RNA–Protein interactions for RNA: ENST00000575934.5

ABR-233, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 689 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-233ENST00000575934 C1QTNF8P60827 252 aa27.38■■□□□ 1.97
ABR-233ENST00000575934 NRXN2Q9P2S2 1712 aa27.38■■□□□ 1.97
ABR-233ENST00000575934 ZPR1O75312 459 aa27.37■■□□□ 1.97
ABR-233ENST00000575934 GIGYF1O75420 1035 aaPredicted RBP27.37■■□□□ 1.97
ABR-233ENST00000575934 USPL1Q5W0Q7 1092 aa27.37■■□□□ 1.97
ABR-233ENST00000575934 DPEP1P16444 411 aa27.36■■□□□ 1.97
ABR-233ENST00000575934 TM4SF1P30408 202 aa27.36■■□□□ 1.97
ABR-233ENST00000575934 ZNF790Q6PG37 636 aa27.36■■□□□ 1.97
ABR-233ENST00000575934 ZNF496Q96IT1 587 aaPredicted RBP27.36■■□□□ 1.97
ABR-233ENST00000575934 NARFQ9UHQ1 456 aa27.36■■□□□ 1.97
ABR-233ENST00000575934 HEG1Q9ULI3 1381 aa27.35■■□□□ 1.97
ABR-233ENST00000575934 POLRMTO00411 1230 aaKnown RBP27.35■■□□□ 1.97
ABR-233ENST00000575934 U2AF1L5P0DN76 240 aaPredicted RBP27.34■■□□□ 1.97
ABR-233ENST00000575934 U2AF1Q01081 240 aaKnown RBP eCLIP27.34■■□□□ 1.97
ABR-233ENST00000575934 BCS1LQ9Y276 419 aa27.34■■□□□ 1.97
ABR-233ENST00000575934 STARD3NLO95772 234 aa27.33■■□□□ 1.97
ABR-233ENST00000575934 KCNA3P22001 575 aa27.33■■□□□ 1.97
ABR-233ENST00000575934 SCN7AQ01118 1682 aa27.33■■□□□ 1.97
ABR-233ENST00000575934 DLG5Q8TDM6 1919 aa27.32■■□□□ 1.96
ABR-233ENST00000575934 FCHSD2O94868 740 aa27.32■■□□□ 1.96
ABR-233ENST00000575934 DLEC1Q9Y238 1755 aa27.3■■□□□ 1.96
ABR-233ENST00000575934 CANXP27824 592 aaKnown RBP27.3■■□□□ 1.96
ABR-233ENST00000575934 EIF5P55010 431 aaKnown RBP27.3■■□□□ 1.96
ABR-233ENST00000575934 TEX13AQ9BXU3 409 aaPredicted RBP27.3■■□□□ 1.96
ABR-233ENST00000575934 BCL2L12Q9HB09 334 aa27.3■■□□□ 1.96
ABR-233ENST00000575934 NFIXQ14938 502 aa27.29■■□□□ 1.96
ABR-233ENST00000575934 FMNL2Q96PY5 1086 aa27.29■■□□□ 1.96
ABR-233ENST00000575934 GPBP1L1Q9HC44 474 aaPredicted RBP27.27■■□□□ 1.96
ABR-233ENST00000575934 PIM2Q9P1W9 311 aa27.27■■□□□ 1.96
ABR-233ENST00000575934 BTBD11A6QL63 1104 aa27.26■■□□□ 1.95
ABR-233ENST00000575934 KCNQ3O43525 872 aa27.26■■□□□ 1.95
ABR-233ENST00000575934 BCORQ6W2J9 1755 aa27.25■■□□□ 1.95
ABR-233ENST00000575934 A0A087WZG4 1122 aa27.25■■□□□ 1.95
ABR-233ENST00000575934 SBF1O95248 1867 aa27.24■■□□□ 1.95
ABR-233ENST00000575934 SENP3-EIF4A1A0A087X0R7 540 aa27.23■■□□□ 1.95
ABR-233ENST00000575934 CHRNA5P30532 468 aa27.23■■□□□ 1.95
ABR-233ENST00000575934 IL6STP40189 918 aaPredicted RBP27.23■■□□□ 1.95
ABR-233ENST00000575934 MCM10Q7L590 875 aa27.23■■□□□ 1.95
ABR-233ENST00000575934 RTF1Q92541 710 aaKnown RBP27.23■■□□□ 1.95
ABR-233ENST00000575934 ANKRD31Q8N7Z5 1873 aa27.23■■□□□ 1.95
ABR-233ENST00000575934 HTATSF1O43719 755 aaKnown RBP27.22■■□□□ 1.95
ABR-233ENST00000575934 ARHGAP27Q6ZUM4 889 aa27.22■■□□□ 1.95
ABR-233ENST00000575934 ZNF526Q8TF50 670 aaPredicted RBP27.22■■□□□ 1.95
ABR-233ENST00000575934 SERPINB2P05120 415 aa27.21■■□□□ 1.95
ABR-233ENST00000575934 DALRD3Q5D0E6 543 aaKnown RBP27.21■■□□□ 1.95
ABR-233ENST00000575934 A1BGP04217 495 aa27.2■■□□□ 1.94
ABR-233ENST00000575934 DCTN1Q14203 1278 aa27.19■■□□□ 1.94
ABR-233ENST00000575934 LAMB4A4D0S4 1761 aa27.19■■□□□ 1.94
ABR-233ENST00000575934 KDM3BQ7LBC6 1761 aa27.19■■□□□ 1.94
ABR-233ENST00000575934 CARMIL3Q8ND23 1372 aa27.18■■□□□ 1.94
ABR-233ENST00000575934 TBC1D2BQ9UPU7 963 aa27.17■■□□□ 1.94
ABR-233ENST00000575934 ZNF330Q9Y3S2 320 aaPredicted RBP27.17■■□□□ 1.94
ABR-233ENST00000575934 TBC1D9BQ66K14 1250 aa27.16■■□□□ 1.94
ABR-233ENST00000575934 BICDL1Q6ZP65 573 aa27.16■■□□□ 1.94
ABR-233ENST00000575934 USP16Q9Y5T5 823 aa27.16■■□□□ 1.94
ABR-233ENST00000575934 PRAMEF22A3QJZ6 481 aa27.15■■□□□ 1.94
ABR-233ENST00000575934 SNRPA1P09661 255 aaKnown RBP27.15■■□□□ 1.94
ABR-233ENST00000575934 PLEKHF1Q96S99 279 aa27.15■■□□□ 1.94
ABR-233ENST00000575934 COL11A2P13942 1736 aaPredicted RBP27.14■■□□□ 1.94
ABR-233ENST00000575934 CAMTA2O94983 1202 aa27.14■■□□□ 1.94
ABR-233ENST00000575934 CCDC88AQ3V6T2 1871 aa27.13■■□□□ 1.93
ABR-233ENST00000575934 KIF3CO14782 793 aa27.13■■□□□ 1.93
ABR-233ENST00000575934 NEFMP07197 916 aa27.13■■□□□ 1.93
ABR-233ENST00000575934 NPM2Q86SE8 214 aaKnown RBP27.13■■□□□ 1.93
ABR-233ENST00000575934 TAF7Q15545 349 aaPredicted RBP27.12■■□□□ 1.93
ABR-233ENST00000575934 C9orf131Q5VYM1 1079 aa27.12■■□□□ 1.93
ABR-233ENST00000575934 PIP4K2AP48426 406 aaPredicted RBP27.1■■□□□ 1.93
ABR-233ENST00000575934 DZIP3Q86Y13 1208 aaKnown RBP27.1■■□□□ 1.93
ABR-233ENST00000575934 PRR5LQ6MZQ0 368 aa27.09■■□□□ 1.93
ABR-233ENST00000575934 C2CD5Q86YS7 1000 aa27.09■■□□□ 1.93
ABR-233ENST00000575934 CACNA1SQ13698 1873 aa27.08■■□□□ 1.93
ABR-233ENST00000575934 RALBP1Q15311 655 aa27.08■■□□□ 1.93
ABR-233ENST00000575934 NFE2L2Q16236 605 aa27.08■■□□□ 1.93
ABR-233ENST00000575934 TTLL6Q8N841 843 aa27.08■■□□□ 1.93
ABR-233ENST00000575934 H0YIN7 160 aa27.07■■□□□ 1.92
ABR-233ENST00000575934 BRIP1Q9BX63 1249 aa27.07■■□□□ 1.92
ABR-233ENST00000575934 ARFGEF2Q9Y6D5 1785 aa27.07■■□□□ 1.92
ABR-233ENST00000575934 NBPF26B4DH59 902 aa27.06■■□□□ 1.92
ABR-233ENST00000575934 NBPF10Q6P3W6 841 aaKnown RBP27.06■■□□□ 1.92
ABR-233ENST00000575934 NBPF15Q8N660 670 aa27.06■■□□□ 1.92
ABR-233ENST00000575934 SETDB2Q96T68 719 aa27.06■■□□□ 1.92
ABR-233ENST00000575934 PNNQ9H307 717 aaKnown RBP27.06■■□□□ 1.92
ABR-233ENST00000575934 MIS18AQ9NYP9 233 aa27.06■■□□□ 1.92
ABR-233ENST00000575934 RNF181Q9P0P0 153 aa27.06■■□□□ 1.92
ABR-233ENST00000575934 PDZRN3Q9UPQ7 1066 aa27.06■■□□□ 1.92
ABR-233ENST00000575934 FER1L6Q2WGJ9 1857 aa27.05■■□□□ 1.92
ABR-233ENST00000575934 PNISRQ8TF01 805 aaKnown RBP27.05■■□□□ 1.92
ABR-233ENST00000575934 PDE6BP35913 854 aa27.04■■□□□ 1.92
ABR-233ENST00000575934 CLEC4GQ6UXB4 293 aa27.04■■□□□ 1.92
ABR-233ENST00000575934 MAPK8IP3Q9UPT6 1336 aa27.04■■□□□ 1.92
ABR-233ENST00000575934 TNRC6CQ9HCJ0 1690 aaKnown RBP27.04■■□□□ 1.92
ABR-233ENST00000575934 TIAM2Q8IVF5 1701 aa27.03■■□□□ 1.92
ABR-233ENST00000575934 CNBD1Q8NA66 436 aa27.03■■□□□ 1.92
ABR-233ENST00000575934 DICER1Q9UPY3 1922 aaKnown RBP27.03■■□□□ 1.92
ABR-233ENST00000575934 NUP98P52948 1817 aa27.02■■□□□ 1.92
ABR-233ENST00000575934 RGL2O15211 777 aa27.02■■□□□ 1.92
ABR-233ENST00000575934 RASSF7Q02833 373 aa27.02■■□□□ 1.92
ABR-233ENST00000575934 CCDC24Q8N4L8 307 aa27.02■■□□□ 1.92
ABR-233ENST00000575934 THUMPD2Q9BTF0 503 aaKnown RBP27.02■■□□□ 1.92
ABR-233ENST00000575934 NMRK2Q9NPI5 230 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms