RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 ZMYM3Q14202 1370 aa4.66□□□□□ -1.66
CNOT1-221ENST00000569924 PLXNC1O60486 1568 aa4.66□□□□□ -1.66
CNOT1-221ENST00000569924 PTCD1O75127 700 aaKnown RBP4.66□□□□□ -1.66
CNOT1-221ENST00000569924 CCNYL3P0C7X3 344 aa4.66□□□□□ -1.66
CNOT1-221ENST00000569924 NCLP19338 710 aaKnown RBP4.66□□□□□ -1.66
CNOT1-221ENST00000569924 WEE1P30291 646 aa4.66□□□□□ -1.66
CNOT1-221ENST00000569924 OXLD1Q5BKU9 147 aa4.66□□□□□ -1.66
CNOT1-221ENST00000569924 LDLRAD1Q5T700 205 aa4.66□□□□□ -1.66
CNOT1-221ENST00000569924 ZBTB33Q86T24 672 aa4.66□□□□□ -1.66
CNOT1-221ENST00000569924 SCUBE3Q8IX30 993 aa4.66□□□□□ -1.66
CNOT1-221ENST00000569924 TPCN2Q8NHX9 752 aa4.66□□□□□ -1.66
CNOT1-221ENST00000569924 PIK3R5Q8WYR1 880 aa4.66□□□□□ -1.66
CNOT1-221ENST00000569924 THAP11Q96EK4 314 aa4.66□□□□□ -1.66
CNOT1-221ENST00000569924 ARHGAP9Q9BRR9 750 aa4.66□□□□□ -1.66
CNOT1-221ENST00000569924 SPAG9O60271 1321 aaKnown RBP4.66□□□□□ -1.66
CNOT1-221ENST00000569924 ATP7AQ04656 1500 aa4.66□□□□□ -1.66
CNOT1-221ENST00000569924 SYCP2Q9BX26 1530 aa4.66□□□□□ -1.66
CNOT1-221ENST00000569924 GPATCH8Q9UKJ3 1502 aaKnown RBP4.66□□□□□ -1.66
CNOT1-221ENST00000569924 INO80Q9ULG1 1556 aaPredicted RBP4.65□□□□□ -1.66
CNOT1-221ENST00000569924 CAMSAP1Q5T5Y3 1602 aa4.65□□□□□ -1.66
CNOT1-221ENST00000569924 ZNF142P52746 1687 aaPredicted RBP4.65□□□□□ -1.66
CNOT1-221ENST00000569924 A2MP01023 1474 aa4.65□□□□□ -1.66
CNOT1-221ENST00000569924 PLA2R1Q13018 1463 aa4.65□□□□□ -1.66
CNOT1-221ENST00000569924 M0R2N6 131 aa4.65□□□□□ -1.67
CNOT1-221ENST00000569924 ARHGAP33O14559 1287 aa4.65□□□□□ -1.67
CNOT1-221ENST00000569924 P4HBP07237 508 aaKnown RBP4.65□□□□□ -1.67
CNOT1-221ENST00000569924 NPR3P17342 541 aa4.65□□□□□ -1.67
CNOT1-221ENST00000569924 MTMR3Q13615 1198 aa4.65□□□□□ -1.67
CNOT1-221ENST00000569924 DZIP3Q86Y13 1208 aaKnown RBP4.65□□□□□ -1.67
CNOT1-221ENST00000569924 COL26A1Q96A83 441 aa4.65□□□□□ -1.67
CNOT1-221ENST00000569924 RBCK1Q9BYM8 510 aa4.65□□□□□ -1.67
CNOT1-221ENST00000569924 CCNB3Q8WWL7 1395 aa4.65□□□□□ -1.67
CNOT1-221ENST00000569924 PTPRKQ15262 1439 aa4.64□□□□□ -1.67
CNOT1-221ENST00000569924 CLTCQ00610 1675 aaKnown RBP4.64□□□□□ -1.67
CNOT1-221ENST00000569924 TCOF1Q13428 1488 aaKnown RBP4.64□□□□□ -1.67
CNOT1-221ENST00000569924 SUPT6HQ7KZ85 1726 aaKnown RBP4.64□□□□□ -1.67
CNOT1-221ENST00000569924 POTEB2H3BUK9 544 aa4.64□□□□□ -1.67
CNOT1-221ENST00000569924 NR1I2O75469 434 aa4.64□□□□□ -1.67
CNOT1-221ENST00000569924 FAM13AO94988 1023 aa4.64□□□□□ -1.67
CNOT1-221ENST00000569924 ITGAEP38570 1179 aa4.64□□□□□ -1.67
CNOT1-221ENST00000569924 HNRNPMP52272 730 aaKnown RBP eCLIP4.64□□□□□ -1.67
CNOT1-221ENST00000569924 FGD1P98174 961 aa4.64□□□□□ -1.67
CNOT1-221ENST00000569924 PSME1Q06323 249 aa4.64□□□□□ -1.67
CNOT1-221ENST00000569924 RAD51AP2Q09MP3 1159 aa4.64□□□□□ -1.67
CNOT1-221ENST00000569924 USP4Q13107 963 aa4.64□□□□□ -1.67
CNOT1-221ENST00000569924 RNF20Q5VTR2 975 aa4.64□□□□□ -1.67
CNOT1-221ENST00000569924 C9orf131Q5VYM1 1079 aa4.64□□□□□ -1.67
CNOT1-221ENST00000569924 CAPN12Q6ZSI9 719 aa4.64□□□□□ -1.67
CNOT1-221ENST00000569924 SH3BP5LQ7L8J4 393 aa4.64□□□□□ -1.67
CNOT1-221ENST00000569924 DPH6Q7L8W6 267 aa4.64□□□□□ -1.67
CNOT1-221ENST00000569924 HELQQ8TDG4 1101 aa4.64□□□□□ -1.67
CNOT1-221ENST00000569924 OTUD5Q96G74 571 aa4.64□□□□□ -1.67
CNOT1-221ENST00000569924 ZFRQ96KR1 1074 aaKnown RBP4.64□□□□□ -1.67
CNOT1-221ENST00000569924 NUDT12Q9BQG2 462 aa4.64□□□□□ -1.67
CNOT1-221ENST00000569924 MKNK1Q9BUB5 465 aa4.64□□□□□ -1.67
CNOT1-221ENST00000569924 NBPF3Q9H094 633 aa4.64□□□□□ -1.67
CNOT1-221ENST00000569924 CFDP1Q9UEE9 299 aaPredicted RBP4.64□□□□□ -1.67
CNOT1-221ENST00000569924 VPS9D1Q9Y2B5 631 aa4.64□□□□□ -1.67
CNOT1-221ENST00000569924 CEP170BQ9Y4F5 1589 aaPredicted RBP4.64□□□□□ -1.67
CNOT1-221ENST00000569924 MYO3AQ8NEV4 1616 aa4.64□□□□□ -1.67
CNOT1-221ENST00000569924 ADGBQ8N7X0 1667 aa4.64□□□□□ -1.67
CNOT1-221ENST00000569924 RTEL1-TNFRSF6BF6WH68 1400 aa4.63□□□□□ -1.67
CNOT1-221ENST00000569924 BHMG1C9JSJ3 638 aaPredicted RBP4.63□□□□□ -1.67
CNOT1-221ENST00000569924 TREHO43280 583 aa4.63□□□□□ -1.67
CNOT1-221ENST00000569924 GIGYF1O75420 1035 aaPredicted RBP4.63□□□□□ -1.67
CNOT1-221ENST00000569924 LGR5O75473 907 aa4.63□□□□□ -1.67
CNOT1-221ENST00000569924 DXOO77932 396 aaKnown RBP4.63□□□□□ -1.67
CNOT1-221ENST00000569924 FKBP5Q13451 457 aaPredicted RBP4.63□□□□□ -1.67
CNOT1-221ENST00000569924 MSS51Q4VC12 460 aa4.63□□□□□ -1.67
CNOT1-221ENST00000569924 DMRTA1Q5VZB9 504 aa4.63□□□□□ -1.67
CNOT1-221ENST00000569924 GIMAP6Q6P9H5 292 aa4.63□□□□□ -1.67
CNOT1-221ENST00000569924 TMC7Q7Z402 723 aa4.63□□□□□ -1.67
CNOT1-221ENST00000569924 METTL16Q86W50 562 aaKnown RBP4.63□□□□□ -1.67
CNOT1-221ENST00000569924 ANKRD13AQ8IZ07 590 aa4.63□□□□□ -1.67
CNOT1-221ENST00000569924 SLC43A3Q8NBI5 491 aa4.63□□□□□ -1.67
CNOT1-221ENST00000569924 CITED4Q96RK1 184 aa4.63□□□□□ -1.67
CNOT1-221ENST00000569924 MTUS2Q5JR59 1369 aa4.63□□□□□ -1.67
CNOT1-221ENST00000569924 A2ML1A8K2U0 1454 aa4.62□□□□□ -1.67
CNOT1-221ENST00000569924 MBD5Q9P267 1494 aa4.62□□□□□ -1.67
CNOT1-221ENST00000569924 FAM135AQ9P2D6 1515 aa4.62□□□□□ -1.67
CNOT1-221ENST00000569924 UBAP1LF5GYI3 381 aa4.62□□□□□ -1.67
CNOT1-221ENST00000569924 SNPHO15079 494 aa4.62□□□□□ -1.67
CNOT1-221ENST00000569924 POTEJP0CG39 1038 aa4.62□□□□□ -1.67
CNOT1-221ENST00000569924 XPCQ01831 940 aaPredicted RBP4.62□□□□□ -1.67
CNOT1-221ENST00000569924 FMR1Q06787 632 aaKnown RBP eCLIP4.62□□□□□ -1.67
CNOT1-221ENST00000569924 NAA30Q147X3 362 aaPredicted RBP4.62□□□□□ -1.67
CNOT1-221ENST00000569924 NOP9Q86U38 636 aaKnown RBP4.62□□□□□ -1.67
CNOT1-221ENST00000569924 NT5DC4Q86YG4 428 aa4.62□□□□□ -1.67
CNOT1-221ENST00000569924 TMEM87AQ8NBN3 555 aa4.62□□□□□ -1.67
CNOT1-221ENST00000569924 TSEN2Q8NCE0 465 aaKnown RBP4.62□□□□□ -1.67
CNOT1-221ENST00000569924 LRCH3Q96II8 777 aa4.62□□□□□ -1.67
CNOT1-221ENST00000569924 TANGO6Q9C0B7 1094 aa4.62□□□□□ -1.67
CNOT1-221ENST00000569924 CUEDC1Q9NWM3 386 aaPredicted RBP4.62□□□□□ -1.67
CNOT1-221ENST00000569924 ZNF335Q9H4Z2 1342 aaPredicted RBP4.62□□□□□ -1.67
CNOT1-221ENST00000569924 DHX29Q7Z478 1369 aaKnown RBP4.62□□□□□ -1.67
CNOT1-221ENST00000569924 TIAM1Q13009 1591 aa4.61□□□□□ -1.67
CNOT1-221ENST00000569924 DNMT1P26358 1616 aaKnown RBP4.61□□□□□ -1.67
CNOT1-221ENST00000569924 ANKRD62A6NC57 917 aa4.61□□□□□ -1.67
CNOT1-221ENST00000569924 FOXO3O43524 673 aa4.61□□□□□ -1.67
CNOT1-221ENST00000569924 NDUFB5O43674 189 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms