RNA–Protein interactions for RNA: ENST00000570193.5

PKD1-239, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-239ENST00000570193 ZBTB1Q9Y2K1 713 aa20.42■□□□□ 0.86
PKD1-239ENST00000570193 SOS1Q07889 1333 aaPredicted RBP20.41■□□□□ 0.86
PKD1-239ENST00000570193 SIPA1L3O60292 1781 aaPredicted RBP20.41■□□□□ 0.86
PKD1-239ENST00000570193 UBR2Q8IWV8 1755 aa20.41■□□□□ 0.86
PKD1-239ENST00000570193 USP42Q9H9J4 1324 aaKnown RBP20.4■□□□□ 0.86
PKD1-239ENST00000570193 PARP3Q9Y6F1 533 aa20.4■□□□□ 0.86
PKD1-239ENST00000570193 YY1P25490 414 aa20.39■□□□□ 0.85
PKD1-239ENST00000570193 ZNF330Q9Y3S2 320 aaPredicted RBP20.39■□□□□ 0.85
PKD1-239ENST00000570193 FKBP8Q14318 412 aa20.38■□□□□ 0.85
PKD1-239ENST00000570193 USPL1Q5W0Q7 1092 aa20.38■□□□□ 0.85
PKD1-239ENST00000570193 NPM2Q86SE8 214 aaKnown RBP20.38■□□□□ 0.85
PKD1-239ENST00000570193 CCDC146Q8IYE0 955 aa20.38■□□□□ 0.85
PKD1-239ENST00000570193 THUMPD2Q9BTF0 503 aaKnown RBP20.38■□□□□ 0.85
PKD1-239ENST00000570193 MIS18AQ9NYP9 233 aa20.38■□□□□ 0.85
PKD1-239ENST00000570193 COL15A1P39059 1388 aa20.37■□□□□ 0.85
PKD1-239ENST00000570193 RIPK4P57078 832 aa20.37■□□□□ 0.85
PKD1-239ENST00000570193 PNISRQ8TF01 805 aaKnown RBP20.37■□□□□ 0.85
PKD1-239ENST00000570193 C4AP0C0L4 1744 aa20.36■□□□□ 0.85
PKD1-239ENST00000570193 SNRPA1P09661 255 aaKnown RBP20.36■□□□□ 0.85
PKD1-239ENST00000570193 NARFQ9UHQ1 456 aa20.36■□□□□ 0.85
PKD1-239ENST00000570193 A0A087WZG4 1122 aa20.35■□□□□ 0.85
PKD1-239ENST00000570193 A1BGP04217 495 aa20.35■□□□□ 0.85
PKD1-239ENST00000570193 TMPOP42166 694 aaKnown RBP20.35■□□□□ 0.85
PKD1-239ENST00000570193 ADAMTS8Q9UP79 889 aa20.35■□□□□ 0.85
PKD1-239ENST00000570193 EIF5P55010 431 aaKnown RBP20.34■□□□□ 0.85
PKD1-239ENST00000570193 LMOD3Q0VAK6 560 aa20.34■□□□□ 0.85
PKD1-239ENST00000570193 NEUROD2Q15784 382 aa20.34■□□□□ 0.85
PKD1-239ENST00000570193 RUNDC1Q96C34 613 aa20.34■□□□□ 0.85
PKD1-239ENST00000570193 RRP7AQ9Y3A4 280 aaKnown RBP20.34■□□□□ 0.85
PKD1-239ENST00000570193 USP16Q9Y5T5 823 aa20.34■□□□□ 0.85
PKD1-239ENST00000570193 DLG5Q8TDM6 1919 aa20.33■□□□□ 0.85
PKD1-239ENST00000570193 PRAMEF22A3QJZ6 481 aa20.33■□□□□ 0.85
PKD1-239ENST00000570193 IL6STP40189 918 aaPredicted RBP20.33■□□□□ 0.85
PKD1-239ENST00000570193 WWC3Q9ULE0 1092 aa20.33■□□□□ 0.85
PKD1-239ENST00000570193 GOLGB1Q14789 3259 aaKnown RBP20.33■□□□□ 0.85
PKD1-239ENST00000570193 GRIN3BO60391 1043 aa20.32■□□□□ 0.84
PKD1-239ENST00000570193 YBX3P16989 372 aaKnown RBP eCLIP20.32■□□□□ 0.84
PKD1-239ENST00000570193 UTRNP46939 3433 aa20.31■□□□□ 0.84
PKD1-239ENST00000570193 DDR1Q08345 913 aa20.31■□□□□ 0.84
PKD1-239ENST00000570193 TBC1D2BQ9UPU7 963 aa20.31■□□□□ 0.84
PKD1-239ENST00000570193 TM4SF1P30408 202 aa20.3■□□□□ 0.84
PKD1-239ENST00000570193 PIP4K2AP48426 406 aaPredicted RBP20.3■□□□□ 0.84
PKD1-239ENST00000570193 TGFB2P61812 414 aa20.3■□□□□ 0.84
PKD1-239ENST00000570193 TSPYL4Q9UJ04 414 aa20.3■□□□□ 0.84
PKD1-239ENST00000570193 ANP32CO43423 234 aa20.29■□□□□ 0.84
PKD1-239ENST00000570193 NFIXQ14938 502 aa20.29■□□□□ 0.84
PKD1-239ENST00000570193 BICDL1Q6ZP65 573 aa20.29■□□□□ 0.84
PKD1-239ENST00000570193 C10orf71Q711Q0 1435 aa20.28■□□□□ 0.84
PKD1-239ENST00000570193 A0A0G2JLW4 131 aa20.28■□□□□ 0.84
PKD1-239ENST00000570193 POLRMTO00411 1230 aaKnown RBP20.28■□□□□ 0.84
PKD1-239ENST00000570193 EIF4A1P60842 406 aaKnown RBP20.28■□□□□ 0.84
PKD1-239ENST00000570193 BCL2L12Q9HB09 334 aa20.28■□□□□ 0.84
PKD1-239ENST00000570193 DZIP3Q86Y13 1208 aaKnown RBP20.27■□□□□ 0.84
PKD1-239ENST00000570193 GIGYF1O75420 1035 aaPredicted RBP20.26■□□□□ 0.83
PKD1-239ENST00000570193 SERPINB2P05120 415 aa20.25■□□□□ 0.83
PKD1-239ENST00000570193 DPEP1P16444 411 aa20.25■□□□□ 0.83
PKD1-239ENST00000570193 LAS1LQ9Y4W2 734 aaKnown RBP20.25■□□□□ 0.83
PKD1-239ENST00000570193 PXDNLA1KZ92 1463 aa20.24■□□□□ 0.83
PKD1-239ENST00000570193 TBC1D9BQ66K14 1250 aa20.24■□□□□ 0.83
PKD1-239ENST00000570193 NBPF26B4DH59 902 aa20.23■□□□□ 0.83
PKD1-239ENST00000570193 CAMTA2O94983 1202 aa20.23■□□□□ 0.83
PKD1-239ENST00000570193 NBPF10Q6P3W6 841 aaKnown RBP20.23■□□□□ 0.83
PKD1-239ENST00000570193 NBPF15Q8N660 670 aa20.23■□□□□ 0.83
PKD1-239ENST00000570193 BABAM1Q9NWV8 329 aa20.23■□□□□ 0.83
PKD1-239ENST00000570193 TRIM35Q9UPQ4 493 aa20.23■□□□□ 0.83
PKD1-239ENST00000570193 BCS1LQ9Y276 419 aa20.23■□□□□ 0.83
PKD1-239ENST00000570193 KDM3BQ7LBC6 1761 aa20.23■□□□□ 0.83
PKD1-239ENST00000570193 APAF1O14727 1248 aa20.22■□□□□ 0.83
PKD1-239ENST00000570193 CCDC184Q52MB2 194 aa20.22■□□□□ 0.83
PKD1-239ENST00000570193 NGEFQ8N5V2 710 aa20.22■□□□□ 0.83
PKD1-239ENST00000570193 KIF13BQ9NQT8 1826 aa20.21■□□□□ 0.83
PKD1-239ENST00000570193 NPHP1O15259 732 aa20.21■□□□□ 0.83
PKD1-239ENST00000570193 SETDB2Q96T68 719 aa20.21■□□□□ 0.83
PKD1-239ENST00000570193 ZNF652Q9Y2D9 606 aa20.21■□□□□ 0.83
PKD1-239ENST00000570193 MRS2Q9HD23 443 aa20.2■□□□□ 0.82
PKD1-239ENST00000570193 CHD4Q14839 1912 aa20.19■□□□□ 0.82
PKD1-239ENST00000570193 N4BP2Q86UW6 1770 aaPredicted RBP20.19■□□□□ 0.82
PKD1-239ENST00000570193 MYL6BP14649 208 aa20.19■□□□□ 0.82
PKD1-239ENST00000570193 EIF2S2P20042 333 aaKnown RBP20.19■□□□□ 0.82
PKD1-239ENST00000570193 CHRNA5P30532 468 aa20.19■□□□□ 0.82
PKD1-239ENST00000570193 PIM2Q9P1W9 311 aa20.19■□□□□ 0.82
PKD1-239ENST00000570193 KCNA3P22001 575 aa20.18■□□□□ 0.82
PKD1-239ENST00000570193 SCN7AQ01118 1682 aa20.18■□□□□ 0.82
PKD1-239ENST00000570193 CARMIL3Q8ND23 1372 aa20.18■□□□□ 0.82
PKD1-239ENST00000570193 CHL1O00533 1208 aa20.17■□□□□ 0.82
PKD1-239ENST00000570193 CLEC4GQ6UXB4 293 aa20.17■□□□□ 0.82
PKD1-239ENST00000570193 LAMB4A4D0S4 1761 aa20.16■□□□□ 0.82
PKD1-239ENST00000570193 DALRD3Q5D0E6 543 aaKnown RBP20.16■□□□□ 0.82
PKD1-239ENST00000570193 KIF6Q6ZMV9 814 aa20.16■□□□□ 0.82
PKD1-239ENST00000570193 CCDC24Q8N4L8 307 aa20.16■□□□□ 0.82
PKD1-239ENST00000570193 ZNF784Q8NCA9 323 aaPredicted RBP20.16■□□□□ 0.82
PKD1-239ENST00000570193 KIAA1551Q9HCM1 1747 aa20.16■□□□□ 0.82
PKD1-239ENST00000570193 CALD1Q05682 793 aaKnown RBP20.15■□□□□ 0.82
PKD1-239ENST00000570193 ARHGAP27Q6ZUM4 889 aa20.15■□□□□ 0.82
PKD1-239ENST00000570193 C2CD5Q86YS7 1000 aa20.15■□□□□ 0.82
PKD1-239ENST00000570193 CNBD1Q8NA66 436 aa20.15■□□□□ 0.82
PKD1-239ENST00000570193 AFDNP55196 1824 aaKnown RBP20.14■□□□□ 0.81
PKD1-239ENST00000570193 ERBB4Q15303 1308 aa20.14■□□□□ 0.81
PKD1-239ENST00000570193 H0YIN7 160 aa20.14■□□□□ 0.81
PKD1-239ENST00000570193 ST5P78524 1137 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 474.1 ms