RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 FKBP8Q14318 412 aa12.86□□□□□ -0.35
NPLOC4-212ENST00000573328 USPL1Q5W0Q7 1092 aa12.86□□□□□ -0.35
NPLOC4-212ENST00000573328 ZNF790Q6PG37 636 aa12.86□□□□□ -0.35
NPLOC4-212ENST00000573328 VSIG10Q8N0Z9 540 aa12.86□□□□□ -0.35
NPLOC4-212ENST00000573328 ZNF330Q9Y3S2 320 aaPredicted RBP12.86□□□□□ -0.35
NPLOC4-212ENST00000573328 HEG1Q9ULI3 1381 aa12.85□□□□□ -0.35
NPLOC4-212ENST00000573328 LAMB4A4D0S4 1761 aa12.85□□□□□ -0.35
NPLOC4-212ENST00000573328 BTBD11A6QL63 1104 aa12.85□□□□□ -0.35
NPLOC4-212ENST00000573328 FCHSD2O94868 740 aa12.85□□□□□ -0.35
NPLOC4-212ENST00000573328 STARD3NLO95772 234 aa12.85□□□□□ -0.35
NPLOC4-212ENST00000573328 BCORQ6W2J9 1755 aa12.84□□□□□ -0.35
NPLOC4-212ENST00000573328 CEMIPQ8WUJ3 1361 aa12.84□□□□□ -0.35
NPLOC4-212ENST00000573328 A0A0G2JLW4 131 aa12.84□□□□□ -0.35
NPLOC4-212ENST00000573328 TGFB2P61812 414 aa12.84□□□□□ -0.35
NPLOC4-212ENST00000573328 NPM2Q86SE8 214 aaKnown RBP12.84□□□□□ -0.35
NPLOC4-212ENST00000573328 ZNF496Q96IT1 587 aaPredicted RBP12.84□□□□□ -0.35
NPLOC4-212ENST00000573328 FMNL2Q96PY5 1086 aa12.84□□□□□ -0.35
NPLOC4-212ENST00000573328 BCS1LQ9Y276 419 aa12.84□□□□□ -0.35
NPLOC4-212ENST00000573328 NRXN2Q9P2S2 1712 aa12.84□□□□□ -0.35
NPLOC4-212ENST00000573328 DLEC1Q9Y238 1755 aa12.84□□□□□ -0.35
NPLOC4-212ENST00000573328 CACNA1SQ13698 1873 aa12.83□□□□□ -0.36
NPLOC4-212ENST00000573328 ATP10DQ9P241 1426 aa12.83□□□□□ -0.36
NPLOC4-212ENST00000573328 GIGYF1O75420 1035 aaPredicted RBP12.83□□□□□ -0.36
NPLOC4-212ENST00000573328 DDR1Q08345 913 aa12.83□□□□□ -0.36
NPLOC4-212ENST00000573328 MCM10Q7L590 875 aa12.83□□□□□ -0.36
NPLOC4-212ENST00000573328 TEX13AQ9BXU3 409 aaPredicted RBP12.83□□□□□ -0.36
NPLOC4-212ENST00000573328 NARFQ9UHQ1 456 aa12.83□□□□□ -0.36
NPLOC4-212ENST00000573328 KDM3BQ7LBC6 1761 aa12.82□□□□□ -0.36
NPLOC4-212ENST00000573328 DPEP1P16444 411 aa12.82□□□□□ -0.36
NPLOC4-212ENST00000573328 A0A087WZG4 1122 aa12.81□□□□□ -0.36
NPLOC4-212ENST00000573328 POLRMTO00411 1230 aaKnown RBP12.81□□□□□ -0.36
NPLOC4-212ENST00000573328 DCTN1Q14203 1278 aa12.81□□□□□ -0.36
NPLOC4-212ENST00000573328 MAPK8IP3Q9UPT6 1336 aa12.81□□□□□ -0.36
NPLOC4-212ENST00000573328 KCNQ3O43525 872 aa12.8□□□□□ -0.36
NPLOC4-212ENST00000573328 BICDL1Q6ZP65 573 aa12.8□□□□□ -0.36
NPLOC4-212ENST00000573328 ZNF526Q8TF50 670 aaPredicted RBP12.8□□□□□ -0.36
NPLOC4-212ENST00000573328 CCDC88AQ3V6T2 1871 aa12.8□□□□□ -0.36
NPLOC4-212ENST00000573328 ANKRD31Q8N7Z5 1873 aa12.8□□□□□ -0.36
NPLOC4-212ENST00000573328 DDX10Q13206 875 aaKnown RBP12.79□□□□□ -0.36
NPLOC4-212ENST00000573328 NFIXQ14938 502 aa12.79□□□□□ -0.36
NPLOC4-212ENST00000573328 PNNQ9H307 717 aaKnown RBP12.79□□□□□ -0.36
NPLOC4-212ENST00000573328 GPBP1L1Q9HC44 474 aaPredicted RBP12.79□□□□□ -0.36
NPLOC4-212ENST00000573328 SBF1O95248 1867 aa12.78□□□□□ -0.36
NPLOC4-212ENST00000573328 HTATSF1O43719 755 aaKnown RBP12.78□□□□□ -0.36
NPLOC4-212ENST00000573328 A1BGP04217 495 aa12.78□□□□□ -0.36
NPLOC4-212ENST00000573328 TM4SF1P30408 202 aa12.78□□□□□ -0.36
NPLOC4-212ENST00000573328 CHRNA5P30532 468 aa12.78□□□□□ -0.36
NPLOC4-212ENST00000573328 IL6STP40189 918 aaPredicted RBP12.78□□□□□ -0.36
NPLOC4-212ENST00000573328 EIF5P55010 431 aaKnown RBP12.78□□□□□ -0.36
NPLOC4-212ENST00000573328 RALBP1Q15311 655 aa12.78□□□□□ -0.36
NPLOC4-212ENST00000573328 ARHGAP27Q6ZUM4 889 aa12.78□□□□□ -0.36
NPLOC4-212ENST00000573328 PIM2Q9P1W9 311 aa12.78□□□□□ -0.36
NPLOC4-212ENST00000573328 TBC1D2BQ9UPU7 963 aa12.78□□□□□ -0.36
NPLOC4-212ENST00000573328 ADCY9O60503 1353 aa12.78□□□□□ -0.36
NPLOC4-212ENST00000573328 COL11A2P13942 1736 aaPredicted RBP12.77□□□□□ -0.36
NPLOC4-212ENST00000573328 NPHP1O15259 732 aa12.77□□□□□ -0.37
NPLOC4-212ENST00000573328 SERPINB2P05120 415 aa12.77□□□□□ -0.37
NPLOC4-212ENST00000573328 C1QTNF8P60827 252 aa12.77□□□□□ -0.37
NPLOC4-212ENST00000573328 DALRD3Q5D0E6 543 aaKnown RBP12.77□□□□□ -0.37
NPLOC4-212ENST00000573328 BCL2L12Q9HB09 334 aa12.77□□□□□ -0.37
NPLOC4-212ENST00000573328 SENP3-EIF4A1A0A087X0R7 540 aa12.76□□□□□ -0.37
NPLOC4-212ENST00000573328 PRAMEF22A3QJZ6 481 aa12.76□□□□□ -0.37
NPLOC4-212ENST00000573328 SNRPA1P09661 255 aaKnown RBP12.76□□□□□ -0.37
NPLOC4-212ENST00000573328 PIP4K2AP48426 406 aaPredicted RBP12.76□□□□□ -0.37
NPLOC4-212ENST00000573328 TAF7Q15545 349 aaPredicted RBP12.76□□□□□ -0.37
NPLOC4-212ENST00000573328 NFE2L2Q16236 605 aa12.76□□□□□ -0.37
NPLOC4-212ENST00000573328 CARMIL3Q8ND23 1372 aa12.76□□□□□ -0.37
NPLOC4-212ENST00000573328 KCNA3P22001 575 aa12.75□□□□□ -0.37
NPLOC4-212ENST00000573328 NUP98P52948 1817 aa12.75□□□□□ -0.37
NPLOC4-212ENST00000573328 TBC1D9BQ66K14 1250 aa12.75□□□□□ -0.37
NPLOC4-212ENST00000573328 DZIP3Q86Y13 1208 aaKnown RBP12.75□□□□□ -0.37
NPLOC4-212ENST00000573328 MYBBP1AQ9BQG0 1328 aaKnown RBP12.75□□□□□ -0.37
NPLOC4-212ENST00000573328 MIS18AQ9NYP9 233 aa12.75□□□□□ -0.37
NPLOC4-212ENST00000573328 USP16Q9Y5T5 823 aa12.75□□□□□ -0.37
NPLOC4-212ENST00000573328 TIAM2Q8IVF5 1701 aa12.74□□□□□ -0.37
NPLOC4-212ENST00000573328 PNISRQ8TF01 805 aaKnown RBP12.74□□□□□ -0.37
NPLOC4-212ENST00000573328 PLEKHF1Q96S99 279 aa12.74□□□□□ -0.37
NPLOC4-212ENST00000573328 ARFGEF2Q9Y6D5 1785 aa12.74□□□□□ -0.37
NPLOC4-212ENST00000573328 C2CD5Q86YS7 1000 aa12.73□□□□□ -0.37
NPLOC4-212ENST00000573328 SETDB2Q96T68 719 aa12.73□□□□□ -0.37
NPLOC4-212ENST00000573328 THUMPD2Q9BTF0 503 aaKnown RBP12.73□□□□□ -0.37
NPLOC4-212ENST00000573328 H0YIN7 160 aa12.72□□□□□ -0.37
NPLOC4-212ENST00000573328 CAMTA2O94983 1202 aa12.72□□□□□ -0.37
NPLOC4-212ENST00000573328 WDR43Q15061 677 aaKnown RBP eCLIP12.72□□□□□ -0.37
NPLOC4-212ENST00000573328 CCDC24Q8N4L8 307 aa12.72□□□□□ -0.37
NPLOC4-212ENST00000573328 CNBD1Q8NA66 436 aa12.72□□□□□ -0.37
NPLOC4-212ENST00000573328 ZNF652Q9Y2D9 606 aa12.72□□□□□ -0.37
NPLOC4-212ENST00000573328 TNRC6CQ9HCJ0 1690 aaKnown RBP12.71□□□□□ -0.37
NPLOC4-212ENST00000573328 DICER1Q9UPY3 1922 aaKnown RBP12.71□□□□□ -0.37
NPLOC4-212ENST00000573328 ST5P78524 1137 aa12.71□□□□□ -0.37
NPLOC4-212ENST00000573328 C9orf131Q5VYM1 1079 aa12.71□□□□□ -0.37
NPLOC4-212ENST00000573328 PRR5LQ6MZQ0 368 aa12.71□□□□□ -0.37
NPLOC4-212ENST00000573328 PDE6BP35913 854 aa12.7□□□□□ -0.38
NPLOC4-212ENST00000573328 RIPK4P57078 832 aa12.7□□□□□ -0.38
NPLOC4-212ENST00000573328 LMOD3Q0VAK6 560 aa12.7□□□□□ -0.38
NPLOC4-212ENST00000573328 CCDC146Q8IYE0 955 aa12.7□□□□□ -0.38
NPLOC4-212ENST00000573328 TTLL6Q8N841 843 aa12.7□□□□□ -0.38
NPLOC4-212ENST00000573328 ZNF622Q969S3 477 aaKnown RBP eCLIP12.7□□□□□ -0.385e-11■□□□□ 9.4
NPLOC4-212ENST00000573328 RNF181Q9P0P0 153 aa12.7□□□□□ -0.38
NPLOC4-212ENST00000573328 FER1L6Q2WGJ9 1857 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms