RNA–Protein interactions for RNA: ENST00000565788.1

MAP1LC3B-207, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2 BASIC

Gene MAP1LC3B, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-207ENST00000565788 DPEP1P16444 411 aa23.33■■□□□ 1.33
MAP1LC3B-207ENST00000565788 ADCY9O60503 1353 aa23.32■■□□□ 1.32
MAP1LC3B-207ENST00000565788 ZPR1O75312 459 aa23.32■■□□□ 1.32
MAP1LC3B-207ENST00000565788 ZNF790Q6PG37 636 aa23.32■■□□□ 1.32
MAP1LC3B-207ENST00000565788 ZNF496Q96IT1 587 aaPredicted RBP23.32■■□□□ 1.32
MAP1LC3B-207ENST00000565788 HEG1Q9ULI3 1381 aa23.31■■□□□ 1.32
MAP1LC3B-207ENST00000565788 POLRMTO00411 1230 aaKnown RBP23.3■■□□□ 1.32
MAP1LC3B-207ENST00000565788 GIGYF1O75420 1035 aaPredicted RBP23.3■■□□□ 1.32
MAP1LC3B-207ENST00000565788 CANXP27824 592 aaKnown RBP23.3■■□□□ 1.32
MAP1LC3B-207ENST00000565788 TM4SF1P30408 202 aa23.3■■□□□ 1.32
MAP1LC3B-207ENST00000565788 C1QTNF8P60827 252 aa23.3■■□□□ 1.32
MAP1LC3B-207ENST00000565788 NARFQ9UHQ1 456 aa23.3■■□□□ 1.32
MAP1LC3B-207ENST00000565788 BCS1LQ9Y276 419 aa23.3■■□□□ 1.32
MAP1LC3B-207ENST00000565788 AFDNP55196 1824 aaKnown RBP23.29■■□□□ 1.32
MAP1LC3B-207ENST00000565788 FCHSD2O94868 740 aa23.28■■□□□ 1.32
MAP1LC3B-207ENST00000565788 BCL2L12Q9HB09 334 aa23.28■■□□□ 1.32
MAP1LC3B-207ENST00000565788 KCNQ3O43525 872 aa23.27■■□□□ 1.32
MAP1LC3B-207ENST00000565788 STARD3NLO95772 234 aa23.27■■□□□ 1.32
MAP1LC3B-207ENST00000565788 KCNA3P22001 575 aa23.27■■□□□ 1.32
MAP1LC3B-207ENST00000565788 NRXN2Q9P2S2 1712 aa23.26■■□□□ 1.31
MAP1LC3B-207ENST00000565788 BTBD11A6QL63 1104 aa23.26■■□□□ 1.31
MAP1LC3B-207ENST00000565788 EIF5P55010 431 aaKnown RBP23.26■■□□□ 1.31
MAP1LC3B-207ENST00000565788 NFIXQ14938 502 aa23.26■■□□□ 1.31
MAP1LC3B-207ENST00000565788 FMNL2Q96PY5 1086 aa23.26■■□□□ 1.31
MAP1LC3B-207ENST00000565788 ARFGEF1Q9Y6D6 1849 aa23.26■■□□□ 1.31
MAP1LC3B-207ENST00000565788 MCM10Q7L590 875 aa23.25■■□□□ 1.31
MAP1LC3B-207ENST00000565788 RTF1Q92541 710 aaKnown RBP23.24■■□□□ 1.31
MAP1LC3B-207ENST00000565788 TEX13AQ9BXU3 409 aaPredicted RBP23.24■■□□□ 1.31
MAP1LC3B-207ENST00000565788 SCN7AQ01118 1682 aa23.24■■□□□ 1.31
MAP1LC3B-207ENST00000565788 DCTN1Q14203 1278 aa23.23■■□□□ 1.31
MAP1LC3B-207ENST00000565788 ZNF526Q8TF50 670 aaPredicted RBP23.23■■□□□ 1.31
MAP1LC3B-207ENST00000565788 CHRNA5P30532 468 aa23.22■■□□□ 1.31
MAP1LC3B-207ENST00000565788 GPBP1L1Q9HC44 474 aaPredicted RBP23.22■■□□□ 1.31
MAP1LC3B-207ENST00000565788 PIM2Q9P1W9 311 aa23.22■■□□□ 1.31
MAP1LC3B-207ENST00000565788 A0A087WZG4 1122 aa23.21■■□□□ 1.31
MAP1LC3B-207ENST00000565788 A1BGP04217 495 aa23.21■■□□□ 1.31
MAP1LC3B-207ENST00000565788 ARHGAP27Q6ZUM4 889 aa23.21■■□□□ 1.31
MAP1LC3B-207ENST00000565788 ZNF330Q9Y3S2 320 aaPredicted RBP23.21■■□□□ 1.31
MAP1LC3B-207ENST00000565788 DLG5Q8TDM6 1919 aa23.21■■□□□ 1.31
MAP1LC3B-207ENST00000565788 SENP3-EIF4A1A0A087X0R7 540 aa23.2■■□□□ 1.3
MAP1LC3B-207ENST00000565788 SERPINB2P05120 415 aa23.19■■□□□ 1.3
MAP1LC3B-207ENST00000565788 IL6STP40189 918 aaPredicted RBP23.19■■□□□ 1.3
MAP1LC3B-207ENST00000565788 PRAMEF22A3QJZ6 481 aa23.18■■□□□ 1.3
MAP1LC3B-207ENST00000565788 HTATSF1O43719 755 aaKnown RBP23.18■■□□□ 1.3
MAP1LC3B-207ENST00000565788 DALRD3Q5D0E6 543 aaKnown RBP23.18■■□□□ 1.3
MAP1LC3B-207ENST00000565788 BICDL1Q6ZP65 573 aa23.18■■□□□ 1.3
MAP1LC3B-207ENST00000565788 TBC1D2BQ9UPU7 963 aa23.18■■□□□ 1.3
MAP1LC3B-207ENST00000565788 USP16Q9Y5T5 823 aa23.18■■□□□ 1.3
MAP1LC3B-207ENST00000565788 DLEC1Q9Y238 1755 aa23.17■■□□□ 1.3
MAP1LC3B-207ENST00000565788 CARMIL3Q8ND23 1372 aa23.17■■□□□ 1.3
MAP1LC3B-207ENST00000565788 TBC1D9BQ66K14 1250 aa23.17■■□□□ 1.3
MAP1LC3B-207ENST00000565788 BCORQ6W2J9 1755 aa23.17■■□□□ 1.3
MAP1LC3B-207ENST00000565788 PIP4K2AP48426 406 aaPredicted RBP23.15■■□□□ 1.3
MAP1LC3B-207ENST00000565788 PLEKHF1Q96S99 279 aa23.15■■□□□ 1.3
MAP1LC3B-207ENST00000565788 ANKRD31Q8N7Z5 1873 aa23.14■■□□□ 1.29
MAP1LC3B-207ENST00000565788 NEFMP07197 916 aa23.14■■□□□ 1.29
MAP1LC3B-207ENST00000565788 SNRPA1P09661 255 aaKnown RBP23.13■■□□□ 1.29
MAP1LC3B-207ENST00000565788 KDM3BQ7LBC6 1761 aa23.12■■□□□ 1.29
MAP1LC3B-207ENST00000565788 CAMTA2O94983 1202 aa23.12■■□□□ 1.29
MAP1LC3B-207ENST00000565788 TAF7Q15545 349 aaPredicted RBP23.12■■□□□ 1.29
MAP1LC3B-207ENST00000565788 NPM2Q86SE8 214 aaKnown RBP23.12■■□□□ 1.29
MAP1LC3B-207ENST00000565788 C9orf131Q5VYM1 1079 aa23.11■■□□□ 1.29
MAP1LC3B-207ENST00000565788 DZIP3Q86Y13 1208 aaKnown RBP23.11■■□□□ 1.29
MAP1LC3B-207ENST00000565788 MIS18AQ9NYP9 233 aa23.11■■□□□ 1.29
MAP1LC3B-207ENST00000565788 LAMB4A4D0S4 1761 aa23.11■■□□□ 1.29
MAP1LC3B-207ENST00000565788 NFE2L2Q16236 605 aa23.1■■□□□ 1.29
MAP1LC3B-207ENST00000565788 C2CD5Q86YS7 1000 aa23.1■■□□□ 1.29
MAP1LC3B-207ENST00000565788 SBF1O95248 1867 aa23.1■■□□□ 1.29
MAP1LC3B-207ENST00000565788 KIF3CO14782 793 aa23.09■■□□□ 1.29
MAP1LC3B-207ENST00000565788 DDX10Q13206 875 aaKnown RBP23.09■■□□□ 1.29
MAP1LC3B-207ENST00000565788 COL11A2P13942 1736 aaPredicted RBP23.08■■□□□ 1.29
MAP1LC3B-207ENST00000565788 RALBP1Q15311 655 aa23.08■■□□□ 1.29
MAP1LC3B-207ENST00000565788 PRR5LQ6MZQ0 368 aa23.08■■□□□ 1.29
MAP1LC3B-207ENST00000565788 CCDC24Q8N4L8 307 aa23.08■■□□□ 1.29
MAP1LC3B-207ENST00000565788 MAPK8IP3Q9UPT6 1336 aa23.08■■□□□ 1.28
MAP1LC3B-207ENST00000565788 H0YIN7 160 aa23.07■■□□□ 1.28
MAP1LC3B-207ENST00000565788 THUMPD2Q9BTF0 503 aaKnown RBP23.07■■□□□ 1.28
MAP1LC3B-207ENST00000565788 NBPF26B4DH59 902 aa23.06■■□□□ 1.28
MAP1LC3B-207ENST00000565788 NBPF10Q6P3W6 841 aaKnown RBP23.06■■□□□ 1.28
MAP1LC3B-207ENST00000565788 NBPF15Q8N660 670 aa23.06■■□□□ 1.28
MAP1LC3B-207ENST00000565788 TTLL6Q8N841 843 aa23.06■■□□□ 1.28
MAP1LC3B-207ENST00000565788 SETDB2Q96T68 719 aa23.06■■□□□ 1.28
MAP1LC3B-207ENST00000565788 PNNQ9H307 717 aaKnown RBP23.06■■□□□ 1.28
MAP1LC3B-207ENST00000565788 RNF181Q9P0P0 153 aa23.06■■□□□ 1.28
MAP1LC3B-207ENST00000565788 RASSF7Q02833 373 aa23.05■■□□□ 1.28
MAP1LC3B-207ENST00000565788 PNISRQ8TF01 805 aaKnown RBP23.05■■□□□ 1.28
MAP1LC3B-207ENST00000565788 BRIP1Q9BX63 1249 aa23.04■■□□□ 1.28
MAP1LC3B-207ENST00000565788 CNBD1Q8NA66 436 aa23.03■■□□□ 1.28
MAP1LC3B-207ENST00000565788 PDE6BP35913 854 aa23.02■■□□□ 1.28
MAP1LC3B-207ENST00000565788 CLEC4GQ6UXB4 293 aa23.02■■□□□ 1.28
MAP1LC3B-207ENST00000565788 ZNF622Q969S3 477 aaKnown RBP eCLIP23.02■■□□□ 1.285e-7■□□□□ 9.2
MAP1LC3B-207ENST00000565788 NMRK2Q9NPI5 230 aa23.02■■□□□ 1.28
MAP1LC3B-207ENST00000565788 PDZRN3Q9UPQ7 1066 aa23.02■■□□□ 1.28
MAP1LC3B-207ENST00000565788 MYBBP1AQ9BQG0 1328 aaKnown RBP23.02■■□□□ 1.28
MAP1LC3B-207ENST00000565788 NPHP1O15259 732 aa23.01■■□□□ 1.27
MAP1LC3B-207ENST00000565788 EIF4A1P60842 406 aaKnown RBP23.01■■□□□ 1.27
MAP1LC3B-207ENST00000565788 ZNF652Q9Y2D9 606 aa23.01■■□□□ 1.27
MAP1LC3B-207ENST00000565788 CACNA1SQ13698 1873 aa23■■□□□ 1.27
MAP1LC3B-207ENST00000565788 ST5P78524 1137 aa23■■□□□ 1.27
MAP1LC3B-207ENST00000565788 CCDC88AQ3V6T2 1871 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms