RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 ZPR1O75312 459 aa25.33■■□□□ 1.65
SPSB3-210ENST00000568416 ZNF790Q6PG37 636 aa25.33■■□□□ 1.65
SPSB3-210ENST00000568416 ZNF496Q96IT1 587 aaPredicted RBP25.33■■□□□ 1.65
SPSB3-210ENST00000568416 NARFQ9UHQ1 456 aa25.33■■□□□ 1.65
SPSB3-210ENST00000568416 N4BP2Q86UW6 1770 aaPredicted RBP25.32■■□□□ 1.64
SPSB3-210ENST00000568416 POLRMTO00411 1230 aaKnown RBP25.32■■□□□ 1.64
SPSB3-210ENST00000568416 HEG1Q9ULI3 1381 aa25.31■■□□□ 1.64
SPSB3-210ENST00000568416 U2AF1L5P0DN76 240 aaPredicted RBP25.31■■□□□ 1.64
SPSB3-210ENST00000568416 KCNA3P22001 575 aa25.31■■□□□ 1.64
SPSB3-210ENST00000568416 U2AF1Q01081 240 aaKnown RBP eCLIP25.31■■□□□ 1.64
SPSB3-210ENST00000568416 BCS1LQ9Y276 419 aa25.31■■□□□ 1.64
SPSB3-210ENST00000568416 SIPA1L3O60292 1781 aaPredicted RBP25.31■■□□□ 1.64
SPSB3-210ENST00000568416 FCHSD2O94868 740 aa25.29■■□□□ 1.64
SPSB3-210ENST00000568416 STARD3NLO95772 234 aa25.29■■□□□ 1.64
SPSB3-210ENST00000568416 BCL2L12Q9HB09 334 aa25.29■■□□□ 1.64
SPSB3-210ENST00000568416 CANXP27824 592 aaKnown RBP25.28■■□□□ 1.64
SPSB3-210ENST00000568416 TEX13AQ9BXU3 409 aaPredicted RBP25.28■■□□□ 1.64
SPSB3-210ENST00000568416 EIF5P55010 431 aaKnown RBP25.27■■□□□ 1.64
SPSB3-210ENST00000568416 NFIXQ14938 502 aa25.26■■□□□ 1.63
SPSB3-210ENST00000568416 FMNL2Q96PY5 1086 aa25.26■■□□□ 1.63
SPSB3-210ENST00000568416 BTBD11A6QL63 1104 aa25.25■■□□□ 1.63
SPSB3-210ENST00000568416 KCNQ3O43525 872 aa25.24■■□□□ 1.63
SPSB3-210ENST00000568416 GPBP1L1Q9HC44 474 aaPredicted RBP25.24■■□□□ 1.63
SPSB3-210ENST00000568416 PIM2Q9P1W9 311 aa25.24■■□□□ 1.63
SPSB3-210ENST00000568416 BRCA1P38398 1863 aaKnown RBP25.23■■□□□ 1.63
SPSB3-210ENST00000568416 A0A087WZG4 1122 aa25.23■■□□□ 1.63
SPSB3-210ENST00000568416 CHRNA5P30532 468 aa25.22■■□□□ 1.63
SPSB3-210ENST00000568416 ARHGAP27Q6ZUM4 889 aa25.22■■□□□ 1.63
SPSB3-210ENST00000568416 MCM10Q7L590 875 aa25.22■■□□□ 1.63
SPSB3-210ENST00000568416 RTF1Q92541 710 aaKnown RBP25.22■■□□□ 1.63
SPSB3-210ENST00000568416 NRXN2Q9P2S2 1712 aa25.21■■□□□ 1.63
SPSB3-210ENST00000568416 SENP3-EIF4A1A0A087X0R7 540 aa25.21■■□□□ 1.63
SPSB3-210ENST00000568416 HTATSF1O43719 755 aaKnown RBP25.21■■□□□ 1.63
SPSB3-210ENST00000568416 ZNF526Q8TF50 670 aaPredicted RBP25.21■■□□□ 1.63
SPSB3-210ENST00000568416 SERPINB2P05120 415 aa25.2■■□□□ 1.62
SPSB3-210ENST00000568416 IL6STP40189 918 aaPredicted RBP25.2■■□□□ 1.62
SPSB3-210ENST00000568416 A1BGP04217 495 aa25.19■■□□□ 1.62
SPSB3-210ENST00000568416 DALRD3Q5D0E6 543 aaKnown RBP25.19■■□□□ 1.62
SPSB3-210ENST00000568416 DCTN1Q14203 1278 aa25.18■■□□□ 1.62
SPSB3-210ENST00000568416 USP16Q9Y5T5 823 aa25.17■■□□□ 1.62
SPSB3-210ENST00000568416 TBC1D2BQ9UPU7 963 aa25.16■■□□□ 1.62
SPSB3-210ENST00000568416 ZNF330Q9Y3S2 320 aaPredicted RBP25.16■■□□□ 1.62
SPSB3-210ENST00000568416 ARFGEF1Q9Y6D6 1849 aa25.16■■□□□ 1.62
SPSB3-210ENST00000568416 SCN7AQ01118 1682 aa25.16■■□□□ 1.62
SPSB3-210ENST00000568416 AFDNP55196 1824 aaKnown RBP25.15■■□□□ 1.62
SPSB3-210ENST00000568416 TBC1D9BQ66K14 1250 aa25.15■■□□□ 1.62
SPSB3-210ENST00000568416 BICDL1Q6ZP65 573 aa25.15■■□□□ 1.62
SPSB3-210ENST00000568416 PRAMEF22A3QJZ6 481 aa25.14■■□□□ 1.62
SPSB3-210ENST00000568416 PLEKHF1Q96S99 279 aa25.14■■□□□ 1.62
SPSB3-210ENST00000568416 CARMIL3Q8ND23 1372 aa25.14■■□□□ 1.61
SPSB3-210ENST00000568416 SNRPA1P09661 255 aaKnown RBP25.13■■□□□ 1.61
SPSB3-210ENST00000568416 KIF3CO14782 793 aa25.12■■□□□ 1.61
SPSB3-210ENST00000568416 CAMTA2O94983 1202 aa25.12■■□□□ 1.61
SPSB3-210ENST00000568416 TAF7Q15545 349 aaPredicted RBP25.12■■□□□ 1.61
SPSB3-210ENST00000568416 NEFMP07197 916 aa25.11■■□□□ 1.61
SPSB3-210ENST00000568416 C9orf131Q5VYM1 1079 aa25.11■■□□□ 1.61
SPSB3-210ENST00000568416 NPM2Q86SE8 214 aaKnown RBP25.11■■□□□ 1.61
SPSB3-210ENST00000568416 PIP4K2AP48426 406 aaPredicted RBP25.09■■□□□ 1.61
SPSB3-210ENST00000568416 DZIP3Q86Y13 1208 aaKnown RBP25.09■■□□□ 1.61
SPSB3-210ENST00000568416 C2CD5Q86YS7 1000 aa25.09■■□□□ 1.61
SPSB3-210ENST00000568416 NFE2L2Q16236 605 aa25.08■■□□□ 1.61
SPSB3-210ENST00000568416 PRR5LQ6MZQ0 368 aa25.08■■□□□ 1.61
SPSB3-210ENST00000568416 H0YIN7 160 aa25.07■■□□□ 1.6
SPSB3-210ENST00000568416 RALBP1Q15311 655 aa25.07■■□□□ 1.6
SPSB3-210ENST00000568416 MIS18AQ9NYP9 233 aa25.07■■□□□ 1.6
SPSB3-210ENST00000568416 DLEC1Q9Y238 1755 aa25.07■■□□□ 1.6
SPSB3-210ENST00000568416 BCORQ6W2J9 1755 aa25.06■■□□□ 1.6
SPSB3-210ENST00000568416 NBPF26B4DH59 902 aa25.06■■□□□ 1.6
SPSB3-210ENST00000568416 NBPF10Q6P3W6 841 aaKnown RBP25.06■■□□□ 1.6
SPSB3-210ENST00000568416 NBPF15Q8N660 670 aa25.06■■□□□ 1.6
SPSB3-210ENST00000568416 TTLL6Q8N841 843 aa25.06■■□□□ 1.6
SPSB3-210ENST00000568416 BRIP1Q9BX63 1249 aa25.06■■□□□ 1.6
SPSB3-210ENST00000568416 PNNQ9H307 717 aaKnown RBP25.06■■□□□ 1.6
SPSB3-210ENST00000568416 PNISRQ8TF01 805 aaKnown RBP25.05■■□□□ 1.6
SPSB3-210ENST00000568416 SETDB2Q96T68 719 aa25.05■■□□□ 1.6
SPSB3-210ENST00000568416 RNF181Q9P0P0 153 aa25.05■■□□□ 1.6
SPSB3-210ENST00000568416 PDZRN3Q9UPQ7 1066 aa25.05■■□□□ 1.6
SPSB3-210ENST00000568416 PDE6BP35913 854 aa25.04■■□□□ 1.6
SPSB3-210ENST00000568416 CLEC4GQ6UXB4 293 aa25.04■■□□□ 1.6
SPSB3-210ENST00000568416 CCDC24Q8N4L8 307 aa25.03■■□□□ 1.6
SPSB3-210ENST00000568416 MAPK8IP3Q9UPT6 1336 aa25.03■■□□□ 1.6
SPSB3-210ENST00000568416 RASSF7Q02833 373 aa25.02■■□□□ 1.6
SPSB3-210ENST00000568416 NMRK2Q9NPI5 230 aa25.02■■□□□ 1.6
SPSB3-210ENST00000568416 ANKRD31Q8N7Z5 1873 aa25.02■■□□□ 1.6
SPSB3-210ENST00000568416 RGL2O15211 777 aa25.01■■□□□ 1.59
SPSB3-210ENST00000568416 DDX10Q13206 875 aaKnown RBP25.01■■□□□ 1.59
SPSB3-210ENST00000568416 CNBD1Q8NA66 436 aa25.01■■□□□ 1.59
SPSB3-210ENST00000568416 THUMPD2Q9BTF0 503 aaKnown RBP25.01■■□□□ 1.59
SPSB3-210ENST00000568416 DLG5Q8TDM6 1919 aa25.01■■□□□ 1.59
SPSB3-210ENST00000568416 KDM3BQ7LBC6 1761 aa25■■□□□ 1.59
SPSB3-210ENST00000568416 HSPA6P17066 643 aa25■■□□□ 1.59
SPSB3-210ENST00000568416 ZNF652Q9Y2D9 606 aa25■■□□□ 1.59
SPSB3-210ENST00000568416 PRELPP51888 382 aa24.99■■□□□ 1.59
SPSB3-210ENST00000568416 EIF4A1P60842 406 aaKnown RBP24.99■■□□□ 1.59
SPSB3-210ENST00000568416 ZNF622Q969S3 477 aaKnown RBP eCLIP24.99■■□□□ 1.59
SPSB3-210ENST00000568416 TOMM70O94826 608 aa24.98■■□□□ 1.59
SPSB3-210ENST00000568416 ST5P78524 1137 aa24.98■■□□□ 1.59
SPSB3-210ENST00000568416 LAMB4A4D0S4 1761 aa24.98■■□□□ 1.59
SPSB3-210ENST00000568416 COL11A2P13942 1736 aaPredicted RBP24.98■■□□□ 1.59
SPSB3-210ENST00000568416 MYBBP1AQ9BQG0 1328 aaKnown RBP24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms