RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 A0A0G2JLW4 131 aa15.87■□□□□ 0.13
LITAF-219ENST00000576334 PARP3Q9Y6F1 533 aa15.87■□□□□ 0.13
LITAF-219ENST00000576334 DLG5Q8TDM6 1919 aa15.87■□□□□ 0.13
LITAF-219ENST00000576334 HEG1Q9ULI3 1381 aa15.87■□□□□ 0.13
LITAF-219ENST00000576334 C10orf71Q711Q0 1435 aa15.86■□□□□ 0.13
LITAF-219ENST00000576334 BTBD11A6QL63 1104 aa15.86■□□□□ 0.13
LITAF-219ENST00000576334 PIP4K2AP48426 406 aaPredicted RBP15.86■□□□□ 0.13
LITAF-219ENST00000576334 VSIG10Q8N0Z9 540 aa15.86■□□□□ 0.13
LITAF-219ENST00000576334 BCL2L12Q9HB09 334 aa15.86■□□□□ 0.13
LITAF-219ENST00000576334 COL15A1P39059 1388 aa15.86■□□□□ 0.13
LITAF-219ENST00000576334 A1BGP04217 495 aa15.85■□□□□ 0.13
LITAF-219ENST00000576334 PLEKHF1Q96S99 279 aa15.85■□□□□ 0.13
LITAF-219ENST00000576334 MIS18AQ9NYP9 233 aa15.85■□□□□ 0.13
LITAF-219ENST00000576334 POLRMTO00411 1230 aaKnown RBP15.84■□□□□ 0.13
LITAF-219ENST00000576334 GRIN3BO60391 1043 aa15.84■□□□□ 0.13
LITAF-219ENST00000576334 ZPR1O75312 459 aa15.84■□□□□ 0.13
LITAF-219ENST00000576334 DPEP1P16444 411 aa15.84■□□□□ 0.13
LITAF-219ENST00000576334 TM4SF1P30408 202 aa15.84■□□□□ 0.13
LITAF-219ENST00000576334 RTF1Q92541 710 aaKnown RBP15.84■□□□□ 0.13
LITAF-219ENST00000576334 THUMPD2Q9BTF0 503 aaKnown RBP15.84■□□□□ 0.13
LITAF-219ENST00000576334 ZNF330Q9Y3S2 320 aaPredicted RBP15.84■□□□□ 0.13
LITAF-219ENST00000576334 AFDNP55196 1824 aaKnown RBP15.83■□□□□ 0.12
LITAF-219ENST00000576334 EIF5P55010 431 aaKnown RBP15.83■□□□□ 0.12
LITAF-219ENST00000576334 FMNL2Q96PY5 1086 aa15.83■□□□□ 0.12
LITAF-219ENST00000576334 NARFQ9UHQ1 456 aa15.83■□□□□ 0.12
LITAF-219ENST00000576334 USP16Q9Y5T5 823 aa15.83■□□□□ 0.12
LITAF-219ENST00000576334 STARD3NLO95772 234 aa15.82■□□□□ 0.12
LITAF-219ENST00000576334 KCNA3P22001 575 aa15.82■□□□□ 0.12
LITAF-219ENST00000576334 NFIXQ14938 502 aa15.82■□□□□ 0.12
LITAF-219ENST00000576334 TBC1D2BQ9UPU7 963 aa15.82■□□□□ 0.12
LITAF-219ENST00000576334 BRCA1P38398 1863 aaKnown RBP15.81■□□□□ 0.12
LITAF-219ENST00000576334 BICDL1Q6ZP65 573 aa15.81■□□□□ 0.12
LITAF-219ENST00000576334 BCS1LQ9Y276 419 aa15.81■□□□□ 0.12
LITAF-219ENST00000576334 CHRNA5P30532 468 aa15.8■□□□□ 0.12
LITAF-219ENST00000576334 TGFB2P61812 414 aa15.8■□□□□ 0.12
LITAF-219ENST00000576334 RALBP1Q15311 655 aa15.79■□□□□ 0.12
LITAF-219ENST00000576334 CCDC24Q8N4L8 307 aa15.79■□□□□ 0.12
LITAF-219ENST00000576334 TAF7Q15545 349 aaPredicted RBP15.78■□□□□ 0.12
LITAF-219ENST00000576334 NFE2L2Q16236 605 aa15.78■□□□□ 0.12
LITAF-219ENST00000576334 TBC1D9BQ66K14 1250 aa15.78■□□□□ 0.12
LITAF-219ENST00000576334 NRXN2Q9P2S2 1712 aa15.77■□□□□ 0.12
LITAF-219ENST00000576334 CARMIL3Q8ND23 1372 aa15.77■□□□□ 0.12
LITAF-219ENST00000576334 SCN7AQ01118 1682 aa15.77■□□□□ 0.12
LITAF-219ENST00000576334 HTATSF1O43719 755 aaKnown RBP15.77■□□□□ 0.12
LITAF-219ENST00000576334 CCDC146Q8IYE0 955 aa15.77■□□□□ 0.12
LITAF-219ENST00000576334 ZNF526Q8TF50 670 aaPredicted RBP15.77■□□□□ 0.12
LITAF-219ENST00000576334 TEX13AQ9BXU3 409 aaPredicted RBP15.77■□□□□ 0.12
LITAF-219ENST00000576334 ATP10DQ9P241 1426 aa15.77■□□□□ 0.11
LITAF-219ENST00000576334 SERPINB2P05120 415 aa15.76■□□□□ 0.11
LITAF-219ENST00000576334 IL6STP40189 918 aaPredicted RBP15.76■□□□□ 0.11
LITAF-219ENST00000576334 KDM3BQ7LBC6 1761 aa15.75■□□□□ 0.11
LITAF-219ENST00000576334 MYBBP1AQ9BQG0 1328 aaKnown RBP15.75■□□□□ 0.11
LITAF-219ENST00000576334 NBPF26B4DH59 902 aa15.75■□□□□ 0.11
LITAF-219ENST00000576334 CAMTA2O94983 1202 aa15.75■□□□□ 0.11
LITAF-219ENST00000576334 NEFMP07197 916 aa15.75■□□□□ 0.11
LITAF-219ENST00000576334 SNRPA1P09661 255 aaKnown RBP15.75■□□□□ 0.11
LITAF-219ENST00000576334 NBPF10Q6P3W6 841 aaKnown RBP15.75■□□□□ 0.11
LITAF-219ENST00000576334 NBPF15Q8N660 670 aa15.75■□□□□ 0.11
LITAF-219ENST00000576334 RRP7AQ9Y3A4 280 aaKnown RBP15.75■□□□□ 0.11
LITAF-219ENST00000576334 ADCY9O60503 1353 aa15.75■□□□□ 0.11
LITAF-219ENST00000576334 MAPK8IP3Q9UPT6 1336 aa15.74■□□□□ 0.11
LITAF-219ENST00000576334 ARHGAP27Q6ZUM4 889 aa15.74■□□□□ 0.11
LITAF-219ENST00000576334 BCORQ6W2J9 1755 aa15.74■□□□□ 0.11
LITAF-219ENST00000576334 A0A087WZG4 1122 aa15.73■□□□□ 0.11
LITAF-219ENST00000576334 DZIP3Q86Y13 1208 aaKnown RBP15.73■□□□□ 0.11
LITAF-219ENST00000576334 PIM2Q9P1W9 311 aa15.73■□□□□ 0.11
LITAF-219ENST00000576334 ANKRD31Q8N7Z5 1873 aa15.73■□□□□ 0.11
LITAF-219ENST00000576334 ARFGEF1Q9Y6D6 1849 aa15.73■□□□□ 0.11
LITAF-219ENST00000576334 RIPK4P57078 832 aa15.72■□□□□ 0.11
LITAF-219ENST00000576334 EIF4A1P60842 406 aaKnown RBP15.72■□□□□ 0.11
LITAF-219ENST00000576334 NEUROD2Q15784 382 aa15.72■□□□□ 0.11
LITAF-219ENST00000576334 TMPOP42166 694 aaKnown RBP15.71■□□□□ 0.11
LITAF-219ENST00000576334 DALRD3Q5D0E6 543 aaKnown RBP15.71■□□□□ 0.11
LITAF-219ENST00000576334 NGEFQ8N5V2 710 aa15.71■□□□□ 0.11
LITAF-219ENST00000576334 PRKRIP1Q9H875 184 aaPredicted RBP15.71■□□□□ 0.11
LITAF-219ENST00000576334 LAMB4A4D0S4 1761 aa15.71■□□□□ 0.11
LITAF-219ENST00000576334 GIGYF1O75420 1035 aaPredicted RBP15.7■□□□□ 0.1
LITAF-219ENST00000576334 PRR5LQ6MZQ0 368 aa15.7■□□□□ 0.1
LITAF-219ENST00000576334 ADAMTS8Q9UP79 889 aa15.7■□□□□ 0.1
LITAF-219ENST00000576334 DLEC1Q9Y238 1755 aa15.7■□□□□ 0.1
LITAF-219ENST00000576334 COL11A2P13942 1736 aaPredicted RBP15.69■□□□□ 0.1
LITAF-219ENST00000576334 C1QTNF8P60827 252 aa15.69■□□□□ 0.1
LITAF-219ENST00000576334 HLFQ16534 295 aa15.69■□□□□ 0.1
LITAF-219ENST00000576334 NPM2Q86SE8 214 aaKnown RBP15.69■□□□□ 0.1
LITAF-219ENST00000576334 C2CD5Q86YS7 1000 aa15.69■□□□□ 0.1
LITAF-219ENST00000576334 PNNQ9H307 717 aaKnown RBP15.69■□□□□ 0.1
LITAF-219ENST00000576334 SETDB2Q96T68 719 aa15.68■□□□□ 0.1
LITAF-219ENST00000576334 TSPYL4Q9UJ04 414 aa15.68■□□□□ 0.1
LITAF-219ENST00000576334 FAM177BA6PVY3 158 aa15.67■□□□□ 0.1
LITAF-219ENST00000576334 MYL6BP14649 208 aa15.67■□□□□ 0.1
LITAF-219ENST00000576334 RASSF7Q02833 373 aa15.67■□□□□ 0.1
LITAF-219ENST00000576334 CCDC184Q52MB2 194 aa15.67■□□□□ 0.1
LITAF-219ENST00000576334 PNISRQ8TF01 805 aaKnown RBP15.67■□□□□ 0.1
LITAF-219ENST00000576334 GPBP1L1Q9HC44 474 aaPredicted RBP15.67■□□□□ 0.1
LITAF-219ENST00000576334 ZNF219Q9P2Y4 722 aaPredicted RBP15.67■□□□□ 0.1
LITAF-219ENST00000576334 SBF1O95248 1867 aa15.66■□□□□ 0.1
LITAF-219ENST00000576334 SENP3-EIF4A1A0A087X0R7 540 aa15.66■□□□□ 0.1
LITAF-219ENST00000576334 PRELPP51888 382 aa15.66■□□□□ 0.1
LITAF-219ENST00000576334 WDR43Q15061 677 aaKnown RBP eCLIP15.66■□□□□ 0.1
LITAF-219ENST00000576334 KRT24Q2M2I5 525 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 167.9 ms