RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 UBR3Q6ZT12 1888 aa19.06■□□□□ 0.64
SPG7-213ENST00000566221 HMGB2P26583 209 aaKnown RBP19.06■□□□□ 0.64
SPG7-213ENST00000566221 EN1Q05925 392 aaPredicted RBP19.06■□□□□ 0.64
SPG7-213ENST00000566221 ZNF428Q96B54 188 aa19.06■□□□□ 0.64
SPG7-213ENST00000566221 TUBGCP6Q96RT7 1819 aa19.05■□□□□ 0.64
SPG7-213ENST00000566221 PRAMEF22A3QJZ6 481 aa19.05■□□□□ 0.64
SPG7-213ENST00000566221 VAMP4O75379 141 aa19.05■□□□□ 0.64
SPG7-213ENST00000566221 TXNRD1Q16881 649 aa19.05■□□□□ 0.64
SPG7-213ENST00000566221 HDGFL1Q5TGJ6 251 aa19.05■□□□□ 0.64
SPG7-213ENST00000566221 DNAJC10Q8IXB1 793 aa19.05■□□□□ 0.64
SPG7-213ENST00000566221 STARD3NLO95772 234 aa19.04■□□□□ 0.64
SPG7-213ENST00000566221 ITPK1Q13572 414 aa19.04■□□□□ 0.64
SPG7-213ENST00000566221 ERBB4Q15303 1308 aa19.03■□□□□ 0.64
SPG7-213ENST00000566221 QSER1Q2KHR3 1735 aa19.03■□□□□ 0.64
SPG7-213ENST00000566221 CCDC30Q5VVM6 783 aa19.03■□□□□ 0.64
SPG7-213ENST00000566221 CYP19A1P11511 503 aaPredicted RBP19.02■□□□□ 0.64
SPG7-213ENST00000566221 EIF2S2P20042 333 aaKnown RBP19.02■□□□□ 0.64
SPG7-213ENST00000566221 CAMKK2Q96RR4 588 aa19.02■□□□□ 0.64
SPG7-213ENST00000566221 USP16Q9Y5T5 823 aa19.02■□□□□ 0.64
SPG7-213ENST00000566221 CNTNAP4Q9C0A0 1308 aa19.01■□□□□ 0.63
SPG7-213ENST00000566221 LINC00116Q8NCU8 138 aa19.01■□□□□ 0.63
SPG7-213ENST00000566221 LRRC4BQ9NT99 713 aa19.01■□□□□ 0.63
SPG7-213ENST00000566221 C4AP0C0L4 1744 aa19■□□□□ 0.63
SPG7-213ENST00000566221 CRKLP46109 303 aaKnown RBP19■□□□□ 0.63
SPG7-213ENST00000566221 KCNQ4P56696 695 aa19■□□□□ 0.63
SPG7-213ENST00000566221 ALDH1L2Q3SY69 923 aa19■□□□□ 0.63
SPG7-213ENST00000566221 PROM2Q8N271 834 aa19■□□□□ 0.63
SPG7-213ENST00000566221 NECTIN2Q92692 538 aa19■□□□□ 0.63
SPG7-213ENST00000566221 STK31Q9BXU1 1019 aa19■□□□□ 0.63
SPG7-213ENST00000566221 CCDC87Q9NVE4 849 aa19■□□□□ 0.63
SPG7-213ENST00000566221 EZH2Q15910 746 aaKnown RBP18.99■□□□□ 0.63
SPG7-213ENST00000566221 DBF4Q9UBU7 674 aaPredicted RBP18.99■□□□□ 0.63
SPG7-213ENST00000566221 BCORQ6W2J9 1755 aa18.98■□□□□ 0.63
SPG7-213ENST00000566221 DCAF8L1A6NGE4 600 aa18.98■□□□□ 0.63
SPG7-213ENST00000566221 RARSP54136 660 aaKnown RBP18.98■□□□□ 0.63
SPG7-213ENST00000566221 RC3H1Q5TC82 1133 aaKnown RBP18.98■□□□□ 0.63
SPG7-213ENST00000566221 CHPF2Q9P2E5 772 aa18.98■□□□□ 0.63
SPG7-213ENST00000566221 RCAN3Q9UKA8 241 aa18.98■□□□□ 0.63
SPG7-213ENST00000566221 ARFGEF2Q9Y6D5 1785 aa18.97■□□□□ 0.63
SPG7-213ENST00000566221 DDX21Q9NR30 783 aaKnown RBP eCLIP18.97■□□□□ 0.63
SPG7-213ENST00000566221 SMC4Q9NTJ3 1288 aa18.97■□□□□ 0.63
SPG7-213ENST00000566221 N4BP2Q86UW6 1770 aaPredicted RBP18.96■□□□□ 0.63
SPG7-213ENST00000566221 SCN7AQ01118 1682 aa18.96■□□□□ 0.63
SPG7-213ENST00000566221 A1BGP04217 495 aa18.96■□□□□ 0.63
SPG7-213ENST00000566221 SSH1Q8WYL5 1049 aa18.96■□□□□ 0.63
SPG7-213ENST00000566221 ZBTB1Q9Y2K1 713 aa18.96■□□□□ 0.63
SPG7-213ENST00000566221 PDIA6Q15084 440 aa18.95■□□□□ 0.62
SPG7-213ENST00000566221 INTS5Q6P9B9 1019 aaKnown RBP18.95■□□□□ 0.62
SPG7-213ENST00000566221 AK7Q96M32 723 aa18.95■□□□□ 0.62
SPG7-213ENST00000566221 HYPKQ9NX55 129 aa18.95■□□□□ 0.62
SPG7-213ENST00000566221 KIF16BQ96L93 1317 aa18.95■□□□□ 0.62
SPG7-213ENST00000566221 ANKRD36CQ5JPF3 1778 aa18.94■□□□□ 0.62
SPG7-213ENST00000566221 NBPF26B4DH59 902 aa18.94■□□□□ 0.62
SPG7-213ENST00000566221 TCERG1O14776 1098 aaKnown RBP18.94■□□□□ 0.62
SPG7-213ENST00000566221 NBPF14Q5TI25 921 aa18.94■□□□□ 0.62
SPG7-213ENST00000566221 NBPF10Q6P3W6 841 aaKnown RBP18.94■□□□□ 0.62
SPG7-213ENST00000566221 NBPF15Q8N660 670 aa18.94■□□□□ 0.62
SPG7-213ENST00000566221 BCL2L13Q9BXK5 485 aa18.94■□□□□ 0.62
SPG7-213ENST00000566221 NUP98P52948 1817 aa18.94■□□□□ 0.62
SPG7-213ENST00000566221 GNPATO15228 680 aa18.93■□□□□ 0.62
SPG7-213ENST00000566221 SLC4A2P04920 1241 aa18.93■□□□□ 0.62
SPG7-213ENST00000566221 MYL6BP14649 208 aa18.93■□□□□ 0.62
SPG7-213ENST00000566221 CANXP27824 592 aaKnown RBP18.93■□□□□ 0.62
SPG7-213ENST00000566221 IL6STP40189 918 aaPredicted RBP18.93■□□□□ 0.62
SPG7-213ENST00000566221 PIP4K2AP48426 406 aaPredicted RBP18.93■□□□□ 0.62
SPG7-213ENST00000566221 BRPF1P55201 1214 aaPredicted RBP18.93■□□□□ 0.62
SPG7-213ENST00000566221 PROSER3Q2NL68 480 aa18.93■□□□□ 0.62
SPG7-213ENST00000566221 MRPL50Q8N5N7 158 aaKnown RBP18.93■□□□□ 0.62
SPG7-213ENST00000566221 COL15A1P39059 1388 aa18.93■□□□□ 0.62
SPG7-213ENST00000566221 RPS6KA4O75676 772 aa18.92■□□□□ 0.62
SPG7-213ENST00000566221 ANXA1P04083 346 aa18.92■□□□□ 0.62
SPG7-213ENST00000566221 LRP10Q7Z4F1 713 aa18.91■□□□□ 0.62
SPG7-213ENST00000566221 NPM2Q86SE8 214 aaKnown RBP18.91■□□□□ 0.62
SPG7-213ENST00000566221 AKT1S1Q96B36 256 aa18.91■□□□□ 0.62
SPG7-213ENST00000566221 PPP1R1BQ9UD71 204 aaPredicted RBP18.91■□□□□ 0.62
SPG7-213ENST00000566221 RTCBQ9Y3I0 505 aaKnown RBP18.91■□□□□ 0.62
SPG7-213ENST00000566221 ZNF330Q9Y3S2 320 aaPredicted RBP18.91■□□□□ 0.62
SPG7-213ENST00000566221 AFDNP55196 1824 aaKnown RBP18.9■□□□□ 0.62
SPG7-213ENST00000566221 BCAR3O75815 825 aa18.9■□□□□ 0.62
SPG7-213ENST00000566221 EIF5P55010 431 aaKnown RBP18.9■□□□□ 0.62
SPG7-213ENST00000566221 ZNF827Q17R98 1081 aa18.9■□□□□ 0.62
SPG7-213ENST00000566221 ADRA2BP18089 450 aa18.89■□□□□ 0.61
SPG7-213ENST00000566221 SSFA2P28290 1259 aa18.89■□□□□ 0.61
SPG7-213ENST00000566221 FLIIQ13045 1269 aa18.89■□□□□ 0.61
SPG7-213ENST00000566221 ANO8Q9HCE9 1232 aaPredicted RBP18.89■□□□□ 0.61
SPG7-213ENST00000566221 STK32BQ9NY57 414 aa18.89■□□□□ 0.61
SPG7-213ENST00000566221 PTPRCP08575 1304 aa18.89■□□□□ 0.61
SPG7-213ENST00000566221 A0A087WZG4 1122 aa18.88■□□□□ 0.61
SPG7-213ENST00000566221 G2E3Q7L622 706 aa18.88■□□□□ 0.61
SPG7-213ENST00000566221 XAGE3Q8WTP9 111 aa18.88■□□□□ 0.61
SPG7-213ENST00000566221 PHAXQ9H814 394 aaKnown RBP18.88■□□□□ 0.61
SPG7-213ENST00000566221 TFCP2L1Q9NZI6 479 aa18.88■□□□□ 0.61
SPG7-213ENST00000566221 DDX58O95786 925 aaKnown RBP18.87■□□□□ 0.61
SPG7-213ENST00000566221 KIF6Q6ZMV9 814 aa18.87■□□□□ 0.61
SPG7-213ENST00000566221 PXDNLA1KZ92 1463 aa18.86■□□□□ 0.61
SPG7-213ENST00000566221 IPO8O15397 1037 aaKnown RBP18.86■□□□□ 0.61
SPG7-213ENST00000566221 AIMP1Q12904 312 aaKnown RBP18.86■□□□□ 0.61
SPG7-213ENST00000566221 FKBP5Q13451 457 aaPredicted RBP18.86■□□□□ 0.61
SPG7-213ENST00000566221 SLC15A2Q16348 729 aa18.86■□□□□ 0.61
SPG7-213ENST00000566221 COPS6Q7L5N1 327 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms