RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-223ENST00000582114 TM4SF1P30408 202 aa15.65■□□□□ 0.1
CDK5RAP3-223ENST00000582114 IL17REQ8NFR9 667 aa15.65■□□□□ 0.1
CDK5RAP3-223ENST00000582114 PIM2Q9P1W9 311 aa15.65■□□□□ 0.1
CDK5RAP3-223ENST00000582114 GNAT3A8MTJ3 354 aa15.64■□□□□ 0.09
CDK5RAP3-223ENST00000582114 KIF3CO14782 793 aa15.64■□□□□ 0.09
CDK5RAP3-223ENST00000582114 TEFQ10587 303 aa15.64■□□□□ 0.09
CDK5RAP3-223ENST00000582114 NFIXQ14938 502 aa15.64■□□□□ 0.09
CDK5RAP3-223ENST00000582114 GAS2L2Q8NHY3 880 aa15.64■□□□□ 0.09
CDK5RAP3-223ENST00000582114 NARFQ9UHQ1 456 aa15.64■□□□□ 0.09
CDK5RAP3-223ENST00000582114 ZNF330Q9Y3S2 320 aaPredicted RBP15.64■□□□□ 0.09
CDK5RAP3-223ENST00000582114 UBR2Q8IWV8 1755 aa15.64■□□□□ 0.09
CDK5RAP3-223ENST00000582114 DALRD3Q5D0E6 543 aaKnown RBP15.63■□□□□ 0.09
CDK5RAP3-223ENST00000582114 C9orf131Q5VYM1 1079 aa15.63■□□□□ 0.09
CDK5RAP3-223ENST00000582114 BICDL1Q6ZP65 573 aa15.63■□□□□ 0.09
CDK5RAP3-223ENST00000582114 VSIG10Q8N0Z9 540 aa15.63■□□□□ 0.09
CDK5RAP3-223ENST00000582114 ZNF496Q96IT1 587 aaPredicted RBP15.63■□□□□ 0.09
CDK5RAP3-223ENST00000582114 BCL2L12Q9HB09 334 aa15.63■□□□□ 0.09
CDK5RAP3-223ENST00000582114 AFDNP55196 1824 aaKnown RBP15.62■□□□□ 0.09
CDK5RAP3-223ENST00000582114 ARFGEF1Q9Y6D6 1849 aa15.62■□□□□ 0.09
CDK5RAP3-223ENST00000582114 PRKAR2BP31323 418 aa15.62■□□□□ 0.09
CDK5RAP3-223ENST00000582114 PHACTR3Q96KR7 559 aa15.62■□□□□ 0.09
CDK5RAP3-223ENST00000582114 STARD3NLO95772 234 aa15.61■□□□□ 0.09
CDK5RAP3-223ENST00000582114 HSPA6P17066 643 aa15.61■□□□□ 0.09
CDK5RAP3-223ENST00000582114 ZNF790Q6PG37 636 aa15.61■□□□□ 0.09
CDK5RAP3-223ENST00000582114 CFAP53Q96M91 514 aa15.61■□□□□ 0.09
CDK5RAP3-223ENST00000582114 NMRK2Q9NPI5 230 aa15.61■□□□□ 0.09
CDK5RAP3-223ENST00000582114 KCNQ3O43525 872 aa15.6■□□□□ 0.09
CDK5RAP3-223ENST00000582114 SERPINB2P05120 415 aa15.6■□□□□ 0.09
CDK5RAP3-223ENST00000582114 RSPH6AQ9H0K4 717 aa15.6■□□□□ 0.09
CDK5RAP3-223ENST00000582114 HEG1Q9ULI3 1381 aa15.6■□□□□ 0.09
CDK5RAP3-223ENST00000582114 SIPA1L3O60292 1781 aaPredicted RBP15.59■□□□□ 0.09
CDK5RAP3-223ENST00000582114 RNF181Q9P0P0 153 aa15.59■□□□□ 0.09
CDK5RAP3-223ENST00000582114 TBC1D2BQ9UPU7 963 aa15.59■□□□□ 0.09
CDK5RAP3-223ENST00000582114 CARMIL3Q8ND23 1372 aa15.59■□□□□ 0.09
CDK5RAP3-223ENST00000582114 A1BGP04217 495 aa15.58■□□□□ 0.08
CDK5RAP3-223ENST00000582114 U2AF1L5P0DN76 240 aaPredicted RBP15.58■□□□□ 0.08
CDK5RAP3-223ENST00000582114 PPP2R1AP30153 589 aa15.58■□□□□ 0.08
CDK5RAP3-223ENST00000582114 EIF5P55010 431 aaKnown RBP15.58■□□□□ 0.08
CDK5RAP3-223ENST00000582114 U2AF1Q01081 240 aaKnown RBP eCLIP15.58■□□□□ 0.08
CDK5RAP3-223ENST00000582114 RASSF7Q02833 373 aa15.58■□□□□ 0.08
CDK5RAP3-223ENST00000582114 CCDC24Q8N4L8 307 aa15.58■□□□□ 0.08
CDK5RAP3-223ENST00000582114 NRXN2Q9P2S2 1712 aa15.57■□□□□ 0.08
CDK5RAP3-223ENST00000582114 BTBD11A6QL63 1104 aa15.57■□□□□ 0.08
CDK5RAP3-223ENST00000582114 PIP4K2AP48426 406 aaPredicted RBP15.57■□□□□ 0.08
CDK5RAP3-223ENST00000582114 TBC1D9BQ66K14 1250 aa15.57■□□□□ 0.08
CDK5RAP3-223ENST00000582114 MCM10Q7L590 875 aa15.57■□□□□ 0.08
CDK5RAP3-223ENST00000582114 C2CD5Q86YS7 1000 aa15.57■□□□□ 0.08
CDK5RAP3-223ENST00000582114 FMNL2Q96PY5 1086 aa15.57■□□□□ 0.08
CDK5RAP3-223ENST00000582114 NUDCQ9Y266 331 aa15.57■□□□□ 0.08
CDK5RAP3-223ENST00000582114 A0A087WZG4 1122 aa15.56■□□□□ 0.08
CDK5RAP3-223ENST00000582114 CEMIPQ8WUJ3 1361 aa15.56■□□□□ 0.08
CDK5RAP3-223ENST00000582114 SCN7AQ01118 1682 aa15.55■□□□□ 0.08
CDK5RAP3-223ENST00000582114 PRAMEF22A3QJZ6 481 aa15.55■□□□□ 0.08
CDK5RAP3-223ENST00000582114 DCTN1Q14203 1278 aa15.55■□□□□ 0.08
CDK5RAP3-223ENST00000582114 TEX13AQ9BXU3 409 aaPredicted RBP15.55■□□□□ 0.08
CDK5RAP3-223ENST00000582114 TOMM70O94826 608 aa15.54■□□□□ 0.08
CDK5RAP3-223ENST00000582114 NPM2Q86SE8 214 aaKnown RBP15.54■□□□□ 0.08
CDK5RAP3-223ENST00000582114 RTF1Q92541 710 aaKnown RBP15.54■□□□□ 0.08
CDK5RAP3-223ENST00000582114 SBF1O95248 1867 aa15.54■□□□□ 0.08
CDK5RAP3-223ENST00000582114 H0YIN7 160 aa15.53■□□□□ 0.08
CDK5RAP3-223ENST00000582114 IL6STP40189 918 aaPredicted RBP15.53■□□□□ 0.08
CDK5RAP3-223ENST00000582114 C16orf71Q8IYS4 520 aaPredicted RBP15.53■□□□□ 0.08
CDK5RAP3-223ENST00000582114 TTLL6Q8N841 843 aa15.53■□□□□ 0.08
CDK5RAP3-223ENST00000582114 ZNF622Q969S3 477 aaKnown RBP eCLIP15.53■□□□□ 0.08
CDK5RAP3-223ENST00000582114 ZNF219Q9P2Y4 722 aaPredicted RBP15.53■□□□□ 0.08
CDK5RAP3-223ENST00000582114 USP16Q9Y5T5 823 aa15.53■□□□□ 0.08
CDK5RAP3-223ENST00000582114 DLEC1Q9Y238 1755 aa15.53■□□□□ 0.08
CDK5RAP3-223ENST00000582114 PRELPP51888 382 aa15.52■□□□□ 0.08
CDK5RAP3-223ENST00000582114 RRAGCQ9HB90 399 aa15.52■□□□□ 0.08
CDK5RAP3-223ENST00000582114 ANKRD31Q8N7Z5 1873 aa15.52■□□□□ 0.07
CDK5RAP3-223ENST00000582114 KDM2BQ8NHM5 1336 aa15.51■□□□□ 0.07
CDK5RAP3-223ENST00000582114 NPHP1O15259 732 aa15.51■□□□□ 0.07
CDK5RAP3-223ENST00000582114 CAMTA2O94983 1202 aa15.51■□□□□ 0.07
CDK5RAP3-223ENST00000582114 PRR5LQ6MZQ0 368 aa15.51■□□□□ 0.07
CDK5RAP3-223ENST00000582114 DZIP3Q86Y13 1208 aaKnown RBP15.51■□□□□ 0.07
CDK5RAP3-223ENST00000582114 SETDB2Q96T68 719 aa15.5■□□□□ 0.07
CDK5RAP3-223ENST00000582114 COL11A2P13942 1736 aaPredicted RBP15.5■□□□□ 0.07
CDK5RAP3-223ENST00000582114 APLP1P51693 650 aa15.49■□□□□ 0.07
CDK5RAP3-223ENST00000582114 CNBD1Q8NA66 436 aa15.49■□□□□ 0.07
CDK5RAP3-223ENST00000582114 BRIP1Q9BX63 1249 aa15.49■□□□□ 0.07
CDK5RAP3-223ENST00000582114 MIS18AQ9NYP9 233 aa15.49■□□□□ 0.07
CDK5RAP3-223ENST00000582114 BCORQ6W2J9 1755 aa15.49■□□□□ 0.07
CDK5RAP3-223ENST00000582114 NFKBIEO00221 500 aa15.48■□□□□ 0.07
CDK5RAP3-223ENST00000582114 C21orf2O43822 256 aa15.48■□□□□ 0.07
CDK5RAP3-223ENST00000582114 SNRPA1P09661 255 aaKnown RBP15.48■□□□□ 0.07
CDK5RAP3-223ENST00000582114 LMNB1P20700 586 aa15.48■□□□□ 0.07
CDK5RAP3-223ENST00000582114 PDE6BP35913 854 aa15.48■□□□□ 0.07
CDK5RAP3-223ENST00000582114 HTRA3P83110 453 aa15.48■□□□□ 0.07
CDK5RAP3-223ENST00000582114 RBM46Q8TBY0 533 aaKnown RBP15.48■□□□□ 0.07
CDK5RAP3-223ENST00000582114 CCDC88AQ3V6T2 1871 aa15.48■□□□□ 0.07
CDK5RAP3-223ENST00000582114 TNRC6CQ9HCJ0 1690 aaKnown RBP15.47■□□□□ 0.07
CDK5RAP3-223ENST00000582114 CACNA1SQ13698 1873 aa15.46■□□□□ 0.07
CDK5RAP3-223ENST00000582114 TIAM2Q8IVF5 1701 aa15.46■□□□□ 0.07
CDK5RAP3-223ENST00000582114 ST5P78524 1137 aa15.46■□□□□ 0.07
CDK5RAP3-223ENST00000582114 FAM177BA6PVY3 158 aa15.45■□□□□ 0.06
CDK5RAP3-223ENST00000582114 NBPF26B4DH59 902 aa15.45■□□□□ 0.06
CDK5RAP3-223ENST00000582114 TAF7Q15545 349 aaPredicted RBP15.45■□□□□ 0.06
CDK5RAP3-223ENST00000582114 NBPF10Q6P3W6 841 aaKnown RBP15.45■□□□□ 0.06
CDK5RAP3-223ENST00000582114 NBPF5PQ86XG9 351 aaPredicted RBP15.45■□□□□ 0.06
CDK5RAP3-223ENST00000582114 NBPF15Q8N660 670 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms