RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 SOS1Q07889 1333 aaPredicted RBP15.86■□□□□ 0.13
CTDNEP1-212ENST00000576613 DLEC1Q9Y238 1755 aa15.85■□□□□ 0.13
CTDNEP1-212ENST00000576613 KLRG1Q96E93 195 aa15.85■□□□□ 0.13
CTDNEP1-212ENST00000576613 RRAGCQ9HB90 399 aa15.85■□□□□ 0.13
CTDNEP1-212ENST00000576613 COL15A1P39059 1388 aa15.85■□□□□ 0.13
CTDNEP1-212ENST00000576613 NRXN2Q9P2S2 1712 aa15.85■□□□□ 0.13
CTDNEP1-212ENST00000576613 NARFQ9UHQ1 456 aa15.84■□□□□ 0.13
CTDNEP1-212ENST00000576613 CYP19A1P11511 503 aaPredicted RBP15.83■□□□□ 0.12
CTDNEP1-212ENST00000576613 SMC1BQ8NDV3 1235 aa15.83■□□□□ 0.12
CTDNEP1-212ENST00000576613 PCGF6Q9BYE7 350 aa15.83■□□□□ 0.12
CTDNEP1-212ENST00000576613 LMNB1P20700 586 aa15.82■□□□□ 0.12
CTDNEP1-212ENST00000576613 HTRA3P83110 453 aa15.82■□□□□ 0.12
CTDNEP1-212ENST00000576613 NFIXQ14938 502 aa15.82■□□□□ 0.12
CTDNEP1-212ENST00000576613 JMYQ8N9B5 988 aa15.82■□□□□ 0.12
CTDNEP1-212ENST00000576613 LGR6Q9HBX8 967 aa15.82■□□□□ 0.12
CTDNEP1-212ENST00000576613 TIAM2Q8IVF5 1701 aa15.82■□□□□ 0.12
CTDNEP1-212ENST00000576613 RNMTO43148 476 aaKnown RBP15.81■□□□□ 0.12
CTDNEP1-212ENST00000576613 RASSF7Q02833 373 aa15.81■□□□□ 0.12
CTDNEP1-212ENST00000576613 SLC39A6Q13433 755 aa15.81■□□□□ 0.12
CTDNEP1-212ENST00000576613 UBR2Q8IWV8 1755 aa15.81■□□□□ 0.12
CTDNEP1-212ENST00000576613 VSIG10Q8N0Z9 540 aa15.81■□□□□ 0.12
CTDNEP1-212ENST00000576613 ZBTB1Q9Y2K1 713 aa15.81■□□□□ 0.12
CTDNEP1-212ENST00000576613 SERPINB2P05120 415 aa15.8■□□□□ 0.12
CTDNEP1-212ENST00000576613 TTLL6Q8N841 843 aa15.8■□□□□ 0.12
CTDNEP1-212ENST00000576613 H0YIN7 160 aa15.79■□□□□ 0.12
CTDNEP1-212ENST00000576613 HMOX1P09601 288 aa15.79■□□□□ 0.12
CTDNEP1-212ENST00000576613 VEGFAP15692 232 aaPredicted RBP15.79■□□□□ 0.12
CTDNEP1-212ENST00000576613 GLTPD2A6NH11 291 aa15.78■□□□□ 0.12
CTDNEP1-212ENST00000576613 STARD3NLO95772 234 aa15.78■□□□□ 0.12
CTDNEP1-212ENST00000576613 AMER1Q5JTC6 1135 aaPredicted RBP15.78■□□□□ 0.12
CTDNEP1-212ENST00000576613 C2CD5Q86YS7 1000 aa15.78■□□□□ 0.12
CTDNEP1-212ENST00000576613 TTC5Q8N0Z6 440 aa15.78■□□□□ 0.12
CTDNEP1-212ENST00000576613 PCNTO95613 3336 aa15.78■□□□□ 0.12
CTDNEP1-212ENST00000576613 CCDC88AQ3V6T2 1871 aa15.78■□□□□ 0.12
CTDNEP1-212ENST00000576613 A0A087WZG4 1122 aa15.77■□□□□ 0.12
CTDNEP1-212ENST00000576613 CANXP27824 592 aaKnown RBP15.77■□□□□ 0.12
CTDNEP1-212ENST00000576613 MTHFSDQ2M296 383 aaKnown RBP15.77■□□□□ 0.12
CTDNEP1-212ENST00000576613 BCL2L12Q9HB09 334 aa15.77■□□□□ 0.12
CTDNEP1-212ENST00000576613 SCN7AQ01118 1682 aa15.76■□□□□ 0.11
CTDNEP1-212ENST00000576613 DIAPH1O60610 1272 aaKnown RBP15.76■□□□□ 0.11
CTDNEP1-212ENST00000576613 PDZRN3Q9UPQ7 1066 aa15.76■□□□□ 0.11
CTDNEP1-212ENST00000576613 CARMIL3Q8ND23 1372 aa15.75■□□□□ 0.11
CTDNEP1-212ENST00000576613 COL13A1Q5TAT6 717 aaPredicted RBP15.75■□□□□ 0.11
CTDNEP1-212ENST00000576613 EIF5P55010 431 aaKnown RBP15.74■□□□□ 0.11
CTDNEP1-212ENST00000576613 DPY19L2Q6NUT2 758 aa15.74■□□□□ 0.11
CTDNEP1-212ENST00000576613 BICDL1Q6ZP65 573 aa15.74■□□□□ 0.11
CTDNEP1-212ENST00000576613 TEX13AQ9BXU3 409 aaPredicted RBP15.74■□□□□ 0.11
CTDNEP1-212ENST00000576613 ANKRD31Q8N7Z5 1873 aa15.74■□□□□ 0.11
CTDNEP1-212ENST00000576613 NFKBIEO00221 500 aa15.73■□□□□ 0.11
CTDNEP1-212ENST00000576613 PDE6BP35913 854 aa15.73■□□□□ 0.11
CTDNEP1-212ENST00000576613 PRELPP51888 382 aa15.73■□□□□ 0.11
CTDNEP1-212ENST00000576613 TEFQ10587 303 aa15.73■□□□□ 0.11
CTDNEP1-212ENST00000576613 BRIP1Q9BX63 1249 aa15.73■□□□□ 0.11
CTDNEP1-212ENST00000576613 DICER1Q9UPY3 1922 aaKnown RBP15.72■□□□□ 0.11
CTDNEP1-212ENST00000576613 COL11A2P13942 1736 aaPredicted RBP15.72■□□□□ 0.11
CTDNEP1-212ENST00000576613 NPM2Q86SE8 214 aaKnown RBP15.72■□□□□ 0.11
CTDNEP1-212ENST00000576613 ZNF622Q969S3 477 aaKnown RBP eCLIP15.72■□□□□ 0.11
CTDNEP1-212ENST00000576613 HEG1Q9ULI3 1381 aa15.72■□□□□ 0.11
CTDNEP1-212ENST00000576613 SIPA1L3O60292 1781 aaPredicted RBP15.72■□□□□ 0.11
CTDNEP1-212ENST00000576613 FER1L6Q2WGJ9 1857 aa15.71■□□□□ 0.11
CTDNEP1-212ENST00000576613 KIF7Q2M1P5 1343 aa15.71■□□□□ 0.11
CTDNEP1-212ENST00000576613 TBC1D9BQ66K14 1250 aa15.71■□□□□ 0.11
CTDNEP1-212ENST00000576613 ZNF790Q6PG37 636 aa15.71■□□□□ 0.11
CTDNEP1-212ENST00000576613 TNS4Q8IZW8 715 aa15.71■□□□□ 0.11
CTDNEP1-212ENST00000576613 GAS2L2Q8NHY3 880 aa15.71■□□□□ 0.11
CTDNEP1-212ENST00000576613 ZNF496Q96IT1 587 aaPredicted RBP15.71■□□□□ 0.11
CTDNEP1-212ENST00000576613 ZNF330Q9Y3S2 320 aaPredicted RBP15.71■□□□□ 0.11
CTDNEP1-212ENST00000576613 GNAT3A8MTJ3 354 aa15.7■□□□□ 0.1
CTDNEP1-212ENST00000576613 NPHP1O15259 732 aa15.7■□□□□ 0.1
CTDNEP1-212ENST00000576613 IL6STP40189 918 aaPredicted RBP15.7■□□□□ 0.1
CTDNEP1-212ENST00000576613 ERFEQ4G0M1 354 aa15.7■□□□□ 0.1
CTDNEP1-212ENST00000576613 C21orf2O43822 256 aa15.69■□□□□ 0.1
CTDNEP1-212ENST00000576613 CC2D1BQ5T0F9 858 aaKnown RBP15.69■□□□□ 0.1
CTDNEP1-212ENST00000576613 PRR5LQ6MZQ0 368 aa15.69■□□□□ 0.1
CTDNEP1-212ENST00000576613 FMNL2Q96PY5 1086 aa15.69■□□□□ 0.1
CTDNEP1-212ENST00000576613 SETDB2Q96T68 719 aa15.69■□□□□ 0.1
CTDNEP1-212ENST00000576613 TBC1D2BQ9UPU7 963 aa15.69■□□□□ 0.1
CTDNEP1-212ENST00000576613 LTBP3Q9NS15 1303 aa15.68■□□□□ 0.1
CTDNEP1-212ENST00000576613 CACNA1SQ13698 1873 aa15.68■□□□□ 0.1
CTDNEP1-212ENST00000576613 BCORQ6W2J9 1755 aa15.68■□□□□ 0.1
CTDNEP1-212ENST00000576613 ARFGEF2Q9Y6D5 1785 aa15.68■□□□□ 0.1
CTDNEP1-212ENST00000576613 COL3A1P02461 1466 aaPredicted RBP15.68■□□□□ 0.1
CTDNEP1-212ENST00000576613 U2SURPO15042 1029 aaKnown RBP15.68■□□□□ 0.1
CTDNEP1-212ENST00000576613 CAPN15O75808 1086 aa15.68■□□□□ 0.1
CTDNEP1-212ENST00000576613 HSPA1AP0DMV8 641 aaKnown RBP15.68■□□□□ 0.1
CTDNEP1-212ENST00000576613 HSPA1BP0DMV9 641 aaKnown RBP15.68■□□□□ 0.1
CTDNEP1-212ENST00000576613 CNBD1Q8NA66 436 aa15.68■□□□□ 0.1
CTDNEP1-212ENST00000576613 CCER1Q8TC90 406 aaPredicted RBP15.68■□□□□ 0.1
CTDNEP1-212ENST00000576613 TAOK3Q9H2K8 898 aa15.68■□□□□ 0.1
CTDNEP1-212ENST00000576613 ZNF219Q9P2Y4 722 aaPredicted RBP15.68■□□□□ 0.1
CTDNEP1-212ENST00000576613 POTECB2RU33 542 aa15.67■□□□□ 0.1
CTDNEP1-212ENST00000576613 PER1O15534 1290 aaPredicted RBP15.67■□□□□ 0.1
CTDNEP1-212ENST00000576613 ST5P78524 1137 aa15.67■□□□□ 0.1
CTDNEP1-212ENST00000576613 SOGA3Q5TF21 947 aa15.67■□□□□ 0.1
CTDNEP1-212ENST00000576613 IL17REQ8NFR9 667 aa15.67■□□□□ 0.1
CTDNEP1-212ENST00000576613 CNKSR1Q969H4 720 aa15.67■□□□□ 0.1
CTDNEP1-212ENST00000576613 STYK1Q6J9G0 422 aa15.66■□□□□ 0.1
CTDNEP1-212ENST00000576613 CCDC24Q8N4L8 307 aa15.66■□□□□ 0.1
CTDNEP1-212ENST00000576613 CHADLQ6NUI6 762 aa15.65■□□□□ 0.1
CTDNEP1-212ENST00000576613 CEMIPQ8WUJ3 1361 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms