RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 ZBTB1Q9Y2K1 713 aa27.21■■□□□ 1.95
CHMP6-204ENST00000572778 PNISRQ8TF01 805 aaKnown RBP27.2■■□□□ 1.94
CHMP6-204ENST00000572778 UBR2Q8IWV8 1755 aa27.2■■□□□ 1.94
CHMP6-204ENST00000572778 CANXP27824 592 aaKnown RBP27.19■■□□□ 1.94
CHMP6-204ENST00000572778 MRS2Q9HD23 443 aa27.18■■□□□ 1.94
CHMP6-204ENST00000572778 SOS1Q07889 1333 aaPredicted RBP27.16■■□□□ 1.94
CHMP6-204ENST00000572778 DLG5Q8TDM6 1919 aa27.16■■□□□ 1.94
CHMP6-204ENST00000572778 SNRPA1P09661 255 aaKnown RBP27.16■■□□□ 1.94
CHMP6-204ENST00000572778 NLGN1Q8N2Q7 840 aa27.16■■□□□ 1.94
CHMP6-204ENST00000572778 SRP68Q9UHB9 627 aaKnown RBP27.16■■□□□ 1.94
CHMP6-204ENST00000572778 MYH14Q7Z406 1995 aaKnown RBP27.16■■□□□ 1.94
CHMP6-204ENST00000572778 GYS1P13807 737 aa27.15■■□□□ 1.94
CHMP6-204ENST00000572778 USP16Q9Y5T5 823 aa27.15■■□□□ 1.94
CHMP6-204ENST00000572778 COL24A1Q17RW2 1714 aa27.14■■□□□ 1.94
CHMP6-204ENST00000572778 PRAMEF22A3QJZ6 481 aa27.14■■□□□ 1.94
CHMP6-204ENST00000572778 A1BGP04217 495 aa27.14■■□□□ 1.94
CHMP6-204ENST00000572778 USP42Q9H9J4 1324 aaKnown RBP27.13■■□□□ 1.93
CHMP6-204ENST00000572778 COL15A1P39059 1388 aa27.12■■□□□ 1.93
CHMP6-204ENST00000572778 DCAF8L1A6NGE4 600 aa27.12■■□□□ 1.93
CHMP6-204ENST00000572778 APAF1O14727 1248 aa27.12■■□□□ 1.93
CHMP6-204ENST00000572778 ZPR1O75312 459 aa27.12■■□□□ 1.93
CHMP6-204ENST00000572778 MMP10P09238 476 aa27.12■■□□□ 1.93
CHMP6-204ENST00000572778 TSPYL4Q9UJ04 414 aa27.12■■□□□ 1.93
CHMP6-204ENST00000572778 TRIM35Q9UPQ4 493 aa27.12■■□□□ 1.93
CHMP6-204ENST00000572778 ZNF330Q9Y3S2 320 aaPredicted RBP27.12■■□□□ 1.93
CHMP6-204ENST00000572778 EIF4A1P60842 406 aaKnown RBP27.1■■□□□ 1.93
CHMP6-204ENST00000572778 EIF5P55010 431 aaKnown RBP27.09■■□□□ 1.93
CHMP6-204ENST00000572778 FKBP8Q14318 412 aa27.09■■□□□ 1.93
CHMP6-204ENST00000572778 USPL1Q5W0Q7 1092 aa27.09■■□□□ 1.93
CHMP6-204ENST00000572778 NPM2Q86SE8 214 aaKnown RBP27.09■■□□□ 1.93
CHMP6-204ENST00000572778 NARFQ9UHQ1 456 aa27.08■■□□□ 1.93
CHMP6-204ENST00000572778 LAS1LQ9Y4W2 734 aaKnown RBP27.08■■□□□ 1.93
CHMP6-204ENST00000572778 A0A087WZG4 1122 aa27.07■■□□□ 1.92
CHMP6-204ENST00000572778 IL6STP40189 918 aaPredicted RBP27.07■■□□□ 1.92
CHMP6-204ENST00000572778 PIP4K2AP48426 406 aaPredicted RBP27.07■■□□□ 1.92
CHMP6-204ENST00000572778 NLGN2Q8NFZ4 835 aa27.07■■□□□ 1.92
CHMP6-204ENST00000572778 BABAM1Q9NWV8 329 aa27.06■■□□□ 1.92
CHMP6-204ENST00000572778 CD2APQ9Y5K6 639 aa27.06■■□□□ 1.92
CHMP6-204ENST00000572778 PARP3Q9Y6F1 533 aa27.06■■□□□ 1.92
CHMP6-204ENST00000572778 C4AP0C0L4 1744 aa27.05■■□□□ 1.92
CHMP6-204ENST00000572778 GIGYF1O75420 1035 aaPredicted RBP27.05■■□□□ 1.92
CHMP6-204ENST00000572778 TBC1D2BQ9UPU7 963 aa27.03■■□□□ 1.92
CHMP6-204ENST00000572778 KDM3BQ7LBC6 1761 aa27.02■■□□□ 1.92
CHMP6-204ENST00000572778 SENP3-EIF4A1A0A087X0R7 540 aa27.01■■□□□ 1.91
CHMP6-204ENST00000572778 CHL1O00533 1208 aa27.01■■□□□ 1.91
CHMP6-204ENST00000572778 BCL2L12Q9HB09 334 aa27.01■■□□□ 1.91
CHMP6-204ENST00000572778 NBPF26B4DH59 902 aa27■■□□□ 1.91
CHMP6-204ENST00000572778 NBPF10Q6P3W6 841 aaKnown RBP27■■□□□ 1.91
CHMP6-204ENST00000572778 PELP1Q8IZL8 1130 aaKnown RBP27■■□□□ 1.91
CHMP6-204ENST00000572778 NBPF15Q8N660 670 aa27■■□□□ 1.91
CHMP6-204ENST00000572778 TM4SF1P30408 202 aa26.99■■□□□ 1.91
CHMP6-204ENST00000572778 DDR1Q08345 913 aa26.99■■□□□ 1.91
CHMP6-204ENST00000572778 DZIP3Q86Y13 1208 aaKnown RBP26.99■■□□□ 1.91
CHMP6-204ENST00000572778 GPR162Q16538 588 aa26.98■■□□□ 1.91
CHMP6-204ENST00000572778 FAM9BQ8IZU0 186 aa26.98■■□□□ 1.91
CHMP6-204ENST00000572778 CALD1Q05682 793 aaKnown RBP26.97■■□□□ 1.91
CHMP6-204ENST00000572778 NFIXQ14938 502 aa26.97■■□□□ 1.91
CHMP6-204ENST00000572778 CFAP44Q96MT7 982 aa26.97■■□□□ 1.91
CHMP6-204ENST00000572778 POLRMTO00411 1230 aaKnown RBP26.96■■□□□ 1.91
CHMP6-204ENST00000572778 BICDL1Q6ZP65 573 aa26.96■■□□□ 1.91
CHMP6-204ENST00000572778 CAMTA2O94983 1202 aa26.95■■□□□ 1.9
CHMP6-204ENST00000572778 EIF2S2P20042 333 aaKnown RBP26.95■■□□□ 1.9
CHMP6-204ENST00000572778 NGEFQ8N5V2 710 aa26.95■■□□□ 1.9
CHMP6-204ENST00000572778 MYL6BP14649 208 aa26.93■■□□□ 1.9
CHMP6-204ENST00000572778 KRT24Q2M2I5 525 aa26.93■■□□□ 1.9
CHMP6-204ENST00000572778 TBC1D9BQ66K14 1250 aa26.93■■□□□ 1.9
CHMP6-204ENST00000572778 GNAI1P63096 354 aa26.92■■□□□ 1.9
CHMP6-204ENST00000572778 MBIPQ9NS73 344 aa26.92■■□□□ 1.9
CHMP6-204ENST00000572778 IFT57Q9NWB7 429 aa26.92■■□□□ 1.9
CHMP6-204ENST00000572778 SERPINB2P05120 415 aa26.91■■□□□ 1.9
CHMP6-204ENST00000572778 NECTIN2Q92692 538 aa26.91■■□□□ 1.9
CHMP6-204ENST00000572778 WWC3Q9ULE0 1092 aa26.91■■□□□ 1.9
CHMP6-204ENST00000572778 C10orf71Q711Q0 1435 aa26.9■■□□□ 1.9
CHMP6-204ENST00000572778 ZNF853P0CG23 659 aa26.9■■□□□ 1.9
CHMP6-204ENST00000572778 TGFB2P61812 414 aa26.9■■□□□ 1.9
CHMP6-204ENST00000572778 SALL2Q9Y467 1007 aaPredicted RBP26.9■■□□□ 1.9
CHMP6-204ENST00000572778 LAMB4A4D0S4 1761 aa26.89■■□□□ 1.9
CHMP6-204ENST00000572778 CCDC27Q2M243 656 aa26.89■■□□□ 1.9
CHMP6-204ENST00000572778 ZNF652Q9Y2D9 606 aa26.89■■□□□ 1.9
CHMP6-204ENST00000572778 ERBB4Q15303 1308 aa26.89■■□□□ 1.89
CHMP6-204ENST00000572778 WWC1Q8IX03 1113 aa26.88■■□□□ 1.89
CHMP6-204ENST00000572778 A0A0G2JLW4 131 aa26.87■■□□□ 1.89
CHMP6-204ENST00000572778 YBX3P16989 372 aaKnown RBP eCLIP26.87■■□□□ 1.89
CHMP6-204ENST00000572778 SETDB2Q96T68 719 aa26.87■■□□□ 1.89
CHMP6-204ENST00000572778 CLEC4GQ6UXB4 293 aa26.86■■□□□ 1.89
CHMP6-204ENST00000572778 KIF6Q6ZMV9 814 aa26.86■■□□□ 1.89
CHMP6-204ENST00000572778 DPEP1P16444 411 aa26.85■■□□□ 1.89
CHMP6-204ENST00000572778 DUSP27Q5VZP5 1158 aa26.85■■□□□ 1.89
CHMP6-204ENST00000572778 TTLL7Q6ZT98 887 aa26.85■■□□□ 1.89
CHMP6-204ENST00000572778 PXDNLA1KZ92 1463 aa26.85■■□□□ 1.89
CHMP6-204ENST00000572778 SCN7AQ01118 1682 aa26.85■■□□□ 1.89
CHMP6-204ENST00000572778 CARMIL3Q8ND23 1372 aa26.84■■□□□ 1.89
CHMP6-204ENST00000572778 ANXA1P04083 346 aa26.84■■□□□ 1.89
CHMP6-204ENST00000572778 PDIA6Q15084 440 aa26.84■■□□□ 1.89
CHMP6-204ENST00000572778 NCBP3Q53F19 620 aaKnown RBP26.84■■□□□ 1.89
CHMP6-204ENST00000572778 HOXB7P09629 217 aa26.83■■□□□ 1.89
CHMP6-204ENST00000572778 HLFQ16534 295 aa26.83■■□□□ 1.89
CHMP6-204ENST00000572778 PROSER3Q2NL68 480 aa26.83■■□□□ 1.89
CHMP6-204ENST00000572778 HDGFL1Q5TGJ6 251 aa26.83■■□□□ 1.89
CHMP6-204ENST00000572778 ELL2O00472 640 aaPredicted RBP26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms