RNA–Protein interactions for RNA: ENST00000581487.1

CMTM4-205, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

Gene CMTM4, Length 7,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-205ENST00000581487 PDRG1Q9NUG6 133 aa8.63□□□□□ -1.03
CMTM4-205ENST00000581487 EXOC6BQ9Y2D4 811 aa8.63□□□□□ -1.03
CMTM4-205ENST00000581487 BAG4O95429 457 aaKnown RBP8.63□□□□□ -1.03
CMTM4-205ENST00000581487 MX1P20591 662 aa8.63□□□□□ -1.03
CMTM4-205ENST00000581487 LARP1BQ659C4 914 aaKnown RBP8.63□□□□□ -1.03
CMTM4-205ENST00000581487 TXNDC2Q86VQ3 553 aa8.63□□□□□ -1.03
CMTM4-205ENST00000581487 RPUSD2Q8IZ73 545 aaKnown RBP8.63□□□□□ -1.03
CMTM4-205ENST00000581487 MICALL1Q8N3F8 863 aa8.63□□□□□ -1.03
CMTM4-205ENST00000581487 PLEKHH1Q9ULM0 1364 aa8.63□□□□□ -1.03
CMTM4-205ENST00000581487 PTPN14Q15678 1187 aa8.63□□□□□ -1.03
CMTM4-205ENST00000581487 KIAA1328Q86T90 577 aa8.63□□□□□ -1.03
CMTM4-205ENST00000581487 ZNF652Q9Y2D9 606 aa8.63□□□□□ -1.03
CMTM4-205ENST00000581487 RRS1Q15050 365 aaKnown RBP8.63□□□□□ -1.03
CMTM4-205ENST00000581487 NOL3O60936 208 aaKnown RBP8.62□□□□□ -1.03
CMTM4-205ENST00000581487 ATP6V1E2Q96A05 226 aa8.62□□□□□ -1.03
CMTM4-205ENST00000581487 TSNARE1Q96NA8 513 aa8.62□□□□□ -1.03
CMTM4-205ENST00000581487 RASSF4Q9H2L5 321 aa8.62□□□□□ -1.03
CMTM4-205ENST00000581487 SLC52A1Q9NWF4 448 aa8.62□□□□□ -1.03
CMTM4-205ENST00000581487 ERCC5P28715 1186 aaPredicted RBP8.62□□□□□ -1.03
CMTM4-205ENST00000581487 ARID4AP29374 1257 aaPredicted RBP8.62□□□□□ -1.03
CMTM4-205ENST00000581487 RALYLQ86SE5 291 aaKnown RBP8.62□□□□□ -1.03
CMTM4-205ENST00000581487 FAM114A1Q8IWE2 563 aa8.62□□□□□ -1.03
CMTM4-205ENST00000581487 KIF3CO14782 793 aa8.62□□□□□ -1.03
CMTM4-205ENST00000581487 KIF5CO60282 957 aa8.62□□□□□ -1.03
CMTM4-205ENST00000581487 CEBPZQ03701 1054 aaKnown RBP8.62□□□□□ -1.03
CMTM4-205ENST00000581487 CCDC96Q2M329 555 aa8.62□□□□□ -1.03
CMTM4-205ENST00000581487 NUP62CLQ9H1M0 184 aa8.62□□□□□ -1.03
CMTM4-205ENST00000581487 MAGEC2Q9UBF1 373 aaPredicted RBP8.62□□□□□ -1.03
CMTM4-205ENST00000581487 MTMR7Q9Y216 660 aa8.62□□□□□ -1.03
CMTM4-205ENST00000581487 WASHC4Q2M389 1173 aa8.62□□□□□ -1.03
CMTM4-205ENST00000581487 FILIP1Q7Z7B0 1213 aa8.62□□□□□ -1.03
CMTM4-205ENST00000581487 WHAMMQ8TF30 809 aa8.62□□□□□ -1.03
CMTM4-205ENST00000581487 JAKMIP1Q96N16 626 aaKnown RBP8.62□□□□□ -1.03
CMTM4-205ENST00000581487 ZNF692Q9BU19 519 aaPredicted RBP8.62□□□□□ -1.03
CMTM4-205ENST00000581487 BRPF1P55201 1214 aaPredicted RBP8.62□□□□□ -1.03
CMTM4-205ENST00000581487 STK3Q13188 491 aa8.62□□□□□ -1.03
CMTM4-205ENST00000581487 ZNF396Q96N95 335 aaPredicted RBP8.62□□□□□ -1.03
CMTM4-205ENST00000581487 BRMS1Q9HCU9 246 aa8.62□□□□□ -1.03
CMTM4-205ENST00000581487 IQGAP2Q13576 1575 aa8.61□□□□□ -1.03
CMTM4-205ENST00000581487 NUTM1Q86Y26 1132 aa8.61□□□□□ -1.03
CMTM4-205ENST00000581487 CERS3Q8IU89 383 aa8.61□□□□□ -1.03
CMTM4-205ENST00000581487 TESK2Q96S53 571 aa8.61□□□□□ -1.03
CMTM4-205ENST00000581487 CRACR2AQ9BSW2 395 aa8.61□□□□□ -1.03
CMTM4-205ENST00000581487 SRGAP3O43295 1099 aa8.61□□□□□ -1.03
CMTM4-205ENST00000581487 CASQ1P31415 396 aa8.61□□□□□ -1.03
CMTM4-205ENST00000581487 SPATA32Q96LK8 384 aa8.61□□□□□ -1.03
CMTM4-205ENST00000581487 PPP6R1Q9UPN7 881 aa8.61□□□□□ -1.03
CMTM4-205ENST00000581487 TNNQ9UQP3 1299 aa8.61□□□□□ -1.03
CMTM4-205ENST00000581487 RTEL1-TNFRSF6BF6WH68 1400 aa8.61□□□□□ -1.03
CMTM4-205ENST00000581487 STK38Q15208 465 aa8.61□□□□□ -1.03
CMTM4-205ENST00000581487 ANKRD1Q15327 319 aa8.61□□□□□ -1.03
CMTM4-205ENST00000581487 TMX1Q9H3N1 280 aa8.61□□□□□ -1.03
CMTM4-205ENST00000581487 RSPH14Q9UHP6 348 aa8.61□□□□□ -1.03
CMTM4-205ENST00000581487 PER1O15534 1290 aaPredicted RBP8.61□□□□□ -1.03
CMTM4-205ENST00000581487 SERPINC1P01008 464 aa8.61□□□□□ -1.03
CMTM4-205ENST00000581487 HMGB1P1B2RPK0 211 aaPredicted RBP8.61□□□□□ -1.03
CMTM4-205ENST00000581487 GOLIM4O00461 696 aa8.61□□□□□ -1.03
CMTM4-205ENST00000581487 EVA1CP58658 441 aa8.61□□□□□ -1.03
CMTM4-205ENST00000581487 CWC27Q6UX04 472 aaKnown RBP8.61□□□□□ -1.03
CMTM4-205ENST00000581487 UBE4AQ14139 1066 aa8.6□□□□□ -1.03
CMTM4-205ENST00000581487 PRIMPOLQ96LW4 560 aa8.6□□□□□ -1.03
CMTM4-205ENST00000581487 SWAP70Q9UH65 585 aa8.6□□□□□ -1.03
CMTM4-205ENST00000581487 SEC24BO95487 1268 aa8.6□□□□□ -1.03
CMTM4-205ENST00000581487 KIF18AQ8NI77 898 aa8.6□□□□□ -1.03
CMTM4-205ENST00000581487 UGGT2Q9NYU1 1516 aa8.6□□□□□ -1.03
CMTM4-205ENST00000581487 KDM2BQ8NHM5 1336 aa8.6□□□□□ -1.03
CMTM4-205ENST00000581487 IVLP07476 585 aa8.6□□□□□ -1.03
CMTM4-205ENST00000581487 TXLNAP40222 546 aa8.6□□□□□ -1.03
CMTM4-205ENST00000581487 NUCB1Q02818 461 aa8.6□□□□□ -1.03
CMTM4-205ENST00000581487 SAFBQ15424 915 aaKnown RBP eCLIP8.6□□□□□ -1.03
CMTM4-205ENST00000581487 C16orf45Q96MC5 204 aaPredicted RBP8.6□□□□□ -1.03
CMTM4-205ENST00000581487 MCM5P33992 734 aa8.6□□□□□ -1.03
CMTM4-205ENST00000581487 KIF5AQ12840 1032 aa8.6□□□□□ -1.03
CMTM4-205ENST00000581487 LRRFIP2Q9Y608 721 aaKnown RBP8.6□□□□□ -1.03
CMTM4-205ENST00000581487 EMILIN1Q9Y6C2 1016 aa8.6□□□□□ -1.03
CMTM4-205ENST00000581487 TCOF1Q13428 1488 aaKnown RBP8.6□□□□□ -1.03
CMTM4-205ENST00000581487 IL16Q14005 1332 aa8.6□□□□□ -1.03
CMTM4-205ENST00000581487 NCAPGQ9BPX3 1015 aa8.6□□□□□ -1.03
CMTM4-205ENST00000581487 GBP3Q9H0R5 595 aa8.6□□□□□ -1.03
CMTM4-205ENST00000581487 CACYBPQ9HB71 228 aaKnown RBP8.6□□□□□ -1.03
CMTM4-205ENST00000581487 USP25Q9UHP3 1055 aa8.6□□□□□ -1.03
CMTM4-205ENST00000581487 GBP6Q6ZN66 633 aa8.6□□□□□ -1.03
CMTM4-205ENST00000581487 MCM10Q7L590 875 aa8.6□□□□□ -1.03
CMTM4-205ENST00000581487 FERMT3Q86UX7 667 aa8.6□□□□□ -1.03
CMTM4-205ENST00000581487 PSPC1Q8WXF1 523 aaKnown RBP8.6□□□□□ -1.03
CMTM4-205ENST00000581487 DACT3Q96B18 629 aaPredicted RBP8.6□□□□□ -1.03
CMTM4-205ENST00000581487 ZRANB2O95218 330 aaKnown RBP eCLIP8.59□□□□□ -1.03
CMTM4-205ENST00000581487 POTEJP0CG39 1038 aa8.59□□□□□ -1.03
CMTM4-205ENST00000581487 RLBP1P12271 317 aa8.59□□□□□ -1.03
CMTM4-205ENST00000581487 PSME1Q06323 249 aa8.59□□□□□ -1.03
CMTM4-205ENST00000581487 CCDC174Q6PII3 467 aa8.59□□□□□ -1.03
CMTM4-205ENST00000581487 BLOC1S2Q6QNY1 142 aa8.59□□□□□ -1.03
CMTM4-205ENST00000581487 ZNF354CQ86Y25 554 aa8.59□□□□□ -1.03
CMTM4-205ENST00000581487 RIOK3O14730 519 aaKnown RBP8.59□□□□□ -1.03
CMTM4-205ENST00000581487 NDC80O14777 642 aa8.59□□□□□ -1.03
CMTM4-205ENST00000581487 CCDC183Q5T5S1 534 aa8.59□□□□□ -1.03
CMTM4-205ENST00000581487 WDR66Q8TBY9 1149 aa8.59□□□□□ -1.03
CMTM4-205ENST00000581487 SNX21Q969T3 373 aa8.59□□□□□ -1.03
CMTM4-205ENST00000581487 A0A1B0GUL7 405 aa8.59□□□□□ -1.03
CMTM4-205ENST00000581487 MAP3K11Q16584 847 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms