KIAA1328Q86T90 577 aa11.03□□□□□ -0.64
SKA2-207ENST00000583380 PLA2G4DQ86XP0 818 aa11.03□□□□□ -0.64
SKA2-207ENST00000583380 CCDC150Q8NCX0 1101 aa11.03□□□□□ -0.64
SKA2-207ENST00000583380 SH3GL3Q99963 347 aa11.03□□□□□ -0.64
SKA2-207ENST00000583380 ZSCAN16Q9H4T2 348 aaPredicted RBP11.03□□□□□ -0.64
SKA2-207ENST00000583380 DDX19AQ9NUU7 478 aaKnown RBP11.03□□□□□ -0.64
SKA2-207ENST00000583380 UNC13AQ9UPW8 1703 aa11.03□□□□□ -0.64
SKA2-207ENST00000583380 TTC41PQ6P2S7 1318 aa11.03□□□□□ -0.64
SKA2-207ENST00000583380 C9orf84Q5VXU9 1444 aa11.02□□□□□ -0.64
SKA2-207ENST00000583380 CCDC151A5D8V7 595 aa11.02□□□□□ -0.65
SKA2-207ENST00000583380 ERC2O15083 957 aa11.02□□□□□ -0.65
SKA2-207ENST00000583380 CASTP20810 708 aaKnown RBP11.02□□□□□ -0.65
SKA2-207ENST00000583380 ZNF75DP51815 510 aa11.02□□□□□ -0.65
SKA2-207ENST00000583380 TRAF1Q13077 416 aa11.02□□□□□ -0.65
SKA2-207ENST00000583380 PDCD2Q16342 344 aaPredicted RBP11.02□□□□□ -0.65
SKA2-207ENST00000583380 LRRFIP1Q32MZ4 808 aaKnown RBP11.02□□□□□ -0.65
SKA2-207ENST00000583380 HSP90B2PQ58FF3 399 aa11.02□□□□□ -0.65
SKA2-207ENST00000583380 GBP6Q6ZN66 633 aa11.02□□□□□ -0.65
SKA2-207ENST00000583380 USP48Q86UV5 1035 aa11.02□□□□□ -0.65
SKA2-207ENST00000583380 P3H3Q8IVL6 736 aa11.02□□□□□ -0.65
SKA2-207ENST00000583380 VEZTQ9HBM0 779 aa11.02□□□□□ -0.65
SKA2-207ENST00000583380 DNAI1Q9UI46 699 aa11.02□□□□□ -0.65
SKA2-207ENST00000583380 ADAM21Q9UKJ8 722 aa11.02□□□□□ -0.65
SKA2-207ENST00000583380 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.02□□□□□ -0.65
SKA2-207ENST00000583380 FAM177BA6PVY3 158 aa11.01□□□□□ -0.65
SKA2-207ENST00000583380 U2SURPO15042 1029 aaKnown RBP11.01□□□□□ -0.65
SKA2-207ENST00000583380 CD2BP2O95400 341 aaKnown RBP11.01□□□□□ -0.65
SKA2-207ENST00000583380 RLBP1P12271 317 aa11.01□□□□□ -0.65
SKA2-207ENST00000583380 PTGS1P23219 599 aa11.01□□□□□ -0.65
SKA2-207ENST00000583380 MCM3P25205 808 aa11.01□□□□□ -0.65
SKA2-207ENST00000583380 MNAT1P51948 309 aa11.01□□□□□ -0.65
SKA2-207ENST00000583380 CCDC93Q567U6 631 aa11.01□□□□□ -0.65
SKA2-207ENST00000583380 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.01□□□□□ -0.65
SKA2-207ENST00000583380 FCHSD1Q86WN1 690 aa11.01□□□□□ -0.65
SKA2-207ENST00000583380 ITPRIPQ8IWB1 547 aa11.01□□□□□ -0.65
SKA2-207ENST00000583380 MICALL1Q8N3F8 863 aa11.01□□□□□ -0.65
SKA2-207ENST00000583380 RNF217Q8TC41 542 aa11.01□□□□□ -0.65
SKA2-207ENST00000583380 BICD2Q8TD16 824 aa11.01□□□□□ -0.65
SKA2-207ENST00000583380 RABGGTAQ92696 567 aa11.01□□□□□ -0.65
SKA2-207ENST00000583380 TRIM5Q9C035 493 aa11.01□□□□□ -0.65
SKA2-207ENST00000583380 FOXD4L1Q9NU39 408 aa11.01□□□□□ -0.65
SKA2-207ENST00000583380 GNL3LQ9NVN8 582 aaKnown RBP11.01□□□□□ -0.65
SKA2-207ENST00000583380 RTL1A6NKG5 1358 aa11.01□□□□□ -0.65
SKA2-207ENST00000583380 SENP3-EIF4A1A0A087X0R7 540 aa11□□□□□ -0.65
SKA2-207ENST00000583380 GOLGA6L19H0YKK7 550 aa11□□□□□ -0.65
SKA2-207ENST00000583380 MPHOSPH10O00566 681 aaKnown RBP11□□□□□ -0.65
SKA2-207ENST00000583380 SRGAP3O43295 1099 aa11□□□□□ -0.65
SKA2-207ENST00000583380 OAS2P29728 719 aaKnown RBP11□□□□□ -0.65
SKA2-207ENST00000583380 RWDD2BP57060 319 aa11□□□□□ -0.65
SKA2-207ENST00000583380 C1QBPQ07021 282 aaKnown RBP11□□□□□ -0.65
SKA2-207ENST00000583380 SNW1Q13573 536 aaKnown RBP11□□□□□ -0.65
SKA2-207ENST00000583380 SLMAPQ14BN4 828 aa11□□□□□ -0.65
SKA2-207ENST00000583380 RBBP5Q15291 538 aaKnown RBP11□□□□□ -0.65
SKA2-207ENST00000583380 ARHGAP29Q52LW3 1261 aa11□□□□□ -0.65
SKA2-207ENST00000583380 AP1ARQ63HQ0 302 aa11□□□□□ -0.65
SKA2-207ENST00000583380 HDXQ7Z353 690 aa11□□□□□ -0.65
SKA2-207ENST00000583380 PACS2Q86VP3 889 aa11□□□□□ -0.65
SKA2-207ENST00000583380 LRRC8AQ8IWT6 810 aa11□□□□□ -0.65
SKA2-207ENST00000583380 TEX11Q8IYF3 940 aa11□□□□□ -0.65
SKA2-207ENST00000583380 CCAR2Q8N163 923 aaKnown RBP11□□□□□ -0.65
SKA2-207ENST00000583380 NEK11Q8NG66 645 aa11□□□□□ -0.65
SKA2-207ENST00000583380 CTCFLQ8NI51 663 aaPredicted RBP11□□□□□ -0.65
SKA2-207ENST00000583380 JARID2Q92833 1246 aaPredicted RBP11□□□□□ -0.65
SKA2-207ENST00000583380 BATF3Q9NR55 127 aa11□□□□□ -0.65
SKA2-207ENST00000583380 ORC3Q9UBD5 711 aaPredicted RBP11□□□□□ -0.65
SKA2-207ENST00000583380 SH3BP1Q9Y3L3 701 aa11□□□□□ -0.65
SKA2-207ENST00000583380 MED14O60244 1454 aa11□□□□□ -0.65
SKA2-207ENST00000583380 LRRIQ1Q96JM4 1722 aa10.99□□□□□ -0.65
SKA2-207ENST00000583380 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.99□□□□□ -0.65
SKA2-207ENST00000583380 TRIM66O15016 1216 aa10.99□□□□□ -0.65
SKA2-207ENST00000583380 CHUKO15111 745 aa10.99□□□□□ -0.65
SKA2-207ENST00000583380 MAFGO15525 162 aa10.99□□□□□ -0.65
SKA2-207ENST00000583380 ERLIN2O94905 339 aa10.99□□□□□ -0.65
SKA2-207ENST00000583380 NBPF7P0C2Y1 421 aaPredicted RBP10.99□□□□□ -0.65
SKA2-207ENST00000583380 GCFC2P16383 781 aaKnown RBP10.99□□□□□ -0.65
SKA2-207ENST00000583380 NF2P35240 595 aa10.99□□□□□ -0.65
SKA2-207ENST00000583380 LMAN1P49257 510 aa10.99□□□□□ -0.65
SKA2-207ENST00000583380 FAM71BQ8TC56 605 aa10.99□□□□□ -0.65
SKA2-207ENST00000583380 RTF1Q92541 710 aaKnown RBP10.99□□□□□ -0.65
SKA2-207ENST00000583380 SMARCE1Q969G3 411 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 269 ms