RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 TEFQ10587 303 aa12.09□□□□□ -0.47
NDE1-207ENST00000573203 SLC39A6Q13433 755 aa12.09□□□□□ -0.47
NDE1-207ENST00000573203 RALBP1Q15311 655 aa12.09□□□□□ -0.47
NDE1-207ENST00000573203 RC3H1Q5TC82 1133 aaKnown RBP12.09□□□□□ -0.47
NDE1-207ENST00000573203 PHACTR3Q96KR7 559 aa12.09□□□□□ -0.47
NDE1-207ENST00000573203 CNTNAP4Q9C0A0 1308 aa12.09□□□□□ -0.47
NDE1-207ENST00000573203 TJP1Q07157 1748 aa12.08□□□□□ -0.47
NDE1-207ENST00000573203 EVX2Q03828 476 aa12.08□□□□□ -0.48
NDE1-207ENST00000573203 MYH14Q7Z406 1995 aaKnown RBP12.08□□□□□ -0.48
NDE1-207ENST00000573203 CICQ96RK0 1608 aaPredicted RBP12.08□□□□□ -0.48
NDE1-207ENST00000573203 NEFMP07197 916 aa12.07□□□□□ -0.48
NDE1-207ENST00000573203 CD44P16070 742 aaKnown RBP12.07□□□□□ -0.48
NDE1-207ENST00000573203 TRAPPC3LQ5T215 181 aa12.07□□□□□ -0.48
NDE1-207ENST00000573203 IL17REQ8NFR9 667 aa12.07□□□□□ -0.48
NDE1-207ENST00000573203 SIPA1L3O60292 1781 aaPredicted RBP12.07□□□□□ -0.48
NDE1-207ENST00000573203 UBR2Q8IWV8 1755 aa12.06□□□□□ -0.48
NDE1-207ENST00000573203 RPS6KA4O75676 772 aa12.06□□□□□ -0.48
NDE1-207ENST00000573203 CRKLP46109 303 aaKnown RBP12.06□□□□□ -0.48
NDE1-207ENST00000573203 TTC5Q8N0Z6 440 aa12.06□□□□□ -0.48
NDE1-207ENST00000573203 PLCD3Q8N3E9 789 aa12.06□□□□□ -0.48
NDE1-207ENST00000573203 RTF1Q92541 710 aaKnown RBP12.06□□□□□ -0.48
NDE1-207ENST00000573203 ZBTB47Q9UFB7 747 aaPredicted RBP12.06□□□□□ -0.48
NDE1-207ENST00000573203 KCPQ6ZWJ8 1503 aa12.06□□□□□ -0.48
NDE1-207ENST00000573203 RFC4P35249 363 aa12.05□□□□□ -0.48
NDE1-207ENST00000573203 DNAJC10Q8IXB1 793 aa12.05□□□□□ -0.48
NDE1-207ENST00000573203 ARHGEF1Q92888 912 aaKnown RBP12.05□□□□□ -0.48
NDE1-207ENST00000573203 C4AP0C0L4 1744 aa12.04□□□□□ -0.48
NDE1-207ENST00000573203 CLCN6P51797 869 aa12.04□□□□□ -0.48
NDE1-207ENST00000573203 PNNQ9H307 717 aaKnown RBP12.04□□□□□ -0.48
NDE1-207ENST00000573203 MYBBP1AQ9BQG0 1328 aaKnown RBP12.04□□□□□ -0.48
NDE1-207ENST00000573203 CEMIPQ8WUJ3 1361 aa12.04□□□□□ -0.48
NDE1-207ENST00000573203 DLG5Q8TDM6 1919 aa12.03□□□□□ -0.48
NDE1-207ENST00000573203 ZNF790Q6PG37 636 aa12.03□□□□□ -0.48
NDE1-207ENST00000573203 MCM10Q7L590 875 aa12.03□□□□□ -0.48
NDE1-207ENST00000573203 VSIG10Q8N0Z9 540 aa12.03□□□□□ -0.48
NDE1-207ENST00000573203 CCDC87Q9NVE4 849 aa12.03□□□□□ -0.48
NDE1-207ENST00000573203 BTBD11A6QL63 1104 aa12.02□□□□□ -0.49
NDE1-207ENST00000573203 HTATSF1O43719 755 aaKnown RBP12.02□□□□□ -0.49
NDE1-207ENST00000573203 CYP19A1P11511 503 aaPredicted RBP12.02□□□□□ -0.49
NDE1-207ENST00000573203 DCTN1Q14203 1278 aa12.02□□□□□ -0.49
NDE1-207ENST00000573203 INTS5Q6P9B9 1019 aaKnown RBP12.02□□□□□ -0.49
NDE1-207ENST00000573203 NLGN1Q8N2Q7 840 aa12.02□□□□□ -0.49
NDE1-207ENST00000573203 NLGN2Q8NFZ4 835 aa12.02□□□□□ -0.49
NDE1-207ENST00000573203 ZNF496Q96IT1 587 aaPredicted RBP12.02□□□□□ -0.49
NDE1-207ENST00000573203 MAPK8IP3Q9UPT6 1336 aa12.02□□□□□ -0.49
NDE1-207ENST00000573203 STARD3NLO95772 234 aa12.01□□□□□ -0.49
NDE1-207ENST00000573203 MMP10P09238 476 aa12.01□□□□□ -0.49
NDE1-207ENST00000573203 GPR162Q16538 588 aa12.01□□□□□ -0.49
NDE1-207ENST00000573203 PELP1Q8IZL8 1130 aaKnown RBP12.01□□□□□ -0.49
NDE1-207ENST00000573203 FMNL2Q96PY5 1086 aa12.01□□□□□ -0.49
NDE1-207ENST00000573203 PLEKHF1Q96S99 279 aa12.01□□□□□ -0.49
NDE1-207ENST00000573203 CD2APQ9Y5K6 639 aa12.01□□□□□ -0.49
NDE1-207ENST00000573203 HEG1Q9ULI3 1381 aa12.01□□□□□ -0.49
NDE1-207ENST00000573203 GYS1P13807 737 aa12□□□□□ -0.49
NDE1-207ENST00000573203 YY1P25490 414 aa12□□□□□ -0.49
NDE1-207ENST00000573203 NFE2L2Q16236 605 aa12□□□□□ -0.49
NDE1-207ENST00000573203 TEX13AQ9BXU3 409 aaPredicted RBP12□□□□□ -0.49
NDE1-207ENST00000573203 SRP68Q9UHB9 627 aaKnown RBP12□□□□□ -0.49
NDE1-207ENST00000573203 ZBTB1Q9Y2K1 713 aa12□□□□□ -0.49
NDE1-207ENST00000573203 SOS1Q07889 1333 aaPredicted RBP12□□□□□ -0.49
NDE1-207ENST00000573203 KCNQ3O43525 872 aa11.99□□□□□ -0.49
NDE1-207ENST00000573203 ZPR1O75312 459 aa11.99□□□□□ -0.49
NDE1-207ENST00000573203 CANXP27824 592 aaKnown RBP11.99□□□□□ -0.49
NDE1-207ENST00000573203 USP42Q9H9J4 1324 aaKnown RBP11.99□□□□□ -0.49
NDE1-207ENST00000573203 CHD4Q14839 1912 aa11.99□□□□□ -0.49
NDE1-207ENST00000573203 COL15A1P39059 1388 aa11.98□□□□□ -0.49
NDE1-207ENST00000573203 TAF7Q15545 349 aaPredicted RBP11.98□□□□□ -0.49
NDE1-207ENST00000573203 PRKRIP1Q9H875 184 aaPredicted RBP11.98□□□□□ -0.49
NDE1-207ENST00000573203 PARP3Q9Y6F1 533 aa11.98□□□□□ -0.49
NDE1-207ENST00000573203 VASPP50552 380 aaPredicted RBP11.97□□□□□ -0.49
NDE1-207ENST00000573203 WDR43Q15061 677 aaKnown RBP eCLIP11.97□□□□□ -0.49
NDE1-207ENST00000573203 USPL1Q5W0Q7 1092 aa11.97□□□□□ -0.49
NDE1-207ENST00000573203 KIF13BQ9NQT8 1826 aa11.96□□□□□ -0.49
NDE1-207ENST00000573203 NPM2Q86SE8 214 aaKnown RBP11.96□□□□□ -0.49
NDE1-207ENST00000573203 ZNF579Q8NAF0 562 aaKnown RBP11.96□□□□□ -0.49
NDE1-207ENST00000573203 NARFQ9UHQ1 456 aa11.96□□□□□ -0.49
NDE1-207ENST00000573203 ZNF330Q9Y3S2 320 aaPredicted RBP11.96□□□□□ -0.49
NDE1-207ENST00000573203 A0A087WZG4 1122 aa11.95□□□□□ -0.5
NDE1-207ENST00000573203 SNRPA1P09661 255 aaKnown RBP11.95□□□□□ -0.5
NDE1-207ENST00000573203 RIPK4P57078 832 aa11.95□□□□□ -0.5
NDE1-207ENST00000573203 PNISRQ8TF01 805 aaKnown RBP11.95□□□□□ -0.5
NDE1-207ENST00000573203 THUMPD2Q9BTF0 503 aaKnown RBP11.95□□□□□ -0.5
NDE1-207ENST00000573203 MIS18AQ9NYP9 233 aa11.95□□□□□ -0.5
NDE1-207ENST00000573203 N4BP2Q86UW6 1770 aaPredicted RBP11.95□□□□□ -0.5
NDE1-207ENST00000573203 C10orf71Q711Q0 1435 aa11.94□□□□□ -0.5
NDE1-207ENST00000573203 GOLGB1Q14789 3259 aaKnown RBP11.94□□□□□ -0.5
NDE1-207ENST00000573203 GRIN3BO60391 1043 aa11.94□□□□□ -0.5
NDE1-207ENST00000573203 A1BGP04217 495 aa11.94□□□□□ -0.5
NDE1-207ENST00000573203 YBX3P16989 372 aaKnown RBP eCLIP11.94□□□□□ -0.5
NDE1-207ENST00000573203 EIF5P55010 431 aaKnown RBP11.94□□□□□ -0.5
NDE1-207ENST00000573203 CCDC146Q8IYE0 955 aa11.94□□□□□ -0.5
NDE1-207ENST00000573203 USP16Q9Y5T5 823 aa11.94□□□□□ -0.5
NDE1-207ENST00000573203 KDM3BQ7LBC6 1761 aa11.94□□□□□ -0.5
NDE1-207ENST00000573203 PRAMEF22A3QJZ6 481 aa11.93□□□□□ -0.5
NDE1-207ENST00000573203 TM4SF1P30408 202 aa11.93□□□□□ -0.5
NDE1-207ENST00000573203 IL6STP40189 918 aaPredicted RBP11.93□□□□□ -0.5
NDE1-207ENST00000573203 TMPOP42166 694 aaKnown RBP11.93□□□□□ -0.5
NDE1-207ENST00000573203 TGFB2P61812 414 aa11.93□□□□□ -0.5
NDE1-207ENST00000573203 DDR1Q08345 913 aa11.93□□□□□ -0.5
NDE1-207ENST00000573203 LMOD3Q0VAK6 560 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms