RNA–Protein interactions for RNA: ENST00000566682.1

SPG7-215, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 756 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-215ENST00000566682 AMIGO3Q86WK7 504 aa17.98■□□□□ 0.47
SPG7-215ENST00000566682 FAM9BQ8IZU0 186 aa17.98■□□□□ 0.47
SPG7-215ENST00000566682 FMNL2Q96PY5 1086 aa17.98■□□□□ 0.47
SPG7-215ENST00000566682 HEG1Q9ULI3 1381 aa17.98■□□□□ 0.47
SPG7-215ENST00000566682 CNTNAP4Q9C0A0 1308 aa17.98■□□□□ 0.47
SPG7-215ENST00000566682 KDM3BQ7LBC6 1761 aa17.97■□□□□ 0.47
SPG7-215ENST00000566682 CRKLP46109 303 aaKnown RBP17.97■□□□□ 0.47
SPG7-215ENST00000566682 FLAD1Q8NFF5 587 aa17.97■□□□□ 0.47
SPG7-215ENST00000566682 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.96■□□□□ 0.47
SPG7-215ENST00000566682 PHF14O94880 888 aa17.96■□□□□ 0.47
SPG7-215ENST00000566682 CYP19A1P11511 503 aaPredicted RBP17.96■□□□□ 0.47
SPG7-215ENST00000566682 SLC16A10Q8TF71 515 aa17.96■□□□□ 0.47
SPG7-215ENST00000566682 SPON1Q9HCB6 807 aa17.96■□□□□ 0.47
SPG7-215ENST00000566682 ATF5Q9Y2D1 282 aaPredicted RBP17.96■□□□□ 0.47
SPG7-215ENST00000566682 RTCBQ9Y3I0 505 aaKnown RBP17.96■□□□□ 0.47
SPG7-215ENST00000566682 LRP5O75197 1615 aa17.96■□□□□ 0.47
SPG7-215ENST00000566682 RPS6KA4O75676 772 aa17.95■□□□□ 0.46
SPG7-215ENST00000566682 SSFA2P28290 1259 aa17.95■□□□□ 0.46
SPG7-215ENST00000566682 INTS5Q6P9B9 1019 aaKnown RBP17.95■□□□□ 0.46
SPG7-215ENST00000566682 MTFR1LQ9H019 292 aa17.95■□□□□ 0.46
SPG7-215ENST00000566682 SENP3-EIF4A1A0A087X0R7 540 aa17.94■□□□□ 0.46
SPG7-215ENST00000566682 TEX13AQ9BXU3 409 aaPredicted RBP17.94■□□□□ 0.46
SPG7-215ENST00000566682 STARD3NLO95772 234 aa17.93■□□□□ 0.46
SPG7-215ENST00000566682 TRAPPC3LQ5T215 181 aa17.93■□□□□ 0.46
SPG7-215ENST00000566682 CCDC87Q9NVE4 849 aa17.93■□□□□ 0.46
SPG7-215ENST00000566682 TSPYL4Q9UJ04 414 aa17.93■□□□□ 0.46
SPG7-215ENST00000566682 PRAMEF22A3QJZ6 481 aa17.92■□□□□ 0.46
SPG7-215ENST00000566682 CCER2I3L3R5 266 aa17.92■□□□□ 0.46
SPG7-215ENST00000566682 SNRPA1P09661 255 aaKnown RBP17.92■□□□□ 0.46
SPG7-215ENST00000566682 BABAM1Q9NWV8 329 aa17.92■□□□□ 0.46
SPG7-215ENST00000566682 USP16Q9Y5T5 823 aa17.92■□□□□ 0.46
SPG7-215ENST00000566682 PTGER2P43116 358 aa17.91■□□□□ 0.46
SPG7-215ENST00000566682 EIF4A1P60842 406 aaKnown RBP17.91■□□□□ 0.46
SPG7-215ENST00000566682 ARHGEF1Q92888 912 aaKnown RBP17.91■□□□□ 0.46
SPG7-215ENST00000566682 ZBTB1Q9Y2K1 713 aa17.91■□□□□ 0.46
SPG7-215ENST00000566682 LAS1LQ9Y4W2 734 aaKnown RBP17.91■□□□□ 0.46
SPG7-215ENST00000566682 COL24A1Q17RW2 1714 aa17.9■□□□□ 0.46
SPG7-215ENST00000566682 CHL1O00533 1208 aa17.9■□□□□ 0.46
SPG7-215ENST00000566682 C4AP0C0L4 1744 aa17.89■□□□□ 0.46
SPG7-215ENST00000566682 CANXP27824 592 aaKnown RBP17.89■□□□□ 0.45
SPG7-215ENST00000566682 MIER1Q8N108 512 aa17.89■□□□□ 0.45
SPG7-215ENST00000566682 SGIP1Q9BQI5 828 aa17.89■□□□□ 0.45
SPG7-215ENST00000566682 GIGYF1O75420 1035 aaPredicted RBP17.88■□□□□ 0.45
SPG7-215ENST00000566682 A1BGP04217 495 aa17.88■□□□□ 0.45
SPG7-215ENST00000566682 RFC4P35249 363 aa17.88■□□□□ 0.45
SPG7-215ENST00000566682 CCDC27Q2M243 656 aa17.88■□□□□ 0.45
SPG7-215ENST00000566682 MSL1Q68DK7 614 aa17.88■□□□□ 0.45
SPG7-215ENST00000566682 CFAP44Q96MT7 982 aa17.88■□□□□ 0.45
SPG7-215ENST00000566682 SOS1Q07889 1333 aaPredicted RBP17.88■□□□□ 0.45
SPG7-215ENST00000566682 CALD1Q05682 793 aaKnown RBP17.87■□□□□ 0.45
SPG7-215ENST00000566682 SALL2Q9Y467 1007 aaPredicted RBP17.87■□□□□ 0.45
SPG7-215ENST00000566682 LAMB4A4D0S4 1761 aa17.86■□□□□ 0.45
SPG7-215ENST00000566682 WWC1Q8IX03 1113 aa17.86■□□□□ 0.45
SPG7-215ENST00000566682 PPP1R1BQ9UD71 204 aaPredicted RBP17.86■□□□□ 0.45
SPG7-215ENST00000566682 ZNF853P0CG23 659 aa17.85■□□□□ 0.45
SPG7-215ENST00000566682 POLD1P28340 1107 aa17.85■□□□□ 0.45
SPG7-215ENST00000566682 COL15A1P39059 1388 aa17.85■□□□□ 0.45
SPG7-215ENST00000566682 EIF5P55010 431 aaKnown RBP17.85■□□□□ 0.45
SPG7-215ENST00000566682 IFT57Q9NWB7 429 aa17.85■□□□□ 0.45
SPG7-215ENST00000566682 IL6STP40189 918 aaPredicted RBP17.84■□□□□ 0.45
SPG7-215ENST00000566682 PIP4K2AP48426 406 aaPredicted RBP17.84■□□□□ 0.45
SPG7-215ENST00000566682 GNAI1P63096 354 aa17.84■□□□□ 0.45
SPG7-215ENST00000566682 MBIPQ9NS73 344 aa17.84■□□□□ 0.45
SPG7-215ENST00000566682 SRP68Q9UHB9 627 aaKnown RBP17.84■□□□□ 0.45
SPG7-215ENST00000566682 USP42Q9H9J4 1324 aaKnown RBP17.83■□□□□ 0.44
SPG7-215ENST00000566682 GYS1P13807 737 aa17.83■□□□□ 0.44
SPG7-215ENST00000566682 ARXQ96QS3 562 aa17.83■□□□□ 0.44
SPG7-215ENST00000566682 ZNF330Q9Y3S2 320 aaPredicted RBP17.83■□□□□ 0.44
SPG7-215ENST00000566682 KRT24Q2M2I5 525 aa17.82■□□□□ 0.44
SPG7-215ENST00000566682 NLGN1Q8N2Q7 840 aa17.82■□□□□ 0.44
SPG7-215ENST00000566682 NARFQ9UHQ1 456 aa17.82■□□□□ 0.44
SPG7-215ENST00000566682 A0A087WZG4 1122 aa17.81■□□□□ 0.44
SPG7-215ENST00000566682 NBPF26B4DH59 902 aa17.81■□□□□ 0.44
SPG7-215ENST00000566682 ZBTB22O15209 634 aa17.81■□□□□ 0.44
SPG7-215ENST00000566682 ZPR1O75312 459 aa17.81■□□□□ 0.44
SPG7-215ENST00000566682 USPL1Q5W0Q7 1092 aa17.81■□□□□ 0.44
SPG7-215ENST00000566682 NBPF10Q6P3W6 841 aaKnown RBP17.81■□□□□ 0.44
SPG7-215ENST00000566682 NPM2Q86SE8 214 aaKnown RBP17.81■□□□□ 0.44
SPG7-215ENST00000566682 NBPF15Q8N660 670 aa17.81■□□□□ 0.44
SPG7-215ENST00000566682 SRCAPQ6ZRS2 3230 aa17.81■□□□□ 0.44
SPG7-215ENST00000566682 EIF2S2P20042 333 aaKnown RBP17.8■□□□□ 0.44
SPG7-215ENST00000566682 NGEFQ8N5V2 710 aa17.8■□□□□ 0.44
SPG7-215ENST00000566682 FKBP8Q14318 412 aa17.79■□□□□ 0.44
SPG7-215ENST00000566682 WDR63Q8IWG1 891 aa17.79■□□□□ 0.44
SPG7-215ENST00000566682 TBC1D2BQ9UPU7 963 aa17.79■□□□□ 0.44
SPG7-215ENST00000566682 IL16Q14005 1332 aa17.78■□□□□ 0.44
SPG7-215ENST00000566682 FHDC1Q9C0D6 1143 aaPredicted RBP17.78■□□□□ 0.44
SPG7-215ENST00000566682 BCL2L12Q9HB09 334 aa17.78■□□□□ 0.44
SPG7-215ENST00000566682 MMP10P09238 476 aa17.77■□□□□ 0.44
SPG7-215ENST00000566682 DUSP27Q5VZP5 1158 aa17.77■□□□□ 0.44
SPG7-215ENST00000566682 DZIP3Q86Y13 1208 aaKnown RBP17.77■□□□□ 0.44
SPG7-215ENST00000566682 NECTIN2Q92692 538 aa17.77■□□□□ 0.44
SPG7-215ENST00000566682 TSR2Q969E8 191 aaKnown RBP17.77■□□□□ 0.44
SPG7-215ENST00000566682 HOXB7P09629 217 aa17.76■□□□□ 0.43
SPG7-215ENST00000566682 MYL6BP14649 208 aa17.76■□□□□ 0.43
SPG7-215ENST00000566682 SYT17Q9BSW7 474 aa17.76■□□□□ 0.43
SPG7-215ENST00000566682 ERBB4Q15303 1308 aa17.75■□□□□ 0.43
SPG7-215ENST00000566682 ELL2O00472 640 aaPredicted RBP17.75■□□□□ 0.43
SPG7-215ENST00000566682 TM4SF1P30408 202 aa17.75■□□□□ 0.43
SPG7-215ENST00000566682 PDIA6Q15084 440 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 134.1 ms