RNA–Protein interactions for RNA: ENST00000565639.6

PKD1-230, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 1,976 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-230ENST00000565639 SLC4A10Q6U841 1118 aa24.33■■□□□ 1.49
PKD1-230ENST00000565639 KCPQ6ZWJ8 1503 aa24.33■■□□□ 1.49
PKD1-230ENST00000565639 LAMB4A4D0S4 1761 aa24.32■■□□□ 1.48
PKD1-230ENST00000565639 ITGB4P16144 1822 aa24.32■■□□□ 1.48
PKD1-230ENST00000565639 PDIA6Q15084 440 aa24.31■■□□□ 1.48
PKD1-230ENST00000565639 USP21Q9UK80 565 aa24.31■■□□□ 1.48
PKD1-230ENST00000565639 BCL9O00512 1426 aa24.3■■□□□ 1.48
PKD1-230ENST00000565639 ANXA1P04083 346 aa24.3■■□□□ 1.48
PKD1-230ENST00000565639 PROSER3Q2NL68 480 aa24.3■■□□□ 1.48
PKD1-230ENST00000565639 PIGBQ92521 554 aa24.3■■□□□ 1.48
PKD1-230ENST00000565639 USP16Q9Y5T5 823 aa24.3■■□□□ 1.48
PKD1-230ENST00000565639 ERBB4Q15303 1308 aa24.29■■□□□ 1.48
PKD1-230ENST00000565639 MEX3CQ5U5Q3 659 aaKnown RBP24.28■■□□□ 1.48
PKD1-230ENST00000565639 PI4KAP2A4QPH2 592 aa24.27■■□□□ 1.48
PKD1-230ENST00000565639 PI4KAP1Q8N8J0 262 aa24.27■■□□□ 1.48
PKD1-230ENST00000565639 DNAAF4Q8WXU2 420 aa24.27■■□□□ 1.48
PKD1-230ENST00000565639 MEIS3Q99687 375 aa24.27■■□□□ 1.48
PKD1-230ENST00000565639 ATP10DQ9P241 1426 aa24.27■■□□□ 1.48
PKD1-230ENST00000565639 ADCY9O60503 1353 aa24.26■■□□□ 1.47
PKD1-230ENST00000565639 DDX58O95786 925 aaKnown RBP24.26■■□□□ 1.47
PKD1-230ENST00000565639 KSR2Q6VAB6 950 aa24.26■■□□□ 1.47
PKD1-230ENST00000565639 MARCH10Q8NA82 808 aaPredicted RBP24.26■■□□□ 1.47
PKD1-230ENST00000565639 C1orf115Q9H7X2 142 aa24.26■■□□□ 1.47
PKD1-230ENST00000565639 FAM98CQ17RN3 349 aaKnown RBP24.25■■□□□ 1.47
PKD1-230ENST00000565639 VSIG10Q8N0Z9 540 aa24.25■■□□□ 1.47
PKD1-230ENST00000565639 DOT1LQ8TEK3 1739 aa24.25■■□□□ 1.47
PKD1-230ENST00000565639 SMC5Q8IY18 1101 aa24.25■■□□□ 1.47
PKD1-230ENST00000565639 TSHZ2Q9NRE2 1034 aa24.25■■□□□ 1.47
PKD1-230ENST00000565639 ATG3Q9NT62 314 aa24.25■■□□□ 1.47
PKD1-230ENST00000565639 PTCD1O75127 700 aaKnown RBP24.24■■□□□ 1.47
PKD1-230ENST00000565639 GNAI3P08754 354 aa24.24■■□□□ 1.47
PKD1-230ENST00000565639 RPAP2Q8IXW5 612 aaPredicted RBP24.24■■□□□ 1.47
PKD1-230ENST00000565639 SRCIN1Q9C0H9 1055 aa24.24■■□□□ 1.47
PKD1-230ENST00000565639 ASAP1Q9ULH1 1129 aa24.24■■□□□ 1.47
PKD1-230ENST00000565639 LRP10Q7Z4F1 713 aa24.23■■□□□ 1.47
PKD1-230ENST00000565639 TEX13AQ9BXU3 409 aaPredicted RBP24.23■■□□□ 1.47
PKD1-230ENST00000565639 BEND3Q5T5X7 828 aa24.23■■□□□ 1.47
PKD1-230ENST00000565639 PRIM1P49642 420 aaKnown RBP24.22■■□□□ 1.47
PKD1-230ENST00000565639 SIRT2Q8IXJ6 389 aa24.22■■□□□ 1.47
PKD1-230ENST00000565639 ANKRD44Q8N8A2 993 aa24.22■■□□□ 1.47
PKD1-230ENST00000565639 MAP3K2Q9Y2U5 619 aa24.22■■□□□ 1.47
PKD1-230ENST00000565639 AFF2P51816 1311 aa24.21■■□□□ 1.47
PKD1-230ENST00000565639 MYL6BP14649 208 aa24.21■■□□□ 1.47
PKD1-230ENST00000565639 THSD7AQ9UPZ6 1657 aa24.2■■□□□ 1.46
PKD1-230ENST00000565639 ALDH1L1O75891 902 aa24.2■■□□□ 1.46
PKD1-230ENST00000565639 GNAI2P04899 355 aa24.2■■□□□ 1.46
PKD1-230ENST00000565639 XAGE3Q8WTP9 111 aa24.2■■□□□ 1.46
PKD1-230ENST00000565639 SYTL4Q96C24 671 aaPredicted RBP24.2■■□□□ 1.46
PKD1-230ENST00000565639 GCC1Q96CN9 775 aa24.2■■□□□ 1.46
PKD1-230ENST00000565639 USP44Q9H0E7 712 aa24.2■■□□□ 1.46
PKD1-230ENST00000565639 PDZRN3Q9UPQ7 1066 aa24.2■■□□□ 1.46
PKD1-230ENST00000565639 CEP85Q6P2H3 762 aa24.19■■□□□ 1.46
PKD1-230ENST00000565639 COPS6Q7L5N1 327 aa24.19■■□□□ 1.46
PKD1-230ENST00000565639 SKAP1Q86WV1 359 aa24.19■■□□□ 1.46
PKD1-230ENST00000565639 KAT6BQ8WYB5 2073 aa24.19■■□□□ 1.46
PKD1-230ENST00000565639 IBTKQ9P2D0 1353 aaPredicted RBP24.18■■□□□ 1.46
PKD1-230ENST00000565639 AIMP1Q12904 312 aaKnown RBP24.18■■□□□ 1.46
PKD1-230ENST00000565639 GJD4Q96KN9 370 aaPredicted RBP24.18■■□□□ 1.46
PKD1-230ENST00000565639 ATRNO75882 1429 aa24.17■■□□□ 1.46
PKD1-230ENST00000565639 NBPF26B4DH59 902 aa24.17■■□□□ 1.46
PKD1-230ENST00000565639 NBPF14Q5TI25 921 aa24.17■■□□□ 1.46
PKD1-230ENST00000565639 NBPF10Q6P3W6 841 aaKnown RBP24.17■■□□□ 1.46
PKD1-230ENST00000565639 NBPF15Q8N660 670 aa24.17■■□□□ 1.46
PKD1-230ENST00000565639 RIC3Q7Z5B4 369 aa24.16■■□□□ 1.46
PKD1-230ENST00000565639 LINS1Q8NG48 757 aa24.16■■□□□ 1.46
PKD1-230ENST00000565639 TRPC5Q9UL62 973 aaPredicted RBP24.16■■□□□ 1.46
PKD1-230ENST00000565639 ANKRD13DQ6ZTN6 518 aa24.16■■□□□ 1.46
PKD1-230ENST00000565639 RBM42Q9BTD8 480 aaKnown RBP24.16■■□□□ 1.46
PKD1-230ENST00000565639 UBTFL1P0CB47 393 aaPredicted RBP24.15■■□□□ 1.46
PKD1-230ENST00000565639 STARD3NLO95772 234 aa24.14■■□□□ 1.46
PKD1-230ENST00000565639 RGS3P49796 1198 aa24.14■■□□□ 1.46
PKD1-230ENST00000565639 HMMRO75330 724 aa24.14■■□□□ 1.45
PKD1-230ENST00000565639 A1BGP04217 495 aa24.14■■□□□ 1.45
PKD1-230ENST00000565639 PIP4K2AP48426 406 aaPredicted RBP24.14■■□□□ 1.45
PKD1-230ENST00000565639 DNAJC10Q8IXB1 793 aa24.14■■□□□ 1.45
PKD1-230ENST00000565639 NUCB1Q02818 461 aa24.13■■□□□ 1.45
PKD1-230ENST00000565639 ACSBG1Q96GR2 724 aa24.13■■□□□ 1.45
PKD1-230ENST00000565639 METTL22Q9BUU2 404 aaPredicted RBP24.13■■□□□ 1.45
PKD1-230ENST00000565639 DCTPP1Q9H773 170 aa24.13■■□□□ 1.45
PKD1-230ENST00000565639 ONECUT3O60422 494 aaPredicted RBP24.12■■□□□ 1.45
PKD1-230ENST00000565639 NEXNQ0ZGT2 675 aa24.12■■□□□ 1.45
PKD1-230ENST00000565639 PLBD2Q8NHP8 589 aa24.12■■□□□ 1.45
PKD1-230ENST00000565639 A0A0G2JS52 829 aa24.12■■□□□ 1.45
PKD1-230ENST00000565639 MYT1Q01538 1121 aa24.12■■□□□ 1.45
PKD1-230ENST00000565639 SLC4A9Q96Q91 983 aa24.11■■□□□ 1.45
PKD1-230ENST00000565639 HDAC5Q9UQL6 1122 aa24.11■■□□□ 1.45
PKD1-230ENST00000565639 LRRFIP2Q9Y608 721 aaKnown RBP24.11■■□□□ 1.45
PKD1-230ENST00000565639 ATP8B2P98198 1209 aa24.09■■□□□ 1.45
PKD1-230ENST00000565639 SMARCC1Q92922 1105 aaPredicted RBP24.09■■□□□ 1.45
PKD1-230ENST00000565639 ARFGEF2Q9Y6D5 1785 aa24.09■■□□□ 1.45
PKD1-230ENST00000565639 NBPF7P0C2Y1 421 aaPredicted RBP24.09■■□□□ 1.45
PKD1-230ENST00000565639 CWF19L2Q2TBE0 894 aaKnown RBP24.09■■□□□ 1.45
PKD1-230ENST00000565639 UTYO14607 1347 aa24.08■■□□□ 1.45
PKD1-230ENST00000565639 IGKV5-2P06315 115 aa24.08■■□□□ 1.45
PKD1-230ENST00000565639 CYP19A1P11511 503 aaPredicted RBP24.08■■□□□ 1.45
PKD1-230ENST00000565639 CHD1LQ86WJ1 897 aa24.08■■□□□ 1.45
PKD1-230ENST00000565639 C9orf78Q9NZ63 289 aaPredicted RBP24.08■■□□□ 1.45
PKD1-230ENST00000565639 TJP1Q07157 1748 aa24.08■■□□□ 1.44
PKD1-230ENST00000565639 CICQ96RK0 1608 aaPredicted RBP24.08■■□□□ 1.44
PKD1-230ENST00000565639 NEURL1BA8MQ27 555 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms