RNA–Protein interactions for RNA: ENST00000565602.5

EDC3-208, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 5

Gene EDC3, Length 1,862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-208ENST00000565602 BRPF1P55201 1214 aaPredicted RBP23.51■■□□□ 1.35
EDC3-208ENST00000565602 ATF7IPQ6VMQ6 1270 aa23.51■■□□□ 1.35
EDC3-208ENST00000565602 ZNF831Q5JPB2 1677 aa23.51■■□□□ 1.35
EDC3-208ENST00000565602 MVPQ14764 893 aaKnown RBP23.51■■□□□ 1.35
EDC3-208ENST00000565602 GIGYF1O75420 1035 aaPredicted RBP23.5■■□□□ 1.35
EDC3-208ENST00000565602 TRIM27P14373 513 aa23.5■■□□□ 1.35
EDC3-208ENST00000565602 NOB1Q9ULX3 412 aaKnown RBP23.5■■□□□ 1.35
EDC3-208ENST00000565602 PRAMEF22A3QJZ6 481 aa23.49■■□□□ 1.35
EDC3-208ENST00000565602 IPO8O15397 1037 aaKnown RBP23.49■■□□□ 1.35
EDC3-208ENST00000565602 FMNL2Q96PY5 1086 aa23.49■■□□□ 1.35
EDC3-208ENST00000565602 BCL11BQ9C0K0 894 aaPredicted RBP23.49■■□□□ 1.35
EDC3-208ENST00000565602 PTCD1O75127 700 aaKnown RBP23.48■■□□□ 1.35
EDC3-208ENST00000565602 SOS1Q07889 1333 aaPredicted RBP23.48■■□□□ 1.35
EDC3-208ENST00000565602 PALLDQ8WX93 1383 aa23.48■■□□□ 1.35
EDC3-208ENST00000565602 TCERG1O14776 1098 aaKnown RBP23.47■■□□□ 1.35
EDC3-208ENST00000565602 SLC4A9Q96Q91 983 aa23.47■■□□□ 1.35
EDC3-208ENST00000565602 CACNA1FO60840 1977 aa23.47■■□□□ 1.35
EDC3-208ENST00000565602 TRIM37O94972 964 aa23.47■■□□□ 1.35
EDC3-208ENST00000565602 HOXB7P09629 217 aa23.47■■□□□ 1.35
EDC3-208ENST00000565602 MRPL50Q8N5N7 158 aaKnown RBP23.46■■□□□ 1.35
EDC3-208ENST00000565602 COL5A3P25940 1745 aaPredicted RBP23.46■■□□□ 1.35
EDC3-208ENST00000565602 SNRPA1P09661 255 aaKnown RBP23.44■■□□□ 1.34
EDC3-208ENST00000565602 SMARCC1Q92922 1105 aaPredicted RBP23.44■■□□□ 1.34
EDC3-208ENST00000565602 TAF1LQ8IZX4 1826 aa23.44■■□□□ 1.34
EDC3-208ENST00000565602 VSIG10Q8N0Z9 540 aa23.43■■□□□ 1.34
EDC3-208ENST00000565602 RBM42Q9BTD8 480 aaKnown RBP23.43■■□□□ 1.34
EDC3-208ENST00000565602 DDX19BQ9UMR2 479 aa23.43■■□□□ 1.34
EDC3-208ENST00000565602 ARHGAP45Q92619 1136 aa23.42■■□□□ 1.34
EDC3-208ENST00000565602 USP16Q9Y5T5 823 aa23.42■■□□□ 1.34
EDC3-208ENST00000565602 ITPRIPQ8IWB1 547 aa23.41■■□□□ 1.34
EDC3-208ENST00000565602 RGPD3A6NKT7 1758 aaPredicted RBP23.41■■□□□ 1.34
EDC3-208ENST00000565602 RGPD4Q7Z3J3 1758 aa23.41■■□□□ 1.34
EDC3-208ENST00000565602 RREB1Q92766 1687 aa23.41■■□□□ 1.34
EDC3-208ENST00000565602 LOC102724428A0A0B4J2F2 783 aa23.41■■□□□ 1.34
EDC3-208ENST00000565602 SIK1P57059 783 aa23.41■■□□□ 1.34
EDC3-208ENST00000565602 HDGFL1Q5TGJ6 251 aa23.41■■□□□ 1.34
EDC3-208ENST00000565602 TMEM57Q8N5G2 664 aa23.4■■□□□ 1.34
EDC3-208ENST00000565602 NECTIN2Q92692 538 aa23.4■■□□□ 1.34
EDC3-208ENST00000565602 IGHDP01880 384 aa23.39■■□□□ 1.34
EDC3-208ENST00000565602 EIF2S2P20042 333 aaKnown RBP23.39■■□□□ 1.34
EDC3-208ENST00000565602 DNAJC10Q8IXB1 793 aa23.39■■□□□ 1.34
EDC3-208ENST00000565602 MYH14Q7Z406 1995 aaKnown RBP23.39■■□□□ 1.33
EDC3-208ENST00000565602 CCDC30Q5VVM6 783 aa23.38■■□□□ 1.33
EDC3-208ENST00000565602 ITPK1Q13572 414 aa23.37■■□□□ 1.33
EDC3-208ENST00000565602 PCDHB15Q9Y5E8 787 aa23.37■■□□□ 1.33
EDC3-208ENST00000565602 ABCC4O15439 1325 aa23.36■■□□□ 1.33
EDC3-208ENST00000565602 ATP6V1AP38606 617 aa23.36■■□□□ 1.33
EDC3-208ENST00000565602 PDIA6Q15084 440 aa23.36■■□□□ 1.33
EDC3-208ENST00000565602 CHPF2Q9P2E5 772 aa23.36■■□□□ 1.33
EDC3-208ENST00000565602 SKAP1Q86WV1 359 aa23.35■■□□□ 1.33
EDC3-208ENST00000565602 CYP19A1P11511 503 aaPredicted RBP23.34■■□□□ 1.33
EDC3-208ENST00000565602 PROSER3Q2NL68 480 aa23.34■■□□□ 1.33
EDC3-208ENST00000565602 TEX13AQ9BXU3 409 aaPredicted RBP23.34■■□□□ 1.33
EDC3-208ENST00000565602 API5Q9BZZ5 524 aaKnown RBP23.34■■□□□ 1.33
EDC3-208ENST00000565602 KCNQ4P56696 695 aa23.34■■□□□ 1.33
EDC3-208ENST00000565602 SLC4A2P04920 1241 aa23.33■■□□□ 1.33
EDC3-208ENST00000565602 NBPF26B4DH59 902 aa23.32■■□□□ 1.32
EDC3-208ENST00000565602 ANXA1P04083 346 aa23.32■■□□□ 1.32
EDC3-208ENST00000565602 NBPF14Q5TI25 921 aa23.32■■□□□ 1.32
EDC3-208ENST00000565602 NBPF10Q6P3W6 841 aaKnown RBP23.32■■□□□ 1.32
EDC3-208ENST00000565602 G2E3Q7L622 706 aa23.32■■□□□ 1.32
EDC3-208ENST00000565602 LRP10Q7Z4F1 713 aa23.32■■□□□ 1.32
EDC3-208ENST00000565602 NBPF15Q8N660 670 aa23.32■■□□□ 1.32
EDC3-208ENST00000565602 STK31Q9BXU1 1019 aa23.32■■□□□ 1.32
EDC3-208ENST00000565602 PLSCR1O15162 318 aa23.32■■□□□ 1.32
EDC3-208ENST00000565602 APBA3O96018 575 aa23.32■■□□□ 1.32
EDC3-208ENST00000565602 A1BGP04217 495 aa23.32■■□□□ 1.32
EDC3-208ENST00000565602 CHMP4AQ9BY43 222 aa23.32■■□□□ 1.32
EDC3-208ENST00000565602 RWDD1Q9H446 243 aaPredicted RBP23.32■■□□□ 1.32
EDC3-208ENST00000565602 DDX21Q9NR30 783 aaKnown RBP eCLIP23.32■■□□□ 1.32
EDC3-208ENST00000565602 DBF4Q9UBU7 674 aaPredicted RBP23.32■■□□□ 1.32
EDC3-208ENST00000565602 ERBB4Q15303 1308 aa23.31■■□□□ 1.32
EDC3-208ENST00000565602 C4BP0C0L5 1744 aa23.31■■□□□ 1.32
EDC3-208ENST00000565602 PIP4K2AP48426 406 aaPredicted RBP23.31■■□□□ 1.32
EDC3-208ENST00000565602 LINC00116Q8NCU8 138 aa23.31■■□□□ 1.32
EDC3-208ENST00000565602 LRRC4BQ9NT99 713 aa23.31■■□□□ 1.32
EDC3-208ENST00000565602 CCNL1Q9UK58 526 aaPredicted RBP23.31■■□□□ 1.32
EDC3-208ENST00000565602 STARD3NLO95772 234 aa23.3■■□□□ 1.32
EDC3-208ENST00000565602 PROM2Q8N271 834 aa23.3■■□□□ 1.32
EDC3-208ENST00000565602 CHMP4BQ9H444 224 aaKnown RBP23.3■■□□□ 1.32
EDC3-208ENST00000565602 ZBTB40Q9NUA8 1239 aa23.3■■□□□ 1.32
EDC3-208ENST00000565602 PHAXQ9H814 394 aaKnown RBP23.29■■□□□ 1.32
EDC3-208ENST00000565602 N4BP2Q86UW6 1770 aaPredicted RBP23.28■■□□□ 1.32
EDC3-208ENST00000565602 INTS5Q6P9B9 1019 aaKnown RBP23.28■■□□□ 1.32
EDC3-208ENST00000565602 PTPRCP08575 1304 aa23.27■■□□□ 1.32
EDC3-208ENST00000565602 MYL6BP14649 208 aa23.27■■□□□ 1.32
EDC3-208ENST00000565602 CRKLP46109 303 aaKnown RBP23.27■■□□□ 1.32
EDC3-208ENST00000565602 TXNRD1Q16881 649 aa23.27■■□□□ 1.32
EDC3-208ENST00000565602 SLC27A3Q5K4L6 730 aa23.27■■□□□ 1.32
EDC3-208ENST00000565602 ZBTB1Q9Y2K1 713 aa23.27■■□□□ 1.32
EDC3-208ENST00000565602 FLIIQ13045 1269 aa23.26■■□□□ 1.31
EDC3-208ENST00000565602 HDAC1Q13547 482 aaPredicted RBP23.26■■□□□ 1.31
EDC3-208ENST00000565602 HYPKQ9NX55 129 aa23.26■■□□□ 1.31
EDC3-208ENST00000565602 NUP188Q5SRE5 1749 aa23.26■■□□□ 1.31
EDC3-208ENST00000565602 PDE4AP27815 886 aa23.26■■□□□ 1.31
EDC3-208ENST00000565602 CNTNAP4Q9C0A0 1308 aa23.26■■□□□ 1.31
EDC3-208ENST00000565602 UBR3Q6ZT12 1888 aa23.25■■□□□ 1.31
EDC3-208ENST00000565602 CCDC87Q9NVE4 849 aa23.25■■□□□ 1.31
EDC3-208ENST00000565602 ARFGEF2Q9Y6D5 1785 aa23.25■■□□□ 1.31
EDC3-208ENST00000565602 RGS3P49796 1198 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms