RNA–Protein interactions for RNA: ENST00000581356.1

SLC9A3R1-204, Transcript of SLC9A3 regulator 1, humanhuman

TSL 3

Gene SLC9A3R1, Length 519 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R1-204ENST00000581356 PRKRIP1Q9H875 184 aaPredicted RBP16.8■□□□□ 0.28
SLC9A3R1-204ENST00000581356 C4AP0C0L4 1744 aa16.79■□□□□ 0.28
SLC9A3R1-204ENST00000581356 ZPR1O75312 459 aa16.79■□□□□ 0.28
SLC9A3R1-204ENST00000581356 FKBP8Q14318 412 aa16.79■□□□□ 0.28
SLC9A3R1-204ENST00000581356 TEX13AQ9BXU3 409 aaPredicted RBP16.79■□□□□ 0.28
SLC9A3R1-204ENST00000581356 TAF7Q15545 349 aaPredicted RBP16.78■□□□□ 0.28
SLC9A3R1-204ENST00000581356 USPL1Q5W0Q7 1092 aa16.78■□□□□ 0.28
SLC9A3R1-204ENST00000581356 MIS18AQ9NYP9 233 aa16.78■□□□□ 0.28
SLC9A3R1-204ENST00000581356 PARP3Q9Y6F1 533 aa16.78■□□□□ 0.28
SLC9A3R1-204ENST00000581356 COL15A1P39059 1388 aa16.77■□□□□ 0.28
SLC9A3R1-204ENST00000581356 YBX3P16989 372 aaKnown RBP eCLIP16.77■□□□□ 0.28
SLC9A3R1-204ENST00000581356 A1BGP04217 495 aa16.76■□□□□ 0.27
SLC9A3R1-204ENST00000581356 EIF5P55010 431 aaKnown RBP16.76■□□□□ 0.27
SLC9A3R1-204ENST00000581356 THUMPD2Q9BTF0 503 aaKnown RBP16.76■□□□□ 0.27
SLC9A3R1-204ENST00000581356 NARFQ9UHQ1 456 aa16.76■□□□□ 0.27
SLC9A3R1-204ENST00000581356 USP16Q9Y5T5 823 aa16.76■□□□□ 0.27
SLC9A3R1-204ENST00000581356 UTRNP46939 3433 aa16.75■□□□□ 0.27
SLC9A3R1-204ENST00000581356 DLG5Q8TDM6 1919 aa16.75■□□□□ 0.27
SLC9A3R1-204ENST00000581356 PRAMEF22A3QJZ6 481 aa16.75■□□□□ 0.27
SLC9A3R1-204ENST00000581356 WDR43Q15061 677 aaKnown RBP eCLIP16.75■□□□□ 0.27
SLC9A3R1-204ENST00000581356 WWC3Q9ULE0 1092 aa16.75■□□□□ 0.27
SLC9A3R1-204ENST00000581356 ZNF330Q9Y3S2 320 aaPredicted RBP16.75■□□□□ 0.27
SLC9A3R1-204ENST00000581356 ZNF316A6NFI3 1004 aaPredicted RBP16.74■□□□□ 0.27
SLC9A3R1-204ENST00000581356 SNRPA1P09661 255 aaKnown RBP16.74■□□□□ 0.27
SLC9A3R1-204ENST00000581356 TM4SF1P30408 202 aa16.74■□□□□ 0.27
SLC9A3R1-204ENST00000581356 RIPK4P57078 832 aa16.74■□□□□ 0.27
SLC9A3R1-204ENST00000581356 DDR1Q08345 913 aa16.74■□□□□ 0.27
SLC9A3R1-204ENST00000581356 CCDC146Q8IYE0 955 aa16.74■□□□□ 0.27
SLC9A3R1-204ENST00000581356 A0A087WZG4 1122 aa16.73■□□□□ 0.27
SLC9A3R1-204ENST00000581356 PNISRQ8TF01 805 aaKnown RBP16.73■□□□□ 0.27
SLC9A3R1-204ENST00000581356 BCL2L12Q9HB09 334 aa16.73■□□□□ 0.27
SLC9A3R1-204ENST00000581356 ADAMTS8Q9UP79 889 aa16.73■□□□□ 0.27
SLC9A3R1-204ENST00000581356 POLRMTO00411 1230 aaKnown RBP16.72■□□□□ 0.27
SLC9A3R1-204ENST00000581356 GRIN3BO60391 1043 aa16.72■□□□□ 0.27
SLC9A3R1-204ENST00000581356 IL6STP40189 918 aaPredicted RBP16.72■□□□□ 0.27
SLC9A3R1-204ENST00000581356 TMPOP42166 694 aaKnown RBP16.72■□□□□ 0.27
SLC9A3R1-204ENST00000581356 PIP4K2AP48426 406 aaPredicted RBP16.72■□□□□ 0.27
SLC9A3R1-204ENST00000581356 TBC1D2BQ9UPU7 963 aa16.72■□□□□ 0.27
SLC9A3R1-204ENST00000581356 RRP7AQ9Y3A4 280 aaKnown RBP16.72■□□□□ 0.27
SLC9A3R1-204ENST00000581356 GOLGB1Q14789 3259 aaKnown RBP16.72■□□□□ 0.27
SLC9A3R1-204ENST00000581356 C10orf71Q711Q0 1435 aa16.71■□□□□ 0.27
SLC9A3R1-204ENST00000581356 A0A0G2JLW4 131 aa16.71■□□□□ 0.27
SLC9A3R1-204ENST00000581356 TGFB2P61812 414 aa16.71■□□□□ 0.27
SLC9A3R1-204ENST00000581356 NFIXQ14938 502 aa16.71■□□□□ 0.27
SLC9A3R1-204ENST00000581356 NEUROD2Q15784 382 aa16.71■□□□□ 0.27
SLC9A3R1-204ENST00000581356 NPM2Q86SE8 214 aaKnown RBP16.7■□□□□ 0.26
SLC9A3R1-204ENST00000581356 RUNDC1Q96C34 613 aa16.7■□□□□ 0.26
SLC9A3R1-204ENST00000581356 PXDNLA1KZ92 1463 aa16.69■□□□□ 0.26
SLC9A3R1-204ENST00000581356 DPEP1P16444 411 aa16.69■□□□□ 0.26
SLC9A3R1-204ENST00000581356 BICDL1Q6ZP65 573 aa16.69■□□□□ 0.26
SLC9A3R1-204ENST00000581356 KIF13BQ9NQT8 1826 aa16.68■□□□□ 0.26
SLC9A3R1-204ENST00000581356 EIF4A1P60842 406 aaKnown RBP16.68■□□□□ 0.26
SLC9A3R1-204ENST00000581356 LMOD3Q0VAK6 560 aa16.68■□□□□ 0.26
SLC9A3R1-204ENST00000581356 CHD4Q14839 1912 aa16.67■□□□□ 0.26
SLC9A3R1-204ENST00000581356 NBPF26B4DH59 902 aa16.67■□□□□ 0.26
SLC9A3R1-204ENST00000581356 GIGYF1O75420 1035 aaPredicted RBP16.67■□□□□ 0.26
SLC9A3R1-204ENST00000581356 SERPINB2P05120 415 aa16.67■□□□□ 0.26
SLC9A3R1-204ENST00000581356 TBC1D9BQ66K14 1250 aa16.67■□□□□ 0.26
SLC9A3R1-204ENST00000581356 NBPF10Q6P3W6 841 aaKnown RBP16.67■□□□□ 0.26
SLC9A3R1-204ENST00000581356 DZIP3Q86Y13 1208 aaKnown RBP16.67■□□□□ 0.26
SLC9A3R1-204ENST00000581356 NBPF15Q8N660 670 aa16.67■□□□□ 0.26
SLC9A3R1-204ENST00000581356 TSPYL4Q9UJ04 414 aa16.67■□□□□ 0.26
SLC9A3R1-204ENST00000581356 N4BP2Q86UW6 1770 aaPredicted RBP16.66■□□□□ 0.26
SLC9A3R1-204ENST00000581356 CAMTA2O94983 1202 aa16.66■□□□□ 0.26
SLC9A3R1-204ENST00000581356 KDM3BQ7LBC6 1761 aa16.66■□□□□ 0.26
SLC9A3R1-204ENST00000581356 KIAA1551Q9HCM1 1747 aa16.65■□□□□ 0.26
SLC9A3R1-204ENST00000581356 KCNA3P22001 575 aa16.65■□□□□ 0.26
SLC9A3R1-204ENST00000581356 ZNF784Q8NCA9 323 aaPredicted RBP16.65■□□□□ 0.26
SLC9A3R1-204ENST00000581356 TRIM35Q9UPQ4 493 aa16.65■□□□□ 0.26
SLC9A3R1-204ENST00000581356 BCS1LQ9Y276 419 aa16.65■□□□□ 0.26
SLC9A3R1-204ENST00000581356 CCDC184Q52MB2 194 aa16.64■□□□□ 0.25
SLC9A3R1-204ENST00000581356 CHRNA5P30532 468 aa16.63■□□□□ 0.25
SLC9A3R1-204ENST00000581356 BABAM1Q9NWV8 329 aa16.63■□□□□ 0.25
SLC9A3R1-204ENST00000581356 PIM2Q9P1W9 311 aa16.63■□□□□ 0.25
SLC9A3R1-204ENST00000581356 NGEFQ8N5V2 710 aa16.62■□□□□ 0.25
SLC9A3R1-204ENST00000581356 SETDB2Q96T68 719 aa16.62■□□□□ 0.25
SLC9A3R1-204ENST00000581356 LAS1LQ9Y4W2 734 aaKnown RBP16.62■□□□□ 0.25
SLC9A3R1-204ENST00000581356 SCN7AQ01118 1682 aa16.62■□□□□ 0.25
SLC9A3R1-204ENST00000581356 AFDNP55196 1824 aaKnown RBP16.61■□□□□ 0.25
SLC9A3R1-204ENST00000581356 APAF1O14727 1248 aa16.61■□□□□ 0.25
SLC9A3R1-204ENST00000581356 NRXN2Q9P2S2 1712 aa16.6■□□□□ 0.25
SLC9A3R1-204ENST00000581356 CHL1O00533 1208 aa16.6■□□□□ 0.25
SLC9A3R1-204ENST00000581356 ANP32CO43423 234 aa16.6■□□□□ 0.25
SLC9A3R1-204ENST00000581356 MYL6BP14649 208 aa16.6■□□□□ 0.25
SLC9A3R1-204ENST00000581356 CLEC4GQ6UXB4 293 aa16.6■□□□□ 0.25
SLC9A3R1-204ENST00000581356 CCDC24Q8N4L8 307 aa16.6■□□□□ 0.25
SLC9A3R1-204ENST00000581356 CARMIL3Q8ND23 1372 aa16.6■□□□□ 0.25
SLC9A3R1-204ENST00000581356 LAMB4A4D0S4 1761 aa16.59■□□□□ 0.25
SLC9A3R1-204ENST00000581356 EIF2S2P20042 333 aaKnown RBP16.59■□□□□ 0.25
SLC9A3R1-204ENST00000581356 DALRD3Q5D0E6 543 aaKnown RBP16.59■□□□□ 0.25
SLC9A3R1-204ENST00000581356 PRR5LQ6MZQ0 368 aa16.59■□□□□ 0.25
SLC9A3R1-204ENST00000581356 ZNF652Q9Y2D9 606 aa16.59■□□□□ 0.25
SLC9A3R1-204ENST00000581356 HLFQ16534 295 aa16.58■□□□□ 0.24
SLC9A3R1-204ENST00000581356 ARHGAP27Q6ZUM4 889 aa16.58■□□□□ 0.24
SLC9A3R1-204ENST00000581356 C2CD5Q86YS7 1000 aa16.58■□□□□ 0.24
SLC9A3R1-204ENST00000581356 BCORQ6W2J9 1755 aa16.58■□□□□ 0.24
SLC9A3R1-204ENST00000581356 NPHP1O15259 732 aa16.57■□□□□ 0.24
SLC9A3R1-204ENST00000581356 KRT24Q2M2I5 525 aa16.57■□□□□ 0.24
SLC9A3R1-204ENST00000581356 TTLL7Q6ZT98 887 aa16.57■□□□□ 0.24
SLC9A3R1-204ENST00000581356 CNBD1Q8NA66 436 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms