RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 DUSP27Q5VZP5 1158 aa18.77■□□□□ 0.6
NPLOC4-209ENST00000572760 CDCA7LQ96GN5 454 aa18.77■□□□□ 0.6
NPLOC4-209ENST00000572760 TFCP2L1Q9NZI6 479 aa18.77■□□□□ 0.6
NPLOC4-209ENST00000572760 CNTNAP4Q9C0A0 1308 aa18.76■□□□□ 0.59
NPLOC4-209ENST00000572760 UBR3Q6ZT12 1888 aa18.76■□□□□ 0.59
NPLOC4-209ENST00000572760 GNPATO15228 680 aa18.76■□□□□ 0.59
NPLOC4-209ENST00000572760 CRKLP46109 303 aaKnown RBP18.76■□□□□ 0.59
NPLOC4-209ENST00000572760 SLFN5Q08AF3 891 aa18.76■□□□□ 0.59
NPLOC4-209ENST00000572760 SLC15A2Q16348 729 aa18.76■□□□□ 0.59
NPLOC4-209ENST00000572760 RC3H1Q5TC82 1133 aaKnown RBP18.76■□□□□ 0.59
NPLOC4-209ENST00000572760 NPM2Q86SE8 214 aaKnown RBP18.76■□□□□ 0.59
NPLOC4-209ENST00000572760 CCDC87Q9NVE4 849 aa18.76■□□□□ 0.59
NPLOC4-209ENST00000572760 TUBGCP6Q96RT7 1819 aa18.76■□□□□ 0.59
NPLOC4-209ENST00000572760 CANXP27824 592 aaKnown RBP18.75■□□□□ 0.59
NPLOC4-209ENST00000572760 ZNF827Q17R98 1081 aa18.75■□□□□ 0.59
NPLOC4-209ENST00000572760 AKT1S1Q96B36 256 aa18.75■□□□□ 0.59
NPLOC4-209ENST00000572760 ANO8Q9HCE9 1232 aaPredicted RBP18.75■□□□□ 0.59
NPLOC4-209ENST00000572760 A1BGP04217 495 aa18.74■□□□□ 0.59
NPLOC4-209ENST00000572760 HOXB7P09629 217 aa18.74■□□□□ 0.59
NPLOC4-209ENST00000572760 EXOSC9Q06265 439 aaKnown RBP18.74■□□□□ 0.59
NPLOC4-209ENST00000572760 C8orf58Q8NAV2 365 aa18.74■□□□□ 0.59
NPLOC4-209ENST00000572760 CHMP4AQ9BY43 222 aa18.74■□□□□ 0.59
NPLOC4-209ENST00000572760 RTCBQ9Y3I0 505 aaKnown RBP18.74■□□□□ 0.59
NPLOC4-209ENST00000572760 CACNA1FO60840 1977 aa18.73■□□□□ 0.59
NPLOC4-209ENST00000572760 TWISTNBQ3B726 338 aaPredicted RBP18.73■□□□□ 0.59
NPLOC4-209ENST00000572760 HDGFL1Q5TGJ6 251 aa18.73■□□□□ 0.59
NPLOC4-209ENST00000572760 NECTIN2Q92692 538 aa18.73■□□□□ 0.59
NPLOC4-209ENST00000572760 ZNF330Q9Y3S2 320 aaPredicted RBP18.73■□□□□ 0.59
NPLOC4-209ENST00000572760 QSER1Q2KHR3 1735 aa18.73■□□□□ 0.59
NPLOC4-209ENST00000572760 MSH5O43196 834 aa18.72■□□□□ 0.59
NPLOC4-209ENST00000572760 RPS6KA4O75676 772 aa18.72■□□□□ 0.59
NPLOC4-209ENST00000572760 PHF14O94880 888 aa18.72■□□□□ 0.59
NPLOC4-209ENST00000572760 R3HDM1Q15032 1099 aaKnown RBP18.72■□□□□ 0.59
NPLOC4-209ENST00000572760 INTS5Q6P9B9 1019 aaKnown RBP18.72■□□□□ 0.59
NPLOC4-209ENST00000572760 FLAD1Q8NFF5 587 aa18.72■□□□□ 0.59
NPLOC4-209ENST00000572760 ZBTB1Q9Y2K1 713 aa18.72■□□□□ 0.59
NPLOC4-209ENST00000572760 SOS1Q07889 1333 aaPredicted RBP18.72■□□□□ 0.59
NPLOC4-209ENST00000572760 PSDA5PKW4 1024 aaPredicted RBP18.71■□□□□ 0.59
NPLOC4-209ENST00000572760 TSPYL6Q8N831 410 aa18.71■□□□□ 0.59
NPLOC4-209ENST00000572760 PIP4K2AP48426 406 aaPredicted RBP18.7■□□□□ 0.58
NPLOC4-209ENST00000572760 TRAPPC3LQ5T215 181 aa18.7■□□□□ 0.58
NPLOC4-209ENST00000572760 ARXQ96QS3 562 aa18.7■□□□□ 0.58
NPLOC4-209ENST00000572760 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.69■□□□□ 0.58
NPLOC4-209ENST00000572760 MYL6BP14649 208 aa18.69■□□□□ 0.58
NPLOC4-209ENST00000572760 SSFA2P28290 1259 aa18.69■□□□□ 0.58
NPLOC4-209ENST00000572760 IL6STP40189 918 aaPredicted RBP18.69■□□□□ 0.58
NPLOC4-209ENST00000572760 CCDC30Q5VVM6 783 aa18.69■□□□□ 0.58
NPLOC4-209ENST00000572760 ERBB4Q15303 1308 aa18.69■□□□□ 0.58
NPLOC4-209ENST00000572760 TRMT2AQ8IZ69 625 aaKnown RBP18.68■□□□□ 0.58
NPLOC4-209ENST00000572760 A0A087WZG4 1122 aa18.67■□□□□ 0.58
NPLOC4-209ENST00000572760 VAMP4O75379 141 aa18.67■□□□□ 0.58
NPLOC4-209ENST00000572760 ADRA2BP18089 450 aa18.67■□□□□ 0.58
NPLOC4-209ENST00000572760 RFC4P35249 363 aa18.67■□□□□ 0.58
NPLOC4-209ENST00000572760 SMIM5Q71RC9 77 aa18.67■□□□□ 0.58
NPLOC4-209ENST00000572760 STK31Q9BXU1 1019 aa18.67■□□□□ 0.58
NPLOC4-209ENST00000572760 PNPLA7Q6ZV29 1317 aa18.67■□□□□ 0.58
NPLOC4-209ENST00000572760 NBPF26B4DH59 902 aa18.66■□□□□ 0.58
NPLOC4-209ENST00000572760 NBPF10Q6P3W6 841 aaKnown RBP18.66■□□□□ 0.58
NPLOC4-209ENST00000572760 COL23A1Q86Y22 540 aaPredicted RBP18.66■□□□□ 0.58
NPLOC4-209ENST00000572760 NBPF15Q8N660 670 aa18.66■□□□□ 0.58
NPLOC4-209ENST00000572760 DDX21Q9NR30 783 aaKnown RBP eCLIP18.66■□□□□ 0.58
NPLOC4-209ENST00000572760 CHPF2Q9P2E5 772 aa18.66■□□□□ 0.58
NPLOC4-209ENST00000572760 DBF4Q9UBU7 674 aaPredicted RBP18.66■□□□□ 0.58
NPLOC4-209ENST00000572760 COL15A1P39059 1388 aa18.66■□□□□ 0.58
NPLOC4-209ENST00000572760 C4AP0C0L4 1744 aa18.66■□□□□ 0.58
NPLOC4-209ENST00000572760 TCERG1O14776 1098 aaKnown RBP18.65■□□□□ 0.58
NPLOC4-209ENST00000572760 ANXA1P04083 346 aa18.65■□□□□ 0.58
NPLOC4-209ENST00000572760 EIF5P55010 431 aaKnown RBP18.65■□□□□ 0.58
NPLOC4-209ENST00000572760 ARHGEF1Q92888 912 aaKnown RBP18.65■□□□□ 0.58
NPLOC4-209ENST00000572760 ZPR1O75312 459 aa18.64■□□□□ 0.57
NPLOC4-209ENST00000572760 AMIGO3Q86WK7 504 aa18.64■□□□□ 0.57
NPLOC4-209ENST00000572760 HYPKQ9NX55 129 aa18.63■□□□□ 0.57
NPLOC4-209ENST00000572760 TBC1D2BQ9UPU7 963 aa18.63■□□□□ 0.57
NPLOC4-209ENST00000572760 CT47B1P0C2W7 299 aaPredicted RBP18.62■□□□□ 0.57
NPLOC4-209ENST00000572760 AIMP1Q12904 312 aaKnown RBP18.62■□□□□ 0.57
NPLOC4-209ENST00000572760 PDIA6Q15084 440 aa18.62■□□□□ 0.57
NPLOC4-209ENST00000572760 PROSER3Q2NL68 480 aa18.62■□□□□ 0.57
NPLOC4-209ENST00000572760 KIF6Q6ZMV9 814 aa18.62■□□□□ 0.57
NPLOC4-209ENST00000572760 DZIP3Q86Y13 1208 aaKnown RBP18.62■□□□□ 0.57
NPLOC4-209ENST00000572760 CASZ1Q86V15 1759 aa18.61■□□□□ 0.57
NPLOC4-209ENST00000572760 SLC16A10Q8TF71 515 aa18.61■□□□□ 0.57
NPLOC4-209ENST00000572760 PDGFDQ9GZP0 370 aaPredicted RBP18.61■□□□□ 0.57
NPLOC4-209ENST00000572760 NARFQ9UHQ1 456 aa18.61■□□□□ 0.57
NPLOC4-209ENST00000572760 NUP98P52948 1817 aa18.6■□□□□ 0.57
NPLOC4-209ENST00000572760 SLC4A2P04920 1241 aa18.6■□□□□ 0.57
NPLOC4-209ENST00000572760 XAGE3Q8WTP9 111 aa18.6■□□□□ 0.57
NPLOC4-209ENST00000572760 ZNF428Q96B54 188 aa18.6■□□□□ 0.57
NPLOC4-209ENST00000572760 SRP68Q9UHB9 627 aaKnown RBP18.6■□□□□ 0.57
NPLOC4-209ENST00000572760 USP42Q9H9J4 1324 aaKnown RBP18.59■□□□□ 0.57
NPLOC4-209ENST00000572760 USPL1Q5W0Q7 1092 aa18.59■□□□□ 0.57
NPLOC4-209ENST00000572760 COPS6Q7L5N1 327 aa18.59■□□□□ 0.57
NPLOC4-209ENST00000572760 ZBTB7AO95365 584 aa18.58■□□□□ 0.56
NPLOC4-209ENST00000572760 TTLL7Q6ZT98 887 aa18.58■□□□□ 0.56
NPLOC4-209ENST00000572760 BCORQ6W2J9 1755 aa18.58■□□□□ 0.56
NPLOC4-209ENST00000572760 MSL1Q68DK7 614 aa18.57■□□□□ 0.56
NPLOC4-209ENST00000572760 ZBTB3Q9H5J0 574 aa18.57■□□□□ 0.56
NPLOC4-209ENST00000572760 PHAXQ9H814 394 aaKnown RBP18.57■□□□□ 0.56
NPLOC4-209ENST00000572760 ZNF652Q9Y2D9 606 aa18.57■□□□□ 0.56
NPLOC4-209ENST00000572760 MAP3K15Q6ZN16 1313 aa18.56■□□□□ 0.56
NPLOC4-209ENST00000572760 DDX58O95786 925 aaKnown RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms