RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 IL16Q14005 1332 aa14.95□□□□□ -0.02
KARS-207ENST00000566560 COL5A3P25940 1745 aaPredicted RBP14.95□□□□□ -0.02
KARS-207ENST00000566560 ZNF790Q6PG37 636 aa14.95□□□□□ -0.02
KARS-207ENST00000566560 ZBED9Q6R2W3 1325 aa14.94□□□□□ -0.02
KARS-207ENST00000566560 GNAI1P63096 354 aa14.94□□□□□ -0.02
KARS-207ENST00000566560 DEFB132Q7Z7B7 95 aa14.94□□□□□ -0.02
KARS-207ENST00000566560 WDR63Q8IWG1 891 aa14.94□□□□□ -0.02
KARS-207ENST00000566560 CFAP44Q96MT7 982 aa14.94□□□□□ -0.02
KARS-207ENST00000566560 MIS18AQ9NYP9 233 aa14.94□□□□□ -0.02
KARS-207ENST00000566560 PLSCR1O15162 318 aa14.93□□□□□ -0.02
KARS-207ENST00000566560 KCNQ3O43525 872 aa14.93□□□□□ -0.02
KARS-207ENST00000566560 EN1Q05925 392 aaPredicted RBP14.93□□□□□ -0.02
KARS-207ENST00000566560 BABAM1Q9NWV8 329 aa14.93□□□□□ -0.02
KARS-207ENST00000566560 CIZ1Q9ULV3 898 aaPredicted RBP14.93□□□□□ -0.02
KARS-207ENST00000566560 LOC102724428A0A0B4J2F2 783 aa14.92□□□□□ -0.02
KARS-207ENST00000566560 CHL1O00533 1208 aa14.92□□□□□ -0.02
KARS-207ENST00000566560 PTCD1O75127 700 aaKnown RBP14.92□□□□□ -0.02
KARS-207ENST00000566560 ZNF853P0CG23 659 aa14.92□□□□□ -0.02
KARS-207ENST00000566560 SIK1P57059 783 aa14.92□□□□□ -0.02
KARS-207ENST00000566560 GSE1Q14687 1217 aa14.92□□□□□ -0.02
KARS-207ENST00000566560 YTHDC1Q96MU7 727 aaKnown RBP14.92□□□□□ -0.02
KARS-207ENST00000566560 MBIPQ9NS73 344 aa14.92□□□□□ -0.02
KARS-207ENST00000566560 CCNL1Q9UK58 526 aaPredicted RBP14.92□□□□□ -0.02
KARS-207ENST00000566560 FANCIQ9NVI1 1328 aa14.92□□□□□ -0.02
KARS-207ENST00000566560 HEG1Q9ULI3 1381 aa14.91□□□□□ -0.02
KARS-207ENST00000566560 GOLGA2Q08379 1002 aa14.91□□□□□ -0.02
KARS-207ENST00000566560 EZH2Q15910 746 aaKnown RBP14.91□□□□□ -0.02
KARS-207ENST00000566560 ZNF496Q96IT1 587 aaPredicted RBP14.91□□□□□ -0.02
KARS-207ENST00000566560 FMNL2Q96PY5 1086 aa14.91□□□□□ -0.02
KARS-207ENST00000566560 C4BP0C0L5 1744 aa14.91□□□□□ -0.02
KARS-207ENST00000566560 TXNRD1Q16881 649 aa14.9□□□□□ -0.02
KARS-207ENST00000566560 SLC27A3Q5K4L6 730 aa14.9□□□□□ -0.02
KARS-207ENST00000566560 RASEFQ8IZ41 740 aa14.9□□□□□ -0.02
KARS-207ENST00000566560 TSR2Q969E8 191 aaKnown RBP14.9□□□□□ -0.02
KARS-207ENST00000566560 FAM212AQ96EL1 285 aa14.9□□□□□ -0.02
KARS-207ENST00000566560 CAMKK2Q96RR4 588 aa14.9□□□□□ -0.02
KARS-207ENST00000566560 MYH16Q9H6N6 1097 aa14.9□□□□□ -0.02
KARS-207ENST00000566560 E9PSI1 815 aa14.89□□□□□ -0.03
KARS-207ENST00000566560 ATP6V1AP38606 617 aa14.89□□□□□ -0.03
KARS-207ENST00000566560 EIF4A1P60842 406 aaKnown RBP14.89□□□□□ -0.03
KARS-207ENST00000566560 DCAF8Q5TAQ9 597 aa14.89□□□□□ -0.03
KARS-207ENST00000566560 TUBGCP6Q96RT7 1819 aa14.88□□□□□ -0.03
KARS-207ENST00000566560 KCNQ4P56696 695 aa14.88□□□□□ -0.03
KARS-207ENST00000566560 SLC4A9Q96Q91 983 aa14.88□□□□□ -0.03
KARS-207ENST00000566560 SOCS7O14512 581 aa14.87□□□□□ -0.03
KARS-207ENST00000566560 ITPK1Q13572 414 aa14.87□□□□□ -0.03
KARS-207ENST00000566560 VSIG10Q8N0Z9 540 aa14.87□□□□□ -0.03
KARS-207ENST00000566560 LRRC4BQ9NT99 713 aa14.87□□□□□ -0.03
KARS-207ENST00000566560 MYH14Q7Z406 1995 aaKnown RBP14.86□□□□□ -0.03
KARS-207ENST00000566560 SNRPA1P09661 255 aaKnown RBP14.86□□□□□ -0.03
KARS-207ENST00000566560 SLFN5Q08AF3 891 aa14.86□□□□□ -0.03
KARS-207ENST00000566560 KRT24Q2M2I5 525 aa14.86□□□□□ -0.03
KARS-207ENST00000566560 DNAJC10Q8IXB1 793 aa14.86□□□□□ -0.03
KARS-207ENST00000566560 CDCA7LQ96GN5 454 aa14.86□□□□□ -0.03
KARS-207ENST00000566560 UBR3Q6ZT12 1888 aa14.86□□□□□ -0.03
KARS-207ENST00000566560 ECM2O94769 699 aaPredicted RBP14.85□□□□□ -0.03
KARS-207ENST00000566560 LINC00116Q8NCU8 138 aa14.85□□□□□ -0.03
KARS-207ENST00000566560 QSER1Q2KHR3 1735 aa14.85□□□□□ -0.03
KARS-207ENST00000566560 PRAMEF22A3QJZ6 481 aa14.84□□□□□ -0.03
KARS-207ENST00000566560 GIGYF1O75420 1035 aaPredicted RBP14.84□□□□□ -0.03
KARS-207ENST00000566560 CNTNAP4Q9C0A0 1308 aa14.84□□□□□ -0.03
KARS-207ENST00000566560 STARD3NLO95772 234 aa14.83□□□□□ -0.04
KARS-207ENST00000566560 HMGB2P26583 209 aaKnown RBP14.83□□□□□ -0.04
KARS-207ENST00000566560 DUSP27Q5VZP5 1158 aa14.83□□□□□ -0.04
KARS-207ENST00000566560 TEX13AQ9BXU3 409 aaPredicted RBP14.83□□□□□ -0.04
KARS-207ENST00000566560 C4AP0C0L4 1744 aa14.83□□□□□ -0.04
KARS-207ENST00000566560 HOXB7P09629 217 aa14.82□□□□□ -0.04
KARS-207ENST00000566560 CYP19A1P11511 503 aaPredicted RBP14.82□□□□□ -0.04
KARS-207ENST00000566560 CRKLP46109 303 aaKnown RBP14.82□□□□□ -0.04
KARS-207ENST00000566560 EXOSC9Q06265 439 aaKnown RBP14.82□□□□□ -0.04
KARS-207ENST00000566560 C8orf58Q8NAV2 365 aa14.82□□□□□ -0.04
KARS-207ENST00000566560 AK7Q96M32 723 aa14.82□□□□□ -0.04
KARS-207ENST00000566560 ANO8Q9HCE9 1232 aaPredicted RBP14.82□□□□□ -0.04
KARS-207ENST00000566560 ELL2O00472 640 aaPredicted RBP14.81□□□□□ -0.04
KARS-207ENST00000566560 ZNF827Q17R98 1081 aa14.81□□□□□ -0.04
KARS-207ENST00000566560 TWISTNBQ3B726 338 aaPredicted RBP14.81□□□□□ -0.04
KARS-207ENST00000566560 TSPYL6Q8N831 410 aa14.81□□□□□ -0.04
KARS-207ENST00000566560 SOS1Q07889 1333 aaPredicted RBP14.81□□□□□ -0.04
KARS-207ENST00000566560 GNPATO15228 680 aa14.8□□□□□ -0.04
KARS-207ENST00000566560 EIF2S2P20042 333 aaKnown RBP14.8□□□□□ -0.04
KARS-207ENST00000566560 HDGFL1Q5TGJ6 251 aa14.8□□□□□ -0.04
KARS-207ENST00000566560 TRMT2AQ8IZ69 625 aaKnown RBP14.8□□□□□ -0.04
KARS-207ENST00000566560 CCDC87Q9NVE4 849 aa14.8□□□□□ -0.04
KARS-207ENST00000566560 STK32BQ9NY57 414 aa14.8□□□□□ -0.04
KARS-207ENST00000566560 ZBTB1Q9Y2K1 713 aa14.8□□□□□ -0.04
KARS-207ENST00000566560 USP16Q9Y5T5 823 aa14.8□□□□□ -0.04
KARS-207ENST00000566560 SCN7AQ01118 1682 aa14.79□□□□□ -0.04
KARS-207ENST00000566560 NBPF14Q5TI25 921 aa14.79□□□□□ -0.04
KARS-207ENST00000566560 NECTIN2Q92692 538 aa14.79□□□□□ -0.04
KARS-207ENST00000566560 CACNA1FO60840 1977 aa14.78□□□□□ -0.04
KARS-207ENST00000566560 BCORQ6W2J9 1755 aa14.78□□□□□ -0.04
KARS-207ENST00000566560 ERBB4Q15303 1308 aa14.78□□□□□ -0.04
KARS-207ENST00000566560 RC3H1Q5TC82 1133 aaKnown RBP14.78□□□□□ -0.04
KARS-207ENST00000566560 INTS5Q6P9B9 1019 aaKnown RBP14.78□□□□□ -0.04
KARS-207ENST00000566560 COL15A1P39059 1388 aa14.77□□□□□ -0.04
KARS-207ENST00000566560 A1BGP04217 495 aa14.77□□□□□ -0.05
KARS-207ENST00000566560 CANXP27824 592 aaKnown RBP14.77□□□□□ -0.05
KARS-207ENST00000566560 PIP4K2AP48426 406 aaPredicted RBP14.77□□□□□ -0.05
KARS-207ENST00000566560 SLC15A2Q16348 729 aa14.77□□□□□ -0.05
KARS-207ENST00000566560 TFCP2L1Q9NZI6 479 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms