RNA–Protein interactions for RNA: ENST00000566914.1

KIFC3-227, Transcript of kinesin family member C3, humanhuman

TSL 3

Gene KIFC3, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIFC3-227ENST00000566914 DDR1Q08345 913 aa29.65■■■□□ 2.34
KIFC3-227ENST00000566914 FCHSD2O94868 740 aa29.64■■■□□ 2.34
KIFC3-227ENST00000566914 MCM10Q7L590 875 aa29.64■■■□□ 2.34
KIFC3-227ENST00000566914 HEG1Q9ULI3 1381 aa29.64■■■□□ 2.33
KIFC3-227ENST00000566914 KCNQ3O43525 872 aa29.63■■■□□ 2.33
KIFC3-227ENST00000566914 DLG5Q8TDM6 1919 aa29.63■■■□□ 2.33
KIFC3-227ENST00000566914 BTBD11A6QL63 1104 aa29.62■■■□□ 2.33
KIFC3-227ENST00000566914 DCTN1Q14203 1278 aa29.62■■■□□ 2.33
KIFC3-227ENST00000566914 RTF1Q92541 710 aaKnown RBP29.62■■■□□ 2.33
KIFC3-227ENST00000566914 DPEP1P16444 411 aa29.61■■■□□ 2.33
KIFC3-227ENST00000566914 ZNF330Q9Y3S2 320 aaPredicted RBP29.61■■■□□ 2.33
KIFC3-227ENST00000566914 AFDNP55196 1824 aaKnown RBP29.61■■■□□ 2.33
KIFC3-227ENST00000566914 BRCA1P38398 1863 aaKnown RBP29.61■■■□□ 2.33
KIFC3-227ENST00000566914 STARD3NLO95772 234 aa29.6■■■□□ 2.33
KIFC3-227ENST00000566914 TGFB2P61812 414 aa29.6■■■□□ 2.33
KIFC3-227ENST00000566914 FMNL2Q96PY5 1086 aa29.59■■■□□ 2.33
KIFC3-227ENST00000566914 NARFQ9UHQ1 456 aa29.59■■■□□ 2.33
KIFC3-227ENST00000566914 BCS1LQ9Y276 419 aa29.59■■■□□ 2.33
KIFC3-227ENST00000566914 POLRMTO00411 1230 aaKnown RBP29.57■■■□□ 2.32
KIFC3-227ENST00000566914 DDX10Q13206 875 aaKnown RBP29.57■■■□□ 2.32
KIFC3-227ENST00000566914 TM4SF1P30408 202 aa29.56■■■□□ 2.32
KIFC3-227ENST00000566914 ATP10DQ9P241 1426 aa29.55■■■□□ 2.32
KIFC3-227ENST00000566914 BCL2L12Q9HB09 334 aa29.55■■■□□ 2.32
KIFC3-227ENST00000566914 SCN7AQ01118 1682 aa29.54■■■□□ 2.32
KIFC3-227ENST00000566914 NFIXQ14938 502 aa29.54■■■□□ 2.32
KIFC3-227ENST00000566914 A1BGP04217 495 aa29.53■■■□□ 2.32
KIFC3-227ENST00000566914 NEFMP07197 916 aa29.53■■■□□ 2.32
KIFC3-227ENST00000566914 BICDL1Q6ZP65 573 aa29.53■■■□□ 2.32
KIFC3-227ENST00000566914 TEX13AQ9BXU3 409 aaPredicted RBP29.53■■■□□ 2.32
KIFC3-227ENST00000566914 PRAMEF22A3QJZ6 481 aa29.52■■■□□ 2.32
KIFC3-227ENST00000566914 EIF5P55010 431 aaKnown RBP29.52■■■□□ 2.32
KIFC3-227ENST00000566914 CHRNA5P30532 468 aa29.51■■■□□ 2.31
KIFC3-227ENST00000566914 PIP4K2AP48426 406 aaPredicted RBP29.51■■■□□ 2.31
KIFC3-227ENST00000566914 ZNF526Q8TF50 670 aaPredicted RBP29.51■■■□□ 2.31
KIFC3-227ENST00000566914 TBC1D2BQ9UPU7 963 aa29.51■■■□□ 2.31
KIFC3-227ENST00000566914 NRXN2Q9P2S2 1712 aa29.51■■■□□ 2.31
KIFC3-227ENST00000566914 ARFGEF1Q9Y6D6 1849 aa29.5■■■□□ 2.31
KIFC3-227ENST00000566914 KCNA3P22001 575 aa29.5■■■□□ 2.31
KIFC3-227ENST00000566914 A0A087WZG4 1122 aa29.49■■■□□ 2.31
KIFC3-227ENST00000566914 GIGYF1O75420 1035 aaPredicted RBP29.49■■■□□ 2.31
KIFC3-227ENST00000566914 MIS18AQ9NYP9 233 aa29.49■■■□□ 2.31
KIFC3-227ENST00000566914 HTATSF1O43719 755 aaKnown RBP29.48■■■□□ 2.31
KIFC3-227ENST00000566914 PLEKHF1Q96S99 279 aa29.48■■■□□ 2.31
KIFC3-227ENST00000566914 USP16Q9Y5T5 823 aa29.48■■■□□ 2.31
KIFC3-227ENST00000566914 ADCY9O60503 1353 aa29.48■■■□□ 2.31
KIFC3-227ENST00000566914 SERPINB2P05120 415 aa29.47■■■□□ 2.31
KIFC3-227ENST00000566914 RALBP1Q15311 655 aa29.47■■■□□ 2.31
KIFC3-227ENST00000566914 ARHGAP27Q6ZUM4 889 aa29.47■■■□□ 2.31
KIFC3-227ENST00000566914 BCORQ6W2J9 1755 aa29.47■■■□□ 2.31
KIFC3-227ENST00000566914 IL6STP40189 918 aaPredicted RBP29.46■■■□□ 2.31
KIFC3-227ENST00000566914 PIM2Q9P1W9 311 aa29.46■■■□□ 2.31
KIFC3-227ENST00000566914 MAPK8IP3Q9UPT6 1336 aa29.45■■■□□ 2.31
KIFC3-227ENST00000566914 KDM3BQ7LBC6 1761 aa29.45■■■□□ 2.31
KIFC3-227ENST00000566914 TBC1D9BQ66K14 1250 aa29.45■■■□□ 2.31
KIFC3-227ENST00000566914 NPM2Q86SE8 214 aaKnown RBP29.45■■■□□ 2.31
KIFC3-227ENST00000566914 THUMPD2Q9BTF0 503 aaKnown RBP29.45■■■□□ 2.31
KIFC3-227ENST00000566914 C1QTNF8P60827 252 aa29.44■■■□□ 2.3
KIFC3-227ENST00000566914 TAF7Q15545 349 aaPredicted RBP29.44■■■□□ 2.3
KIFC3-227ENST00000566914 NFE2L2Q16236 605 aa29.44■■■□□ 2.3
KIFC3-227ENST00000566914 CARMIL3Q8ND23 1372 aa29.43■■■□□ 2.3
KIFC3-227ENST00000566914 SNRPA1P09661 255 aaKnown RBP29.43■■■□□ 2.3
KIFC3-227ENST00000566914 DALRD3Q5D0E6 543 aaKnown RBP29.43■■■□□ 2.3
KIFC3-227ENST00000566914 LAMB4A4D0S4 1761 aa29.43■■■□□ 2.3
KIFC3-227ENST00000566914 DLEC1Q9Y238 1755 aa29.42■■■□□ 2.3
KIFC3-227ENST00000566914 GPBP1L1Q9HC44 474 aaPredicted RBP29.42■■■□□ 2.3
KIFC3-227ENST00000566914 ANKRD31Q8N7Z5 1873 aa29.4■■■□□ 2.3
KIFC3-227ENST00000566914 DZIP3Q86Y13 1208 aaKnown RBP29.4■■■□□ 2.3
KIFC3-227ENST00000566914 CCDC24Q8N4L8 307 aa29.4■■■□□ 2.3
KIFC3-227ENST00000566914 CAMTA2O94983 1202 aa29.39■■■□□ 2.3
KIFC3-227ENST00000566914 PNNQ9H307 717 aaKnown RBP29.39■■■□□ 2.3
KIFC3-227ENST00000566914 MYBBP1AQ9BQG0 1328 aaKnown RBP29.39■■■□□ 2.3
KIFC3-227ENST00000566914 C2CD5Q86YS7 1000 aa29.36■■■□□ 2.29
KIFC3-227ENST00000566914 COL11A2P13942 1736 aaPredicted RBP29.35■■■□□ 2.29
KIFC3-227ENST00000566914 SENP3-EIF4A1A0A087X0R7 540 aa29.35■■■□□ 2.29
KIFC3-227ENST00000566914 NBPF26B4DH59 902 aa29.35■■■□□ 2.29
KIFC3-227ENST00000566914 NBPF10Q6P3W6 841 aaKnown RBP29.35■■■□□ 2.29
KIFC3-227ENST00000566914 NBPF15Q8N660 670 aa29.35■■■□□ 2.29
KIFC3-227ENST00000566914 NPHP1O15259 732 aa29.33■■■□□ 2.29
KIFC3-227ENST00000566914 CCDC146Q8IYE0 955 aa29.33■■■□□ 2.29
KIFC3-227ENST00000566914 PNISRQ8TF01 805 aaKnown RBP29.33■■■□□ 2.29
KIFC3-227ENST00000566914 CACNA1SQ13698 1873 aa29.32■■■□□ 2.28
KIFC3-227ENST00000566914 C9orf131Q5VYM1 1079 aa29.32■■■□□ 2.28
KIFC3-227ENST00000566914 PRR5LQ6MZQ0 368 aa29.32■■■□□ 2.28
KIFC3-227ENST00000566914 SETDB2Q96T68 719 aa29.32■■■□□ 2.28
KIFC3-227ENST00000566914 RIPK4P57078 832 aa29.31■■■□□ 2.28
KIFC3-227ENST00000566914 RRP7AQ9Y3A4 280 aaKnown RBP29.31■■■□□ 2.28
KIFC3-227ENST00000566914 SBF1O95248 1867 aa29.31■■■□□ 2.28
KIFC3-227ENST00000566914 H0YIN7 160 aa29.3■■■□□ 2.28
KIFC3-227ENST00000566914 NGEFQ8N5V2 710 aa29.3■■■□□ 2.28
KIFC3-227ENST00000566914 EIF4A1P60842 406 aaKnown RBP29.29■■■□□ 2.28
KIFC3-227ENST00000566914 CNBD1Q8NA66 436 aa29.29■■■□□ 2.28
KIFC3-227ENST00000566914 RASSF7Q02833 373 aa29.28■■■□□ 2.28
KIFC3-227ENST00000566914 NEUROD2Q15784 382 aa29.28■■■□□ 2.28
KIFC3-227ENST00000566914 TTLL6Q8N841 843 aa29.27■■■□□ 2.28
KIFC3-227ENST00000566914 ZNF622Q969S3 477 aaKnown RBP eCLIP29.27■■■□□ 2.28
KIFC3-227ENST00000566914 RNF181Q9P0P0 153 aa29.27■■■□□ 2.28
KIFC3-227ENST00000566914 TMPOP42166 694 aaKnown RBP29.26■■■□□ 2.27
KIFC3-227ENST00000566914 WDR43Q15061 677 aaKnown RBP eCLIP29.26■■■□□ 2.27
KIFC3-227ENST00000566914 ZNF219Q9P2Y4 722 aaPredicted RBP29.26■■■□□ 2.27
KIFC3-227ENST00000566914 TSPYL4Q9UJ04 414 aa29.26■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms