RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 RTF1Q92541 710 aaKnown RBP16.23■□□□□ 0.19
SRSF1-204ENST00000581979 GNAI1P63096 354 aa16.22■□□□□ 0.19
SRSF1-204ENST00000581979 ERICH6BQ5W0A0 696 aa16.22■□□□□ 0.19
SRSF1-204ENST00000581979 NLGN2Q8NFZ4 835 aa16.22■□□□□ 0.19
SRSF1-204ENST00000581979 IFT57Q9NWB7 429 aa16.22■□□□□ 0.19
SRSF1-204ENST00000581979 COL5A3P25940 1745 aaPredicted RBP16.22■□□□□ 0.19
SRSF1-204ENST00000581979 RC3H1Q5TC82 1133 aaKnown RBP16.22■□□□□ 0.19
SRSF1-204ENST00000581979 RBM42Q9BTD8 480 aaKnown RBP16.22■□□□□ 0.19
SRSF1-204ENST00000581979 GOLGB1Q14789 3259 aaKnown RBP16.21■□□□□ 0.19
SRSF1-204ENST00000581979 MCM10Q7L590 875 aa16.21■□□□□ 0.19
SRSF1-204ENST00000581979 CD2APQ9Y5K6 639 aa16.21■□□□□ 0.19
SRSF1-204ENST00000581979 CHD4Q14839 1912 aa16.2■□□□□ 0.18
SRSF1-204ENST00000581979 CNTNAP4Q9C0A0 1308 aa16.2■□□□□ 0.18
SRSF1-204ENST00000581979 EXOSC9Q06265 439 aaKnown RBP16.2■□□□□ 0.18
SRSF1-204ENST00000581979 GPR162Q16538 588 aa16.2■□□□□ 0.18
SRSF1-204ENST00000581979 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.2■□□□□ 0.18
SRSF1-204ENST00000581979 MRC1P22897 1456 aa16.2■□□□□ 0.18
SRSF1-204ENST00000581979 GNAT3A8MTJ3 354 aa16.19■□□□□ 0.18
SRSF1-204ENST00000581979 HTATSF1O43719 755 aaKnown RBP16.19■□□□□ 0.18
SRSF1-204ENST00000581979 CFAP44Q96MT7 982 aa16.19■□□□□ 0.18
SRSF1-204ENST00000581979 SLC52A2Q9HAB3 445 aa16.19■□□□□ 0.18
SRSF1-204ENST00000581979 RTCBQ9Y3I0 505 aaKnown RBP16.19■□□□□ 0.18
SRSF1-204ENST00000581979 ADAMTS7Q9UKP4 1686 aa16.19■□□□□ 0.18
SRSF1-204ENST00000581979 CICQ96RK0 1608 aaPredicted RBP16.19■□□□□ 0.18
SRSF1-204ENST00000581979 PLIN1O60240 522 aa16.19■□□□□ 0.18
SRSF1-204ENST00000581979 CT47B1P0C2W7 299 aaPredicted RBP16.19■□□□□ 0.18
SRSF1-204ENST00000581979 ZNF853P0CG23 659 aa16.19■□□□□ 0.18
SRSF1-204ENST00000581979 ADRA2BP18089 450 aa16.19■□□□□ 0.18
SRSF1-204ENST00000581979 LGR6Q9HBX8 967 aa16.19■□□□□ 0.18
SRSF1-204ENST00000581979 RNMTO43148 476 aaKnown RBP16.18■□□□□ 0.18
SRSF1-204ENST00000581979 PTCD1O75127 700 aaKnown RBP16.18■□□□□ 0.18
SRSF1-204ENST00000581979 TRAPPC3LQ5T215 181 aa16.18■□□□□ 0.18
SRSF1-204ENST00000581979 MYH14Q7Z406 1995 aaKnown RBP16.18■□□□□ 0.18
SRSF1-204ENST00000581979 RPS6KA4O75676 772 aa16.17■□□□□ 0.18
SRSF1-204ENST00000581979 BCAR3O75815 825 aa16.17■□□□□ 0.18
SRSF1-204ENST00000581979 MBIPQ9NS73 344 aa16.17■□□□□ 0.18
SRSF1-204ENST00000581979 VIRMAQ69YN4 1812 aaKnown RBP16.17■□□□□ 0.18
SRSF1-204ENST00000581979 RARSP54136 660 aaKnown RBP16.16■□□□□ 0.18
SRSF1-204ENST00000581979 ARHGEF1Q92888 912 aaKnown RBP16.16■□□□□ 0.18
SRSF1-204ENST00000581979 TJP1Q07157 1748 aa16.15■□□□□ 0.18
SRSF1-204ENST00000581979 YBX3P16989 372 aaKnown RBP eCLIP16.14■□□□□ 0.17
SRSF1-204ENST00000581979 CANXP27824 592 aaKnown RBP16.14■□□□□ 0.17
SRSF1-204ENST00000581979 CRKLP46109 303 aaKnown RBP16.14■□□□□ 0.17
SRSF1-204ENST00000581979 PELP1Q8IZL8 1130 aaKnown RBP16.14■□□□□ 0.17
SRSF1-204ENST00000581979 NLGN1Q8N2Q7 840 aa16.14■□□□□ 0.17
SRSF1-204ENST00000581979 PPP4R2Q9NY27 417 aa16.14■□□□□ 0.17
SRSF1-204ENST00000581979 GRIN3BO60391 1043 aa16.14■□□□□ 0.17
SRSF1-204ENST00000581979 CHL1O00533 1208 aa16.13■□□□□ 0.17
SRSF1-204ENST00000581979 MMP10P09238 476 aa16.13■□□□□ 0.17
SRSF1-204ENST00000581979 ZNF784Q8NCA9 323 aaPredicted RBP16.13■□□□□ 0.17
SRSF1-204ENST00000581979 BCL2L13Q9BXK5 485 aa16.13■□□□□ 0.17
SRSF1-204ENST00000581979 KCPQ6ZWJ8 1503 aa16.12■□□□□ 0.17
SRSF1-204ENST00000581979 C4AP0C0L4 1744 aa16.12■□□□□ 0.17
SRSF1-204ENST00000581979 GYS1P13807 737 aa16.12■□□□□ 0.17
SRSF1-204ENST00000581979 RFC4P35249 363 aa16.12■□□□□ 0.17
SRSF1-204ENST00000581979 IL17REQ8NFR9 667 aa16.12■□□□□ 0.17
SRSF1-204ENST00000581979 SLC39A6Q13433 755 aa16.11■□□□□ 0.17
SRSF1-204ENST00000581979 INTS5Q6P9B9 1019 aaKnown RBP16.11■□□□□ 0.17
SRSF1-204ENST00000581979 FRAT1Q92837 279 aaPredicted RBP16.11■□□□□ 0.17
SRSF1-204ENST00000581979 TSPYL4Q9UJ04 414 aa16.11■□□□□ 0.17
SRSF1-204ENST00000581979 DNAJC10Q8IXB1 793 aa16.11■□□□□ 0.17
SRSF1-204ENST00000581979 VSIG10Q8N0Z9 540 aa16.11■□□□□ 0.17
SRSF1-204ENST00000581979 EXOC6Q8TAG9 804 aa16.11■□□□□ 0.17
SRSF1-204ENST00000581979 SMC4Q9NTJ3 1288 aa16.11■□□□□ 0.17
SRSF1-204ENST00000581979 TWISTNBQ3B726 338 aaPredicted RBP16.1■□□□□ 0.17
SRSF1-204ENST00000581979 C20orf194Q5TEA3 1177 aa16.1■□□□□ 0.17
SRSF1-204ENST00000581979 ZNF428Q96B54 188 aa16.1■□□□□ 0.17
SRSF1-204ENST00000581979 CRBNQ96SW2 442 aa16.1■□□□□ 0.17
SRSF1-204ENST00000581979 UBR2Q8IWV8 1755 aa16.1■□□□□ 0.17
SRSF1-204ENST00000581979 KIF13BQ9NQT8 1826 aa16.1■□□□□ 0.17
SRSF1-204ENST00000581979 ELL2O00472 640 aaPredicted RBP16.09■□□□□ 0.17
SRSF1-204ENST00000581979 VAMP4O75379 141 aa16.09■□□□□ 0.17
SRSF1-204ENST00000581979 CYP19A1P11511 503 aaPredicted RBP16.09■□□□□ 0.17
SRSF1-204ENST00000581979 TSPYL6Q8N831 410 aa16.09■□□□□ 0.17
SRSF1-204ENST00000581979 CCDC87Q9NVE4 849 aa16.09■□□□□ 0.17
SRSF1-204ENST00000581979 MIS18AQ9NYP9 233 aa16.09■□□□□ 0.17
SRSF1-204ENST00000581979 CEMIPQ8WUJ3 1361 aa16.09■□□□□ 0.17
SRSF1-204ENST00000581979 TAF7Q15545 349 aaPredicted RBP16.08■□□□□ 0.17
SRSF1-204ENST00000581979 ALDH1L2Q3SY69 923 aa16.08■□□□□ 0.17
SRSF1-204ENST00000581979 C8orf58Q8NAV2 365 aa16.08■□□□□ 0.17
SRSF1-204ENST00000581979 SSH1Q8WYL5 1049 aa16.08■□□□□ 0.17
SRSF1-204ENST00000581979 USP42Q9H9J4 1324 aaKnown RBP16.08■□□□□ 0.16
SRSF1-204ENST00000581979 SIPA1L3O60292 1781 aaPredicted RBP16.07■□□□□ 0.16
SRSF1-204ENST00000581979 C10orf71Q711Q0 1435 aa16.07■□□□□ 0.16
SRSF1-204ENST00000581979 TEFQ10587 303 aa16.07■□□□□ 0.16
SRSF1-204ENST00000581979 BABAM1Q9NWV8 329 aa16.07■□□□□ 0.16
SRSF1-204ENST00000581979 SOS1Q07889 1333 aaPredicted RBP16.07■□□□□ 0.16
SRSF1-204ENST00000581979 TGFB2P61812 414 aa16.06■□□□□ 0.16
SRSF1-204ENST00000581979 PDE3AQ14432 1141 aa16.06■□□□□ 0.16
SRSF1-204ENST00000581979 ZKSCAN2Q63HK3 967 aa16.06■□□□□ 0.16
SRSF1-204ENST00000581979 SRP68Q9UHB9 627 aaKnown RBP16.06■□□□□ 0.16
SRSF1-204ENST00000581979 KIAA1551Q9HCM1 1747 aa16.06■□□□□ 0.16
SRSF1-204ENST00000581979 PXDNLA1KZ92 1463 aa16.06■□□□□ 0.16
SRSF1-204ENST00000581979 KDM3BQ7LBC6 1761 aa16.06■□□□□ 0.16
SRSF1-204ENST00000581979 B4GALNT3Q6L9W6 998 aa16.05■□□□□ 0.16
SRSF1-204ENST00000581979 ZNF790Q6PG37 636 aa16.05■□□□□ 0.16
SRSF1-204ENST00000581979 TTC5Q8N0Z6 440 aa16.05■□□□□ 0.16
SRSF1-204ENST00000581979 PARP3Q9Y6F1 533 aa16.05■□□□□ 0.16
SRSF1-204ENST00000581979 KIF16BQ96L93 1317 aa16.05■□□□□ 0.16
SRSF1-204ENST00000581979 KRT24Q2M2I5 525 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms