RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 WWC3Q9ULE0 1092 aa19.53■□□□□ 0.72
FANCA-220ENST00000566409 BTBD11A6QL63 1104 aa19.52■□□□□ 0.72
FANCA-220ENST00000566409 GRIN3BO60391 1043 aa19.52■□□□□ 0.72
FANCA-220ENST00000566409 RALBP1Q15311 655 aa19.52■□□□□ 0.72
FANCA-220ENST00000566409 USPL1Q5W0Q7 1092 aa19.52■□□□□ 0.72
FANCA-220ENST00000566409 COL15A1P39059 1388 aa19.52■□□□□ 0.72
FANCA-220ENST00000566409 PXDNLA1KZ92 1463 aa19.52■□□□□ 0.72
FANCA-220ENST00000566409 CANXP27824 592 aaKnown RBP19.51■□□□□ 0.71
FANCA-220ENST00000566409 TM4SF1P30408 202 aa19.51■□□□□ 0.71
FANCA-220ENST00000566409 BCL2L12Q9HB09 334 aa19.51■□□□□ 0.71
FANCA-220ENST00000566409 NARFQ9UHQ1 456 aa19.51■□□□□ 0.71
FANCA-220ENST00000566409 PARP3Q9Y6F1 533 aa19.51■□□□□ 0.71
FANCA-220ENST00000566409 HTATSF1O43719 755 aaKnown RBP19.5■□□□□ 0.71
FANCA-220ENST00000566409 STARD3NLO95772 234 aa19.5■□□□□ 0.71
FANCA-220ENST00000566409 EIF5P55010 431 aaKnown RBP19.5■□□□□ 0.71
FANCA-220ENST00000566409 RTF1Q92541 710 aaKnown RBP19.5■□□□□ 0.71
FANCA-220ENST00000566409 FMNL2Q96PY5 1086 aa19.5■□□□□ 0.71
FANCA-220ENST00000566409 BRCA1P38398 1863 aaKnown RBP19.5■□□□□ 0.71
FANCA-220ENST00000566409 AFDNP55196 1824 aaKnown RBP19.49■□□□□ 0.71
FANCA-220ENST00000566409 A0A0G2JLW4 131 aa19.49■□□□□ 0.71
FANCA-220ENST00000566409 ZPR1O75312 459 aa19.49■□□□□ 0.71
FANCA-220ENST00000566409 PRAMEF22A3QJZ6 481 aa19.48■□□□□ 0.71
FANCA-220ENST00000566409 POLRMTO00411 1230 aaKnown RBP19.48■□□□□ 0.71
FANCA-220ENST00000566409 TGFB2P61812 414 aa19.48■□□□□ 0.71
FANCA-220ENST00000566409 TEX13AQ9BXU3 409 aaPredicted RBP19.48■□□□□ 0.71
FANCA-220ENST00000566409 A1BGP04217 495 aa19.47■□□□□ 0.71
FANCA-220ENST00000566409 USP16Q9Y5T5 823 aa19.47■□□□□ 0.71
FANCA-220ENST00000566409 DPEP1P16444 411 aa19.46■□□□□ 0.71
FANCA-220ENST00000566409 KCNA3P22001 575 aa19.46■□□□□ 0.71
FANCA-220ENST00000566409 NFIXQ14938 502 aa19.46■□□□□ 0.71
FANCA-220ENST00000566409 MIS18AQ9NYP9 233 aa19.46■□□□□ 0.71
FANCA-220ENST00000566409 NRXN2Q9P2S2 1712 aa19.45■□□□□ 0.7
FANCA-220ENST00000566409 TAF7Q15545 349 aaPredicted RBP19.45■□□□□ 0.7
FANCA-220ENST00000566409 NFE2L2Q16236 605 aa19.45■□□□□ 0.7
FANCA-220ENST00000566409 MYBBP1AQ9BQG0 1328 aaKnown RBP19.44■□□□□ 0.7
FANCA-220ENST00000566409 KDM3BQ7LBC6 1761 aa19.43■□□□□ 0.7
FANCA-220ENST00000566409 IL6STP40189 918 aaPredicted RBP19.43■□□□□ 0.7
FANCA-220ENST00000566409 THUMPD2Q9BTF0 503 aaKnown RBP19.43■□□□□ 0.7
FANCA-220ENST00000566409 SCN7AQ01118 1682 aa19.43■□□□□ 0.7
FANCA-220ENST00000566409 NEFMP07197 916 aa19.42■□□□□ 0.7
FANCA-220ENST00000566409 PIP4K2AP48426 406 aaPredicted RBP19.42■□□□□ 0.7
FANCA-220ENST00000566409 TBC1D2BQ9UPU7 963 aa19.42■□□□□ 0.7
FANCA-220ENST00000566409 A0A087WZG4 1122 aa19.41■□□□□ 0.7
FANCA-220ENST00000566409 SNRPA1P09661 255 aaKnown RBP19.41■□□□□ 0.7
FANCA-220ENST00000566409 ZNF330Q9Y3S2 320 aaPredicted RBP19.41■□□□□ 0.7
FANCA-220ENST00000566409 ARFGEF1Q9Y6D6 1849 aa19.4■□□□□ 0.7
FANCA-220ENST00000566409 CHRNA5P30532 468 aa19.4■□□□□ 0.7
FANCA-220ENST00000566409 PNNQ9H307 717 aaKnown RBP19.4■□□□□ 0.7
FANCA-220ENST00000566409 BCS1LQ9Y276 419 aa19.4■□□□□ 0.7
FANCA-220ENST00000566409 NBPF26B4DH59 902 aa19.39■□□□□ 0.69
FANCA-220ENST00000566409 SERPINB2P05120 415 aa19.39■□□□□ 0.69
FANCA-220ENST00000566409 TBC1D9BQ66K14 1250 aa19.39■□□□□ 0.69
FANCA-220ENST00000566409 NBPF10Q6P3W6 841 aaKnown RBP19.39■□□□□ 0.69
FANCA-220ENST00000566409 NBPF15Q8N660 670 aa19.39■□□□□ 0.69
FANCA-220ENST00000566409 MAPK8IP3Q9UPT6 1336 aa19.39■□□□□ 0.69
FANCA-220ENST00000566409 BCORQ6W2J9 1755 aa19.39■□□□□ 0.69
FANCA-220ENST00000566409 ADCY9O60503 1353 aa19.38■□□□□ 0.69
FANCA-220ENST00000566409 CAMTA2O94983 1202 aa19.38■□□□□ 0.69
FANCA-220ENST00000566409 BICDL1Q6ZP65 573 aa19.38■□□□□ 0.69
FANCA-220ENST00000566409 PRKRIP1Q9H875 184 aaPredicted RBP19.38■□□□□ 0.69
FANCA-220ENST00000566409 LAMB4A4D0S4 1761 aa19.37■□□□□ 0.69
FANCA-220ENST00000566409 CARMIL3Q8ND23 1372 aa19.37■□□□□ 0.69
FANCA-220ENST00000566409 PIM2Q9P1W9 311 aa19.37■□□□□ 0.69
FANCA-220ENST00000566409 ANKRD31Q8N7Z5 1873 aa19.37■□□□□ 0.69
FANCA-220ENST00000566409 TMPOP42166 694 aaKnown RBP19.36■□□□□ 0.69
FANCA-220ENST00000566409 RIPK4P57078 832 aa19.36■□□□□ 0.69
FANCA-220ENST00000566409 EIF4A1P60842 406 aaKnown RBP19.36■□□□□ 0.69
FANCA-220ENST00000566409 ATP10DQ9P241 1426 aa19.35■□□□□ 0.69
FANCA-220ENST00000566409 DLEC1Q9Y238 1755 aa19.35■□□□□ 0.69
FANCA-220ENST00000566409 GIGYF1O75420 1035 aaPredicted RBP19.35■□□□□ 0.69
FANCA-220ENST00000566409 DZIP3Q86Y13 1208 aaKnown RBP19.35■□□□□ 0.69
FANCA-220ENST00000566409 CCDC146Q8IYE0 955 aa19.35■□□□□ 0.69
FANCA-220ENST00000566409 PNISRQ8TF01 805 aaKnown RBP19.35■□□□□ 0.69
FANCA-220ENST00000566409 DALRD3Q5D0E6 543 aaKnown RBP19.33■□□□□ 0.68
FANCA-220ENST00000566409 ARHGAP27Q6ZUM4 889 aa19.33■□□□□ 0.68
FANCA-220ENST00000566409 ADAMTS8Q9UP79 889 aa19.33■□□□□ 0.68
FANCA-220ENST00000566409 RRP7AQ9Y3A4 280 aaKnown RBP19.33■□□□□ 0.68
FANCA-220ENST00000566409 CCDC24Q8N4L8 307 aa19.32■□□□□ 0.68
FANCA-220ENST00000566409 ZEB1P37275 1124 aaPredicted RBP19.31■□□□□ 0.68
FANCA-220ENST00000566409 PRR5LQ6MZQ0 368 aa19.31■□□□□ 0.68
FANCA-220ENST00000566409 NPM2Q86SE8 214 aaKnown RBP19.31■□□□□ 0.68
FANCA-220ENST00000566409 RUNDC1Q96C34 613 aa19.3■□□□□ 0.68
FANCA-220ENST00000566409 SETDB2Q96T68 719 aa19.3■□□□□ 0.68
FANCA-220ENST00000566409 SBF1O95248 1867 aa19.3■□□□□ 0.68
FANCA-220ENST00000566409 COL11A2P13942 1736 aaPredicted RBP19.29■□□□□ 0.68
FANCA-220ENST00000566409 WDR43Q15061 677 aaKnown RBP eCLIP19.29■□□□□ 0.68
FANCA-220ENST00000566409 NEUROD2Q15784 382 aa19.29■□□□□ 0.68
FANCA-220ENST00000566409 CLEC4GQ6UXB4 293 aa19.29■□□□□ 0.68
FANCA-220ENST00000566409 C2CD5Q86YS7 1000 aa19.29■□□□□ 0.68
FANCA-220ENST00000566409 TSPYL4Q9UJ04 414 aa19.29■□□□□ 0.68
FANCA-220ENST00000566409 TRIM35Q9UPQ4 493 aa19.29■□□□□ 0.68
FANCA-220ENST00000566409 C1QTNF8P60827 252 aa19.28■□□□□ 0.68
FANCA-220ENST00000566409 HLFQ16534 295 aa19.28■□□□□ 0.68
FANCA-220ENST00000566409 BRIP1Q9BX63 1249 aa19.28■□□□□ 0.68
FANCA-220ENST00000566409 NUP98P52948 1817 aa19.28■□□□□ 0.68
FANCA-220ENST00000566409 H0YIN7 160 aa19.27■□□□□ 0.68
FANCA-220ENST00000566409 ZNF526Q8TF50 670 aaPredicted RBP19.27■□□□□ 0.68
FANCA-220ENST00000566409 LMOD3Q0VAK6 560 aa19.26■□□□□ 0.67
FANCA-220ENST00000566409 NGEFQ8N5V2 710 aa19.26■□□□□ 0.67
FANCA-220ENST00000566409 BABAM1Q9NWV8 329 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms