RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 DCTN1Q14203 1278 aa21.83■■□□□ 1.09
CLN6-208ENST00000567060 ATG3Q9NT62 314 aa21.83■■□□□ 1.09
CLN6-208ENST00000567060 BTBD11A6QL63 1104 aa21.82■■□□□ 1.08
CLN6-208ENST00000567060 ITPK1Q13572 414 aa21.82■■□□□ 1.08
CLN6-208ENST00000567060 ASAP1Q9ULH1 1129 aa21.82■■□□□ 1.08
CLN6-208ENST00000567060 WWC1Q8IX03 1113 aa21.81■■□□□ 1.08
CLN6-208ENST00000567060 TTC5Q8N0Z6 440 aa21.81■■□□□ 1.08
CLN6-208ENST00000567060 IL16Q14005 1332 aa21.8■■□□□ 1.08
CLN6-208ENST00000567060 ZNF790Q6PG37 636 aa21.8■■□□□ 1.08
CLN6-208ENST00000567060 WDR63Q8IWG1 891 aa21.8■■□□□ 1.08
CLN6-208ENST00000567060 UBR2Q8IWV8 1755 aa21.79■■□□□ 1.08
CLN6-208ENST00000567060 VSIG10Q8N0Z9 540 aa21.79■■□□□ 1.08
CLN6-208ENST00000567060 CFAP44Q96MT7 982 aa21.79■■□□□ 1.08
CLN6-208ENST00000567060 IFT57Q9NWB7 429 aa21.79■■□□□ 1.08
CLN6-208ENST00000567060 CICQ96RK0 1608 aaPredicted RBP21.79■■□□□ 1.08
CLN6-208ENST00000567060 GNAI1P63096 354 aa21.78■■□□□ 1.08
CLN6-208ENST00000567060 KDM3BQ7LBC6 1761 aa21.77■■□□□ 1.08
CLN6-208ENST00000567060 GNPATO15228 680 aa21.77■■□□□ 1.08
CLN6-208ENST00000567060 THUMPD2Q9BTF0 503 aaKnown RBP21.77■■□□□ 1.08
CLN6-208ENST00000567060 CHL1O00533 1208 aa21.76■■□□□ 1.07
CLN6-208ENST00000567060 MMP10P09238 476 aa21.76■■□□□ 1.07
CLN6-208ENST00000567060 ATP6V1AP38606 617 aa21.76■■□□□ 1.07
CLN6-208ENST00000567060 KCPQ6ZWJ8 1503 aa21.75■■□□□ 1.07
CLN6-208ENST00000567060 FMNL2Q96PY5 1086 aa21.75■■□□□ 1.07
CLN6-208ENST00000567060 TEX13AQ9BXU3 409 aaPredicted RBP21.75■■□□□ 1.07
CLN6-208ENST00000567060 ZNF521Q96K83 1311 aa21.75■■□□□ 1.07
CLN6-208ENST00000567060 ZNF853P0CG23 659 aa21.74■■□□□ 1.07
CLN6-208ENST00000567060 SLC39A6Q13433 755 aa21.74■■□□□ 1.07
CLN6-208ENST00000567060 TSPYL4Q9UJ04 414 aa21.74■■□□□ 1.07
CLN6-208ENST00000567060 PXDNLA1KZ92 1463 aa21.73■■□□□ 1.07
CLN6-208ENST00000567060 A0A0G2JLW4 131 aa21.73■■□□□ 1.07
CLN6-208ENST00000567060 DNAJC5GQ8N7S2 189 aa21.73■■□□□ 1.07
CLN6-208ENST00000567060 SLC4A9Q96Q91 983 aa21.73■■□□□ 1.07
CLN6-208ENST00000567060 HEG1Q9ULI3 1381 aa21.73■■□□□ 1.07
CLN6-208ENST00000567060 TGFB2P61812 414 aa21.72■■□□□ 1.07
CLN6-208ENST00000567060 RBM42Q9BTD8 480 aaKnown RBP21.72■■□□□ 1.07
CLN6-208ENST00000567060 ZNF496Q96IT1 587 aaPredicted RBP21.71■■□□□ 1.07
CLN6-208ENST00000567060 KIAA1551Q9HCM1 1747 aa21.71■■□□□ 1.07
CLN6-208ENST00000567060 PTCD1O75127 700 aaKnown RBP21.7■■□□□ 1.06
CLN6-208ENST00000567060 TRAPPC3LQ5T215 181 aa21.7■■□□□ 1.06
CLN6-208ENST00000567060 BCS1LQ9Y276 419 aa21.7■■□□□ 1.06
CLN6-208ENST00000567060 SOS1Q07889 1333 aaPredicted RBP21.7■■□□□ 1.06
CLN6-208ENST00000567060 KIF13BQ9NQT8 1826 aa21.69■■□□□ 1.06
CLN6-208ENST00000567060 TOMM70O94826 608 aa21.69■■□□□ 1.06
CLN6-208ENST00000567060 SNRPA1P09661 255 aaKnown RBP21.69■■□□□ 1.06
CLN6-208ENST00000567060 APLP1P51693 650 aa21.69■■□□□ 1.06
CLN6-208ENST00000567060 EIF4A1P60842 406 aaKnown RBP21.69■■□□□ 1.06
CLN6-208ENST00000567060 NLGN1Q8N2Q7 840 aa21.69■■□□□ 1.06
CLN6-208ENST00000567060 CHMP4AQ9BY43 222 aa21.69■■□□□ 1.06
CLN6-208ENST00000567060 MYH16Q9H6N6 1097 aa21.69■■□□□ 1.06
CLN6-208ENST00000567060 HOXB7P09629 217 aa21.68■■□□□ 1.06
CLN6-208ENST00000567060 GOLGA2Q08379 1002 aa21.68■■□□□ 1.06
CLN6-208ENST00000567060 RC3H1Q5TC82 1133 aaKnown RBP21.68■■□□□ 1.06
CLN6-208ENST00000567060 ARHGEF1Q92888 912 aaKnown RBP21.68■■□□□ 1.06
CLN6-208ENST00000567060 RTCBQ9Y3I0 505 aaKnown RBP21.68■■□□□ 1.06
CLN6-208ENST00000567060 SALL2Q9Y467 1007 aaPredicted RBP21.68■■□□□ 1.06
CLN6-208ENST00000567060 N4BP2Q86UW6 1770 aaPredicted RBP21.68■■□□□ 1.06
CLN6-208ENST00000567060 COL5A3P25940 1745 aaPredicted RBP21.67■■□□□ 1.06
CLN6-208ENST00000567060 CNTNAP4Q9C0A0 1308 aa21.67■■□□□ 1.06
CLN6-208ENST00000567060 STARD3NLO95772 234 aa21.67■■□□□ 1.06
CLN6-208ENST00000567060 GYS1P13807 737 aa21.67■■□□□ 1.06
CLN6-208ENST00000567060 DPEP1P16444 411 aa21.67■■□□□ 1.06
CLN6-208ENST00000567060 HNRNPUQ00839 825 aaKnown RBP eCLIP21.67■■□□□ 1.06
CLN6-208ENST00000567060 ARHGAP27Q6ZUM4 889 aa21.67■■□□□ 1.06
CLN6-208ENST00000567060 NMRK2Q9NPI5 230 aa21.67■■□□□ 1.06
CLN6-208ENST00000567060 MBIPQ9NS73 344 aa21.67■■□□□ 1.06
CLN6-208ENST00000567060 MIS18AQ9NYP9 233 aa21.67■■□□□ 1.06
CLN6-208ENST00000567060 LAS1LQ9Y4W2 734 aaKnown RBP21.67■■□□□ 1.06
CLN6-208ENST00000567060 TJP1Q07157 1748 aa21.66■■□□□ 1.06
CLN6-208ENST00000567060 PCNTO95613 3336 aa21.66■■□□□ 1.06
CLN6-208ENST00000567060 E9PSI1 815 aa21.66■■□□□ 1.06
CLN6-208ENST00000567060 KCNQ3O43525 872 aa21.66■■□□□ 1.06
CLN6-208ENST00000567060 KCNA3P22001 575 aa21.66■■□□□ 1.06
CLN6-208ENST00000567060 C10orf71Q711Q0 1435 aa21.65■■□□□ 1.06
CLN6-208ENST00000567060 ZBED9Q6R2W3 1325 aa21.65■■□□□ 1.06
CLN6-208ENST00000567060 LAMB4A4D0S4 1761 aa21.64■■□□□ 1.05
CLN6-208ENST00000567060 RPS6KA4O75676 772 aa21.63■■□□□ 1.05
CLN6-208ENST00000567060 ERBB4Q15303 1308 aa21.62■■□□□ 1.05
CLN6-208ENST00000567060 ADRA2BP18089 450 aa21.62■■□□□ 1.05
CLN6-208ENST00000567060 DNAJC10Q8IXB1 793 aa21.62■■□□□ 1.05
CLN6-208ENST00000567060 CCDC87Q9NVE4 849 aa21.62■■□□□ 1.05
CLN6-208ENST00000567060 CYP19A1P11511 503 aaPredicted RBP21.61■■□□□ 1.05
CLN6-208ENST00000567060 FANCIQ9NVI1 1328 aa21.6■■□□□ 1.05
CLN6-208ENST00000567060 RFC4P35249 363 aa21.6■■□□□ 1.05
CLN6-208ENST00000567060 C4AP0C0L4 1744 aa21.59■■□□□ 1.05
CLN6-208ENST00000567060 CRKLP46109 303 aaKnown RBP21.59■■□□□ 1.05
CLN6-208ENST00000567060 SLFN5Q08AF3 891 aa21.59■■□□□ 1.05
CLN6-208ENST00000567060 C9orf131Q5VYM1 1079 aa21.59■■□□□ 1.05
CLN6-208ENST00000567060 PARP3Q9Y6F1 533 aa21.59■■□□□ 1.05
CLN6-208ENST00000567060 MYH14Q7Z406 1995 aaKnown RBP21.59■■□□□ 1.05
CLN6-208ENST00000567060 BRCA1P38398 1863 aaKnown RBP21.58■■□□□ 1.05
CLN6-208ENST00000567060 HTRA3P83110 453 aa21.58■■□□□ 1.05
CLN6-208ENST00000567060 TRMT2AQ8IZ69 625 aaKnown RBP21.57■■□□□ 1.04
CLN6-208ENST00000567060 RBM46Q8TBY0 533 aaKnown RBP21.57■■□□□ 1.04
CLN6-208ENST00000567060 USP16Q9Y5T5 823 aa21.57■■□□□ 1.04
CLN6-208ENST00000567060 DUSP27Q5VZP5 1158 aa21.56■■□□□ 1.04
CLN6-208ENST00000567060 INTS5Q6P9B9 1019 aaKnown RBP21.56■■□□□ 1.04
CLN6-208ENST00000567060 TSR2Q969E8 191 aaKnown RBP21.56■■□□□ 1.04
CLN6-208ENST00000567060 PIM2Q9P1W9 311 aa21.56■■□□□ 1.04
CLN6-208ENST00000567060 SRP68Q9UHB9 627 aaKnown RBP21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms