RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 POLRMTO00411 1230 aaKnown RBP18.64■□□□□ 0.57
GTF3C1-211ENST00000569653 KCNQ3O43525 872 aa18.64■□□□□ 0.57
GTF3C1-211ENST00000569653 TGFB2P61812 414 aa18.64■□□□□ 0.57
GTF3C1-211ENST00000569653 ZNF496Q96IT1 587 aaPredicted RBP18.64■□□□□ 0.57
GTF3C1-211ENST00000569653 PARP3Q9Y6F1 533 aa18.64■□□□□ 0.57
GTF3C1-211ENST00000569653 DLG5Q8TDM6 1919 aa18.63■□□□□ 0.57
GTF3C1-211ENST00000569653 GNAT3A8MTJ3 354 aa18.63■□□□□ 0.57
GTF3C1-211ENST00000569653 GIGYF1O75420 1035 aaPredicted RBP18.63■□□□□ 0.57
GTF3C1-211ENST00000569653 VSIG10Q8N0Z9 540 aa18.63■□□□□ 0.57
GTF3C1-211ENST00000569653 GAS2L2Q8NHY3 880 aa18.63■□□□□ 0.57
GTF3C1-211ENST00000569653 DLEC1Q9Y238 1755 aa18.63■□□□□ 0.57
GTF3C1-211ENST00000569653 HEG1Q9ULI3 1381 aa18.62■□□□□ 0.57
GTF3C1-211ENST00000569653 ANKRD31Q8N7Z5 1873 aa18.62■□□□□ 0.57
GTF3C1-211ENST00000569653 NFIXQ14938 502 aa18.61■□□□□ 0.57
GTF3C1-211ENST00000569653 ZNF790Q6PG37 636 aa18.61■□□□□ 0.57
GTF3C1-211ENST00000569653 ZNF526Q8TF50 670 aaPredicted RBP18.61■□□□□ 0.57
GTF3C1-211ENST00000569653 NARFQ9UHQ1 456 aa18.61■□□□□ 0.57
GTF3C1-211ENST00000569653 BCS1LQ9Y276 419 aa18.61■□□□□ 0.57
GTF3C1-211ENST00000569653 CANXP27824 592 aaKnown RBP18.6■□□□□ 0.57
GTF3C1-211ENST00000569653 CHRNA5P30532 468 aa18.6■□□□□ 0.57
GTF3C1-211ENST00000569653 SBF1O95248 1867 aa18.6■□□□□ 0.57
GTF3C1-211ENST00000569653 CARMIL3Q8ND23 1372 aa18.59■□□□□ 0.57
GTF3C1-211ENST00000569653 EIF5P55010 431 aaKnown RBP18.59■□□□□ 0.57
GTF3C1-211ENST00000569653 BCORQ6W2J9 1755 aa18.59■□□□□ 0.57
GTF3C1-211ENST00000569653 SENP3-EIF4A1A0A087X0R7 540 aa18.58■□□□□ 0.56
GTF3C1-211ENST00000569653 TEFQ10587 303 aa18.58■□□□□ 0.56
GTF3C1-211ENST00000569653 CFAP53Q96M91 514 aa18.58■□□□□ 0.56
GTF3C1-211ENST00000569653 COL11A2P13942 1736 aaPredicted RBP18.57■□□□□ 0.56
GTF3C1-211ENST00000569653 ZPR1O75312 459 aa18.57■□□□□ 0.56
GTF3C1-211ENST00000569653 U2AF1L5P0DN76 240 aaPredicted RBP18.57■□□□□ 0.56
GTF3C1-211ENST00000569653 U2AF1Q01081 240 aaKnown RBP eCLIP18.57■□□□□ 0.56
GTF3C1-211ENST00000569653 TTC5Q8N0Z6 440 aa18.57■□□□□ 0.56
GTF3C1-211ENST00000569653 PRAMEF22A3QJZ6 481 aa18.56■□□□□ 0.56
GTF3C1-211ENST00000569653 FCHSD2O94868 740 aa18.56■□□□□ 0.56
GTF3C1-211ENST00000569653 DCTN1Q14203 1278 aa18.56■□□□□ 0.56
GTF3C1-211ENST00000569653 MCM10Q7L590 875 aa18.56■□□□□ 0.56
GTF3C1-211ENST00000569653 ARHGAP27Q6ZUM4 889 aa18.55■□□□□ 0.56
GTF3C1-211ENST00000569653 GPBP1L1Q9HC44 474 aaPredicted RBP18.55■□□□□ 0.56
GTF3C1-211ENST00000569653 A1BGP04217 495 aa18.54■□□□□ 0.56
GTF3C1-211ENST00000569653 KDM3BQ7LBC6 1761 aa18.53■□□□□ 0.56
GTF3C1-211ENST00000569653 KIF3CO14782 793 aa18.53■□□□□ 0.56
GTF3C1-211ENST00000569653 STARD3NLO95772 234 aa18.53■□□□□ 0.56
GTF3C1-211ENST00000569653 PIP4K2AP48426 406 aaPredicted RBP18.53■□□□□ 0.56
GTF3C1-211ENST00000569653 PIM2Q9P1W9 311 aa18.53■□□□□ 0.56
GTF3C1-211ENST00000569653 NUDCQ9Y266 331 aa18.53■□□□□ 0.56
GTF3C1-211ENST00000569653 BTBD11A6QL63 1104 aa18.52■□□□□ 0.56
GTF3C1-211ENST00000569653 SERPINB2P05120 415 aa18.52■□□□□ 0.56
GTF3C1-211ENST00000569653 TBC1D9BQ66K14 1250 aa18.52■□□□□ 0.56
GTF3C1-211ENST00000569653 FMNL2Q96PY5 1086 aa18.52■□□□□ 0.56
GTF3C1-211ENST00000569653 TBC1D2BQ9UPU7 963 aa18.52■□□□□ 0.56
GTF3C1-211ENST00000569653 USP16Q9Y5T5 823 aa18.52■□□□□ 0.56
GTF3C1-211ENST00000569653 LAMB4A4D0S4 1761 aa18.52■□□□□ 0.55
GTF3C1-211ENST00000569653 CCDC88AQ3V6T2 1871 aa18.52■□□□□ 0.55
GTF3C1-211ENST00000569653 DALRD3Q5D0E6 543 aaKnown RBP18.51■□□□□ 0.55
GTF3C1-211ENST00000569653 BICDL1Q6ZP65 573 aa18.51■□□□□ 0.55
GTF3C1-211ENST00000569653 CAMTA2O94983 1202 aa18.5■□□□□ 0.55
GTF3C1-211ENST00000569653 IL6STP40189 918 aaPredicted RBP18.5■□□□□ 0.55
GTF3C1-211ENST00000569653 PRELPP51888 382 aa18.5■□□□□ 0.55
GTF3C1-211ENST00000569653 CACNA1SQ13698 1873 aa18.5■□□□□ 0.55
GTF3C1-211ENST00000569653 C9orf131Q5VYM1 1079 aa18.49■□□□□ 0.55
GTF3C1-211ENST00000569653 CCDC24Q8N4L8 307 aa18.49■□□□□ 0.55
GTF3C1-211ENST00000569653 PLEKHF1Q96S99 279 aa18.49■□□□□ 0.55
GTF3C1-211ENST00000569653 ZNF330Q9Y3S2 320 aaPredicted RBP18.49■□□□□ 0.55
GTF3C1-211ENST00000569653 TEX13AQ9BXU3 409 aaPredicted RBP18.48■□□□□ 0.55
GTF3C1-211ENST00000569653 NBPF26B4DH59 902 aa18.47■□□□□ 0.55
GTF3C1-211ENST00000569653 RASSF7Q02833 373 aa18.47■□□□□ 0.55
GTF3C1-211ENST00000569653 NBPF10Q6P3W6 841 aaKnown RBP18.47■□□□□ 0.55
GTF3C1-211ENST00000569653 NBPF15Q8N660 670 aa18.47■□□□□ 0.55
GTF3C1-211ENST00000569653 NMRK2Q9NPI5 230 aa18.47■□□□□ 0.55
GTF3C1-211ENST00000569653 MIS18AQ9NYP9 233 aa18.47■□□□□ 0.55
GTF3C1-211ENST00000569653 A0A087WZG4 1122 aa18.46■□□□□ 0.55
GTF3C1-211ENST00000569653 PRR5LQ6MZQ0 368 aa18.46■□□□□ 0.55
GTF3C1-211ENST00000569653 THUMPD2Q9BTF0 503 aaKnown RBP18.46■□□□□ 0.55
GTF3C1-211ENST00000569653 TIAM2Q8IVF5 1701 aa18.46■□□□□ 0.55
GTF3C1-211ENST00000569653 SLX4Q8IY92 1834 aa18.45■□□□□ 0.54
GTF3C1-211ENST00000569653 C2CD5Q86YS7 1000 aa18.45■□□□□ 0.54
GTF3C1-211ENST00000569653 RTF1Q92541 710 aaKnown RBP18.45■□□□□ 0.54
GTF3C1-211ENST00000569653 FER1L6Q2WGJ9 1857 aa18.45■□□□□ 0.54
GTF3C1-211ENST00000569653 ARFGEF2Q9Y6D5 1785 aa18.45■□□□□ 0.54
GTF3C1-211ENST00000569653 HTATSF1O43719 755 aaKnown RBP18.44■□□□□ 0.54
GTF3C1-211ENST00000569653 SNRPA1P09661 255 aaKnown RBP18.43■□□□□ 0.54
GTF3C1-211ENST00000569653 DZIP3Q86Y13 1208 aaKnown RBP18.43■□□□□ 0.54
GTF3C1-211ENST00000569653 RNF181Q9P0P0 153 aa18.43■□□□□ 0.54
GTF3C1-211ENST00000569653 NFKBIEO00221 500 aa18.42■□□□□ 0.54
GTF3C1-211ENST00000569653 TAF7Q15545 349 aaPredicted RBP18.42■□□□□ 0.54
GTF3C1-211ENST00000569653 NUP98P52948 1817 aa18.42■□□□□ 0.54
GTF3C1-211ENST00000569653 TNRC6CQ9HCJ0 1690 aaKnown RBP18.41■□□□□ 0.54
GTF3C1-211ENST00000569653 DICER1Q9UPY3 1922 aaKnown RBP18.41■□□□□ 0.54
GTF3C1-211ENST00000569653 NFE2L2Q16236 605 aa18.41■□□□□ 0.54
GTF3C1-211ENST00000569653 HSPA6P17066 643 aa18.4■□□□□ 0.54
GTF3C1-211ENST00000569653 TTLL6Q8N841 843 aa18.4■□□□□ 0.54
GTF3C1-211ENST00000569653 BRIP1Q9BX63 1249 aa18.4■□□□□ 0.54
GTF3C1-211ENST00000569653 H0YIN7 160 aa18.39■□□□□ 0.53
GTF3C1-211ENST00000569653 EIF4A1P60842 406 aaKnown RBP18.37■□□□□ 0.53
GTF3C1-211ENST00000569653 HLFQ16534 295 aa18.37■□□□□ 0.53
GTF3C1-211ENST00000569653 CNBD1Q8NA66 436 aa18.37■□□□□ 0.53
GTF3C1-211ENST00000569653 SETDB2Q96T68 719 aa18.37■□□□□ 0.53
GTF3C1-211ENST00000569653 DDX10Q13206 875 aaKnown RBP18.36■□□□□ 0.53
GTF3C1-211ENST00000569653 ZNF622Q969S3 477 aaKnown RBP eCLIP18.36■□□□□ 0.534e-7■■■□□ 17.7
GTF3C1-211ENST00000569653 ZNF219Q9P2Y4 722 aaPredicted RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms