RNA–Protein interactions for RNA: ENST00000570904.5

LITAF-205, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-205ENST00000570904 ZNF790Q6PG37 636 aa27.66■■■□□ 2.02
LITAF-205ENST00000570904 ZNF496Q96IT1 587 aaPredicted RBP27.66■■■□□ 2.02
LITAF-205ENST00000570904 CEMIPQ8WUJ3 1361 aa27.65■■■□□ 2.02
LITAF-205ENST00000570904 GIGYF1O75420 1035 aaPredicted RBP27.65■■■□□ 2.02
LITAF-205ENST00000570904 BCS1LQ9Y276 419 aa27.65■■■□□ 2.02
LITAF-205ENST00000570904 CANXP27824 592 aaKnown RBP27.64■■■□□ 2.02
LITAF-205ENST00000570904 C1QTNF8P60827 252 aa27.64■■■□□ 2.02
LITAF-205ENST00000570904 ADCY9O60503 1353 aa27.63■■■□□ 2.01
LITAF-205ENST00000570904 HEG1Q9ULI3 1381 aa27.63■■■□□ 2.01
LITAF-205ENST00000570904 POLRMTO00411 1230 aaKnown RBP27.63■■■□□ 2.01
LITAF-205ENST00000570904 NARFQ9UHQ1 456 aa27.63■■■□□ 2.01
LITAF-205ENST00000570904 TM4SF1P30408 202 aa27.62■■■□□ 2.01
LITAF-205ENST00000570904 STARD3NLO95772 234 aa27.61■■■□□ 2.01
LITAF-205ENST00000570904 KCNQ3O43525 872 aa27.6■■■□□ 2.01
LITAF-205ENST00000570904 FCHSD2O94868 740 aa27.6■■■□□ 2.01
LITAF-205ENST00000570904 BCL2L12Q9HB09 334 aa27.6■■■□□ 2.01
LITAF-205ENST00000570904 BTBD11A6QL63 1104 aa27.59■■■□□ 2.01
LITAF-205ENST00000570904 KCNA3P22001 575 aa27.59■■■□□ 2.01
LITAF-205ENST00000570904 FMNL2Q96PY5 1086 aa27.59■■■□□ 2.01
LITAF-205ENST00000570904 NFIXQ14938 502 aa27.58■■■□□ 2.01
LITAF-205ENST00000570904 MCM10Q7L590 875 aa27.58■■■□□ 2.01
LITAF-205ENST00000570904 ZNF526Q8TF50 670 aaPredicted RBP27.58■■■□□ 2.01
LITAF-205ENST00000570904 EIF5P55010 431 aaKnown RBP27.57■■■□□ 2
LITAF-205ENST00000570904 RTF1Q92541 710 aaKnown RBP27.57■■■□□ 2
LITAF-205ENST00000570904 BRCA1P38398 1863 aaKnown RBP27.57■■■□□ 2
LITAF-205ENST00000570904 TEX13AQ9BXU3 409 aaPredicted RBP27.56■■■□□ 2
LITAF-205ENST00000570904 CHRNA5P30532 468 aa27.55■■■□□ 2
LITAF-205ENST00000570904 DCTN1Q14203 1278 aa27.55■■■□□ 2
LITAF-205ENST00000570904 GPBP1L1Q9HC44 474 aaPredicted RBP27.55■■■□□ 2
LITAF-205ENST00000570904 ZNF330Q9Y3S2 320 aaPredicted RBP27.55■■■□□ 2
LITAF-205ENST00000570904 ARHGAP27Q6ZUM4 889 aa27.54■■■□□ 2
LITAF-205ENST00000570904 PIM2Q9P1W9 311 aa27.54■■■□□ 2
LITAF-205ENST00000570904 SENP3-EIF4A1A0A087X0R7 540 aa27.53■■■□□ 2
LITAF-205ENST00000570904 A0A087WZG4 1122 aa27.52■■■□□ 2
LITAF-205ENST00000570904 A1BGP04217 495 aa27.52■■■□□ 2
LITAF-205ENST00000570904 AFDNP55196 1824 aaKnown RBP27.52■■■□□ 2
LITAF-205ENST00000570904 SERPINB2P05120 415 aa27.51■■□□□ 1.99
LITAF-205ENST00000570904 DALRD3Q5D0E6 543 aaKnown RBP27.51■■□□□ 1.99
LITAF-205ENST00000570904 BICDL1Q6ZP65 573 aa27.51■■□□□ 1.99
LITAF-205ENST00000570904 NRXN2Q9P2S2 1712 aa27.5■■□□□ 1.99
LITAF-205ENST00000570904 TBC1D2BQ9UPU7 963 aa27.5■■□□□ 1.99
LITAF-205ENST00000570904 PRAMEF22A3QJZ6 481 aa27.49■■□□□ 1.99
LITAF-205ENST00000570904 IL6STP40189 918 aaPredicted RBP27.49■■□□□ 1.99
LITAF-205ENST00000570904 SCN7AQ01118 1682 aa27.49■■□□□ 1.99
LITAF-205ENST00000570904 HTATSF1O43719 755 aaKnown RBP27.48■■□□□ 1.99
LITAF-205ENST00000570904 USP16Q9Y5T5 823 aa27.48■■□□□ 1.99
LITAF-205ENST00000570904 ARFGEF1Q9Y6D6 1849 aa27.48■■□□□ 1.99
LITAF-205ENST00000570904 PIP4K2AP48426 406 aaPredicted RBP27.47■■□□□ 1.99
LITAF-205ENST00000570904 TBC1D9BQ66K14 1250 aa27.47■■□□□ 1.99
LITAF-205ENST00000570904 CARMIL3Q8ND23 1372 aa27.47■■□□□ 1.99
LITAF-205ENST00000570904 NEFMP07197 916 aa27.45■■□□□ 1.98
LITAF-205ENST00000570904 SNRPA1P09661 255 aaKnown RBP27.44■■□□□ 1.98
LITAF-205ENST00000570904 NPM2Q86SE8 214 aaKnown RBP27.44■■□□□ 1.98
LITAF-205ENST00000570904 PLEKHF1Q96S99 279 aa27.44■■□□□ 1.98
LITAF-205ENST00000570904 CAMTA2O94983 1202 aa27.43■■□□□ 1.98
LITAF-205ENST00000570904 TAF7Q15545 349 aaPredicted RBP27.42■■□□□ 1.98
LITAF-205ENST00000570904 MIS18AQ9NYP9 233 aa27.42■■□□□ 1.98
LITAF-205ENST00000570904 C9orf131Q5VYM1 1079 aa27.41■■□□□ 1.98
LITAF-205ENST00000570904 DZIP3Q86Y13 1208 aaKnown RBP27.41■■□□□ 1.98
LITAF-205ENST00000570904 DLG5Q8TDM6 1919 aa27.4■■□□□ 1.98
LITAF-205ENST00000570904 C2CD5Q86YS7 1000 aa27.4■■□□□ 1.98
LITAF-205ENST00000570904 NFE2L2Q16236 605 aa27.39■■□□□ 1.98
LITAF-205ENST00000570904 CCDC24Q8N4L8 307 aa27.39■■□□□ 1.98
LITAF-205ENST00000570904 BCORQ6W2J9 1755 aa27.38■■□□□ 1.97
LITAF-205ENST00000570904 KIF3CO14782 793 aa27.38■■□□□ 1.97
LITAF-205ENST00000570904 DDX10Q13206 875 aaKnown RBP27.38■■□□□ 1.97
LITAF-205ENST00000570904 RALBP1Q15311 655 aa27.38■■□□□ 1.97
LITAF-205ENST00000570904 PRR5LQ6MZQ0 368 aa27.38■■□□□ 1.97
LITAF-205ENST00000570904 THUMPD2Q9BTF0 503 aaKnown RBP27.38■■□□□ 1.97
LITAF-205ENST00000570904 MAPK8IP3Q9UPT6 1336 aa27.38■■□□□ 1.97
LITAF-205ENST00000570904 DLEC1Q9Y238 1755 aa27.37■■□□□ 1.97
LITAF-205ENST00000570904 H0YIN7 160 aa27.36■■□□□ 1.97
LITAF-205ENST00000570904 TTLL6Q8N841 843 aa27.36■■□□□ 1.97
LITAF-205ENST00000570904 SETDB2Q96T68 719 aa27.36■■□□□ 1.97
LITAF-205ENST00000570904 RNF181Q9P0P0 153 aa27.36■■□□□ 1.97
LITAF-205ENST00000570904 NBPF26B4DH59 902 aa27.35■■□□□ 1.97
LITAF-205ENST00000570904 RASSF7Q02833 373 aa27.35■■□□□ 1.97
LITAF-205ENST00000570904 NBPF10Q6P3W6 841 aaKnown RBP27.35■■□□□ 1.97
LITAF-205ENST00000570904 NBPF15Q8N660 670 aa27.35■■□□□ 1.97
LITAF-205ENST00000570904 ANKRD31Q8N7Z5 1873 aa27.35■■□□□ 1.97
LITAF-205ENST00000570904 CEP350Q5VT06 3117 aa27.34■■□□□ 1.97
LITAF-205ENST00000570904 PNNQ9H307 717 aaKnown RBP27.34■■□□□ 1.97
LITAF-205ENST00000570904 KDM3BQ7LBC6 1761 aa27.33■■□□□ 1.97
LITAF-205ENST00000570904 CNBD1Q8NA66 436 aa27.33■■□□□ 1.97
LITAF-205ENST00000570904 PNISRQ8TF01 805 aaKnown RBP27.33■■□□□ 1.97
LITAF-205ENST00000570904 BRIP1Q9BX63 1249 aa27.33■■□□□ 1.97
LITAF-205ENST00000570904 NPHP1O15259 732 aa27.32■■□□□ 1.96
LITAF-205ENST00000570904 NMRK2Q9NPI5 230 aa27.32■■□□□ 1.96
LITAF-205ENST00000570904 COL11A2P13942 1736 aaPredicted RBP27.31■■□□□ 1.96
LITAF-205ENST00000570904 LAMB4A4D0S4 1761 aa27.31■■□□□ 1.96
LITAF-205ENST00000570904 PDE6BP35913 854 aa27.31■■□□□ 1.96
LITAF-205ENST00000570904 ZNF622Q969S3 477 aaKnown RBP eCLIP27.31■■□□□ 1.96
LITAF-205ENST00000570904 EIF4A1P60842 406 aaKnown RBP27.29■■□□□ 1.96
LITAF-205ENST00000570904 ST5P78524 1137 aa27.29■■□□□ 1.96
LITAF-205ENST00000570904 CLEC4GQ6UXB4 293 aa27.29■■□□□ 1.96
LITAF-205ENST00000570904 ZNF652Q9Y2D9 606 aa27.29■■□□□ 1.96
LITAF-205ENST00000570904 SBF1O95248 1867 aa27.28■■□□□ 1.96
LITAF-205ENST00000570904 MYBBP1AQ9BQG0 1328 aaKnown RBP27.28■■□□□ 1.96
LITAF-205ENST00000570904 PDZRN3Q9UPQ7 1066 aa27.28■■□□□ 1.96
LITAF-205ENST00000570904 PRELPP51888 382 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms