RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 C1orf115Q9H7X2 142 aa18.44■□□□□ 0.54
MKS1-211ENST00000581761 PDZRN3Q9UPQ7 1066 aa18.44■□□□□ 0.54
MKS1-211ENST00000581761 PDE4AP27815 886 aa18.43■□□□□ 0.54
MKS1-211ENST00000581761 ZCRB1Q8TBF4 217 aaKnown RBP18.43■□□□□ 0.54
MKS1-211ENST00000581761 TNS2Q63HR2 1409 aa18.42■□□□□ 0.54
MKS1-211ENST00000581761 MRC1P22897 1456 aa18.42■□□□□ 0.54
MKS1-211ENST00000581761 CCT4P50991 539 aaKnown RBP18.42■□□□□ 0.54
MKS1-211ENST00000581761 FKBP5Q13451 457 aaPredicted RBP18.42■□□□□ 0.54
MKS1-211ENST00000581761 FAM196AQ6ZSG2 479 aa18.42■□□□□ 0.54
MKS1-211ENST00000581761 CACNA1FO60840 1977 aa18.42■□□□□ 0.54
MKS1-211ENST00000581761 PCDH11XQ9BZA7 1347 aa18.42■□□□□ 0.54
MKS1-211ENST00000581761 PCDH11YQ9BZA8 1340 aa18.42■□□□□ 0.54
MKS1-211ENST00000581761 F6X3S4 739 aa18.41■□□□□ 0.54
MKS1-211ENST00000581761 SLC4A10Q6U841 1118 aa18.41■□□□□ 0.54
MKS1-211ENST00000581761 BAG6P46379 1132 aa18.4■□□□□ 0.54
MKS1-211ENST00000581761 HEG1Q9ULI3 1381 aa18.4■□□□□ 0.54
MKS1-211ENST00000581761 GIGYF1O75420 1035 aaPredicted RBP18.39■□□□□ 0.53
MKS1-211ENST00000581761 CABP4P57796 275 aa18.39■□□□□ 0.53
MKS1-211ENST00000581761 SMC5Q8IY18 1101 aa18.39■□□□□ 0.53
MKS1-211ENST00000581761 NFATC2IPQ8NCF5 419 aa18.39■□□□□ 0.53
MKS1-211ENST00000581761 BACH2Q9BYV9 841 aa18.39■□□□□ 0.53
MKS1-211ENST00000581761 CHPF2Q9P2E5 772 aa18.39■□□□□ 0.53
MKS1-211ENST00000581761 TRIM37O94972 964 aa18.38■□□□□ 0.53
MKS1-211ENST00000581761 SLC39A6Q13433 755 aa18.38■□□□□ 0.53
MKS1-211ENST00000581761 ZNF790Q6PG37 636 aa18.38■□□□□ 0.53
MKS1-211ENST00000581761 PTF1AQ7RTS3 328 aa18.38■□□□□ 0.53
MKS1-211ENST00000581761 PHAXQ9H814 394 aaKnown RBP18.37■□□□□ 0.53
MKS1-211ENST00000581761 PXDNLA1KZ92 1463 aa18.37■□□□□ 0.53
MKS1-211ENST00000581761 BCL9O00512 1426 aa18.36■□□□□ 0.53
MKS1-211ENST00000581761 EN1Q05925 392 aaPredicted RBP18.36■□□□□ 0.53
MKS1-211ENST00000581761 FAM161AQ3B820 660 aa18.36■□□□□ 0.53
MKS1-211ENST00000581761 TTC5Q8N0Z6 440 aa18.36■□□□□ 0.53
MKS1-211ENST00000581761 DDX54Q8TDD1 881 aaKnown RBP18.36■□□□□ 0.53
MKS1-211ENST00000581761 MEIS3Q99687 375 aa18.36■□□□□ 0.53
MKS1-211ENST00000581761 DBF4Q9UBU7 674 aaPredicted RBP18.35■□□□□ 0.53
MKS1-211ENST00000581761 PRAMEF22A3QJZ6 481 aa18.34■□□□□ 0.53
MKS1-211ENST00000581761 ANXA1P04083 346 aa18.34■□□□□ 0.53
MKS1-211ENST00000581761 NKX1-1Q15270 411 aaPredicted RBP18.34■□□□□ 0.53
MKS1-211ENST00000581761 SIRT2Q8IXJ6 389 aa18.34■□□□□ 0.53
MKS1-211ENST00000581761 GCC1Q96CN9 775 aa18.34■□□□□ 0.53
MKS1-211ENST00000581761 SHANK3Q9BYB0 1731 aa18.34■□□□□ 0.53
MKS1-211ENST00000581761 N4BP2Q86UW6 1770 aaPredicted RBP18.33■□□□□ 0.53
MKS1-211ENST00000581761 ERVV-2B6SEH9 535 aa18.33■□□□□ 0.52
MKS1-211ENST00000581761 KCNQ2O43526 872 aa18.33■□□□□ 0.52
MKS1-211ENST00000581761 APBA3O96018 575 aa18.33■□□□□ 0.52
MKS1-211ENST00000581761 RPAP2Q8IXW5 612 aaPredicted RBP18.33■□□□□ 0.52
MKS1-211ENST00000581761 ANKRD44Q8N8A2 993 aa18.33■□□□□ 0.52
MKS1-211ENST00000581761 ATP10DQ9P241 1426 aa18.32■□□□□ 0.52
MKS1-211ENST00000581761 TNS1Q9HBL0 1735 aaKnown RBP18.32■□□□□ 0.52
MKS1-211ENST00000581761 NUCB1Q02818 461 aa18.32■□□□□ 0.52
MKS1-211ENST00000581761 CEP85Q6P2H3 762 aa18.32■□□□□ 0.52
MKS1-211ENST00000581761 ZNF496Q96IT1 587 aaPredicted RBP18.32■□□□□ 0.52
MKS1-211ENST00000581761 FMNL2Q96PY5 1086 aa18.32■□□□□ 0.52
MKS1-211ENST00000581761 GNAI3P08754 354 aa18.31■□□□□ 0.52
MKS1-211ENST00000581761 ACSBG1Q96GR2 724 aa18.31■□□□□ 0.52
MKS1-211ENST00000581761 HYPKQ9NX55 129 aa18.31■□□□□ 0.52
MKS1-211ENST00000581761 C5P01031 1676 aa18.31■□□□□ 0.52
MKS1-211ENST00000581761 GNAI2P04899 355 aa18.3■□□□□ 0.52
MKS1-211ENST00000581761 SNRPA1P09661 255 aaKnown RBP18.3■□□□□ 0.52
MKS1-211ENST00000581761 PROSER3Q2NL68 480 aa18.3■□□□□ 0.52
MKS1-211ENST00000581761 C8orf34Q49A92 452 aa18.3■□□□□ 0.52
MKS1-211ENST00000581761 DNAAF4Q8WXU2 420 aa18.3■□□□□ 0.52
MKS1-211ENST00000581761 SBF2Q86WG5 1849 aa18.29■□□□□ 0.52
MKS1-211ENST00000581761 EZH2Q15910 746 aaKnown RBP18.29■□□□□ 0.52
MKS1-211ENST00000581761 CHD1LQ86WJ1 897 aa18.29■□□□□ 0.52
MKS1-211ENST00000581761 SRCIN1Q9C0H9 1055 aa18.29■□□□□ 0.52
MKS1-211ENST00000581761 BCL11BQ9C0K0 894 aaPredicted RBP18.29■□□□□ 0.52
MKS1-211ENST00000581761 DDX21Q9NR30 783 aaKnown RBP eCLIP18.29■□□□□ 0.52
MKS1-211ENST00000581761 PI4KAP2A4QPH2 592 aa18.28■□□□□ 0.52
MKS1-211ENST00000581761 ANKRD45Q5TZF3 282 aa18.28■□□□□ 0.52
MKS1-211ENST00000581761 PI4KAP1Q8N8J0 262 aa18.28■□□□□ 0.52
MKS1-211ENST00000581761 LNPKQ9C0E8 428 aa18.28■□□□□ 0.52
MKS1-211ENST00000581761 ADCY9O60503 1353 aa18.28■□□□□ 0.52
MKS1-211ENST00000581761 HMMRO75330 724 aa18.27■□□□□ 0.52
MKS1-211ENST00000581761 CAMKK2Q96RR4 588 aa18.27■□□□□ 0.52
MKS1-211ENST00000581761 DCTPP1Q9H773 170 aa18.27■□□□□ 0.52
MKS1-211ENST00000581761 PSDA5PKW4 1024 aaPredicted RBP18.26■□□□□ 0.51
MKS1-211ENST00000581761 DDX58O95786 925 aaKnown RBP18.26■□□□□ 0.51
MKS1-211ENST00000581761 ANP32AP39687 249 aaKnown RBP18.26■□□□□ 0.51
MKS1-211ENST00000581761 PDIA6Q15084 440 aa18.26■□□□□ 0.51
MKS1-211ENST00000581761 BEND3Q5T5X7 828 aa18.26■□□□□ 0.51
MKS1-211ENST00000581761 KSR2Q6VAB6 950 aa18.26■□□□□ 0.51
MKS1-211ENST00000581761 PAPPAQ13219 1627 aa18.25■□□□□ 0.51
MKS1-211ENST00000581761 UBTFL1P0CB47 393 aaPredicted RBP18.25■□□□□ 0.51
MKS1-211ENST00000581761 PRIM1P49642 420 aaKnown RBP18.25■□□□□ 0.51
MKS1-211ENST00000581761 NPM2Q86SE8 214 aaKnown RBP18.25■□□□□ 0.51
MKS1-211ENST00000581761 MAP3K2Q9Y2U5 619 aa18.25■□□□□ 0.51
MKS1-211ENST00000581761 TOGARAM1Q9Y4F4 1720 aa18.25■□□□□ 0.51
MKS1-211ENST00000581761 USP44Q9H0E7 712 aa18.24■□□□□ 0.51
MKS1-211ENST00000581761 TMOD3Q9NYL9 352 aa18.24■□□□□ 0.51
MKS1-211ENST00000581761 ZBTB47Q9UFB7 747 aaPredicted RBP18.24■□□□□ 0.51
MKS1-211ENST00000581761 USP16Q9Y5T5 823 aa18.24■□□□□ 0.51
MKS1-211ENST00000581761 LAMB4A4D0S4 1761 aa18.24■□□□□ 0.51
MKS1-211ENST00000581761 NHSQ6T4R5 1651 aa18.23■□□□□ 0.51
MKS1-211ENST00000581761 ALDH1L1O75891 902 aa18.23■□□□□ 0.51
MKS1-211ENST00000581761 MYL6BP14649 208 aa18.23■□□□□ 0.51
MKS1-211ENST00000581761 AIMP1Q12904 312 aaKnown RBP18.23■□□□□ 0.51
MKS1-211ENST00000581761 LRRFIP2Q9Y608 721 aaKnown RBP18.23■□□□□ 0.51
MKS1-211ENST00000581761 KCPQ6ZWJ8 1503 aa18.23■□□□□ 0.51
MKS1-211ENST00000581761 ATP8B2P98198 1209 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms