RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 ZBTB3Q9H5J0 574 aa4.1□□□□□ -1.75
CHD9-213ENST00000564845 LRRFIP2Q9Y608 721 aaKnown RBP4.1□□□□□ -1.75
CHD9-213ENST00000564845 MST1RQ04912 1400 aa4.09□□□□□ -1.75
CHD9-213ENST00000564845 TAF7Q15545 349 aaPredicted RBP4.09□□□□□ -1.75
CHD9-213ENST00000564845 UPF3BQ9BZI7 483 aaKnown RBP4.09□□□□□ -1.75
CHD9-213ENST00000564845 GCP02774 474 aa4.09□□□□□ -1.75
CHD9-213ENST00000564845 A1BGP04217 495 aa4.09□□□□□ -1.75
CHD9-213ENST00000564845 GSPT1P15170 499 aaKnown RBP4.09□□□□□ -1.75
CHD9-213ENST00000564845 SPG7Q9UQ90 795 aa4.09□□□□□ -1.75
CHD9-213ENST00000564845 NCOA3Q9Y6Q9 1424 aa4.09□□□□□ -1.75
CHD9-213ENST00000564845 IQSEC3Q9UPP2 1182 aaPredicted RBP4.09□□□□□ -1.75
CHD9-213ENST00000564845 BTBD11A6QL63 1104 aa4.09□□□□□ -1.75
CHD9-213ENST00000564845 GPTP24298 496 aa4.09□□□□□ -1.75
CHD9-213ENST00000564845 CCDC27Q2M243 656 aa4.09□□□□□ -1.75
CHD9-213ENST00000564845 CRYBG1Q9Y4K1 1723 aa4.09□□□□□ -1.75
CHD9-213ENST00000564845 MTERF4Q7Z6M4 381 aaKnown RBP4.09□□□□□ -1.75
CHD9-213ENST00000564845 PANK2Q9BZ23 570 aa4.09□□□□□ -1.75
CHD9-213ENST00000564845 USP16Q9Y5T5 823 aa4.09□□□□□ -1.75
CHD9-213ENST00000564845 PAXIP1Q6ZW49 1069 aaPredicted RBP4.09□□□□□ -1.75
CHD9-213ENST00000564845 FEZ1Q99689 392 aa4.09□□□□□ -1.75
CHD9-213ENST00000564845 PI4KAP2A4QPH2 592 aa4.09□□□□□ -1.76
CHD9-213ENST00000564845 ZGPATQ8N5A5 531 aaKnown RBP4.09□□□□□ -1.76
CHD9-213ENST00000564845 PI4KAP1Q8N8J0 262 aa4.09□□□□□ -1.76
CHD9-213ENST00000564845 TAF6LQ9Y6J9 622 aa4.09□□□□□ -1.76
CHD9-213ENST00000564845 MAP2P11137 1827 aaKnown RBP4.09□□□□□ -1.76
CHD9-213ENST00000564845 PDE3BQ13370 1112 aa4.09□□□□□ -1.76
CHD9-213ENST00000564845 USP31Q70CQ4 1352 aa4.09□□□□□ -1.76
CHD9-213ENST00000564845 STK3Q13188 491 aa4.09□□□□□ -1.76
CHD9-213ENST00000564845 ZBTB7BO15156 539 aaPredicted RBP4.08□□□□□ -1.76
CHD9-213ENST00000564845 CT47B1P0C2W7 299 aaPredicted RBP4.08□□□□□ -1.76
CHD9-213ENST00000564845 BRPF1P55201 1214 aaPredicted RBP4.08□□□□□ -1.76
CHD9-213ENST00000564845 NFE2L2Q16236 605 aa4.08□□□□□ -1.76
CHD9-213ENST00000564845 FBXW7Q969H0 707 aa4.08□□□□□ -1.76
CHD9-213ENST00000564845 PIK3C2AO00443 1686 aa4.08□□□□□ -1.76
CHD9-213ENST00000564845 SALL3Q9BXA9 1300 aa4.08□□□□□ -1.76
CHD9-213ENST00000564845 CAMTA1Q9Y6Y1 1673 aa4.08□□□□□ -1.76
CHD9-213ENST00000564845 ANKRD24Q8TF21 1146 aa4.08□□□□□ -1.76
CHD9-213ENST00000564845 LRRC2Q9BYS8 371 aa4.08□□□□□ -1.76
CHD9-213ENST00000564845 PHF8Q9UPP1 1060 aa4.08□□□□□ -1.76
CHD9-213ENST00000564845 TMEM2Q9UHN6 1383 aa4.08□□□□□ -1.76
CHD9-213ENST00000564845 TRIM21P19474 475 aaKnown RBP4.08□□□□□ -1.76
CHD9-213ENST00000564845 MRPL50Q8N5N7 158 aaKnown RBP4.08□□□□□ -1.76
CHD9-213ENST00000564845 HELBQ8NG08 1087 aaPredicted RBP4.08□□□□□ -1.76
CHD9-213ENST00000564845 OS9Q13438 667 aaPredicted RBP4.08□□□□□ -1.76
CHD9-213ENST00000564845 CWC27Q6UX04 472 aaKnown RBP4.08□□□□□ -1.76
CHD9-213ENST00000564845 TOM1L2Q6ZVM7 507 aa4.08□□□□□ -1.76
CHD9-213ENST00000564845 GPATCH3Q96I76 525 aa4.08□□□□□ -1.76
CHD9-213ENST00000564845 SEC62Q99442 399 aaKnown RBP4.08□□□□□ -1.76
CHD9-213ENST00000564845 ZNF530Q6P9A1 599 aaPredicted RBP4.08□□□□□ -1.76
CHD9-213ENST00000564845 CENPQQ7L2Z9 268 aaPredicted RBP4.08□□□□□ -1.76
CHD9-213ENST00000564845 A0A087WWV3 80 aa4.08□□□□□ -1.76
CHD9-213ENST00000564845 TBC1D2Q9BYX2 928 aa4.08□□□□□ -1.76
CHD9-213ENST00000564845 LARP1Q6PKG0 1096 aaKnown RBP4.07□□□□□ -1.76
CHD9-213ENST00000564845 SOS1Q07889 1333 aaPredicted RBP4.07□□□□□ -1.76
CHD9-213ENST00000564845 PI16Q6UXB8 463 aa4.07□□□□□ -1.76
CHD9-213ENST00000564845 CCDC129Q6ZRS4 1044 aa4.07□□□□□ -1.76
CHD9-213ENST00000564845 HEG1Q9ULI3 1381 aa4.07□□□□□ -1.76
CHD9-213ENST00000564845 INCENPQ9NQS7 918 aa4.07□□□□□ -1.76
CHD9-213ENST00000564845 SNRKQ9NRH2 765 aa4.07□□□□□ -1.76
CHD9-213ENST00000564845 CELSR3Q9NYQ7 3312 aa4.07□□□□□ -1.76
CHD9-213ENST00000564845 FER1L4A9Z1Z3 1794 aa4.07□□□□□ -1.76
CHD9-213ENST00000564845 MTMR7Q9Y216 660 aa4.07□□□□□ -1.76
CHD9-213ENST00000564845 TPM4P67936 248 aa4.07□□□□□ -1.76
CHD9-213ENST00000564845 CAVIN1Q6NZI2 390 aaKnown RBP4.07□□□□□ -1.76
CHD9-213ENST00000564845 FAM173BQ6P4H8 233 aa4.07□□□□□ -1.76
CHD9-213ENST00000564845 CHD1LQ86WJ1 897 aa4.07□□□□□ -1.76
CHD9-213ENST00000564845 AATKQ6ZMQ8 1374 aa4.07□□□□□ -1.76
CHD9-213ENST00000564845 KCNQ2O43526 872 aa4.07□□□□□ -1.76
CHD9-213ENST00000564845 DNAJC2Q99543 621 aaKnown RBP4.07□□□□□ -1.76
CHD9-213ENST00000564845 HDGFL1Q5TGJ6 251 aa4.07□□□□□ -1.76
CHD9-213ENST00000564845 TBC1D9Q6ZT07 1266 aa4.07□□□□□ -1.76
CHD9-213ENST00000564845 ANKLE2Q86XL3 938 aa4.07□□□□□ -1.76
CHD9-213ENST00000564845 MAP3K2Q9Y2U5 619 aa4.07□□□□□ -1.76
CHD9-213ENST00000564845 AKAP12Q02952 1782 aa4.07□□□□□ -1.76
CHD9-213ENST00000564845 KDM4FA0A1W2PPD8 638 aa4.07□□□□□ -1.76
CHD9-213ENST00000564845 FAM170AA1A519 330 aa4.07□□□□□ -1.76
CHD9-213ENST00000564845 ISY1Q9ULR0 285 aaKnown RBP4.07□□□□□ -1.76
CHD9-213ENST00000564845 PALD1Q9ULE6 856 aa4.07□□□□□ -1.76
CHD9-213ENST00000564845 NFAT5O94916 1531 aa4.07□□□□□ -1.76
CHD9-213ENST00000564845 RBM27Q9P2N5 1060 aaKnown RBP4.06□□□□□ -1.76
CHD9-213ENST00000564845 EVA1CP58658 441 aa4.06□□□□□ -1.76
CHD9-213ENST00000564845 THEMISQ8N1K5 641 aaPredicted RBP4.06□□□□□ -1.76
CHD9-213ENST00000564845 HOOK1Q9UJC3 728 aaKnown RBP4.06□□□□□ -1.76
CHD9-213ENST00000564845 SCAF8Q9UPN6 1271 aaKnown RBP4.06□□□□□ -1.76
CHD9-213ENST00000564845 SMIM22K7EJ46 135 aa4.06□□□□□ -1.76
CHD9-213ENST00000564845 HMMRO75330 724 aa4.06□□□□□ -1.76
CHD9-213ENST00000564845 TPM3P06753 285 aa4.06□□□□□ -1.76
CHD9-213ENST00000564845 TPM2P07951 284 aa4.06□□□□□ -1.76
CHD9-213ENST00000564845 TTLL7Q6ZT98 887 aa4.06□□□□□ -1.76
CHD9-213ENST00000564845 NSFL1CQ9UNZ2 370 aaKnown RBP4.06□□□□□ -1.76
CHD9-213ENST00000564845 ZBTB40Q9NUA8 1239 aa4.06□□□□□ -1.76
CHD9-213ENST00000564845 TBC1D2BQ9UPU7 963 aa4.06□□□□□ -1.76
CHD9-213ENST00000564845 RGPD2P0DJD1 1756 aa4.06□□□□□ -1.76
CHD9-213ENST00000564845 GNAT3A8MTJ3 354 aa4.06□□□□□ -1.76
CHD9-213ENST00000564845 PLCB2Q00722 1185 aa4.06□□□□□ -1.76
CHD9-213ENST00000564845 TEFQ10587 303 aa4.06□□□□□ -1.76
CHD9-213ENST00000564845 ATF3P18847 181 aa4.06□□□□□ -1.76
CHD9-213ENST00000564845 MYD88Q99836 296 aa4.06□□□□□ -1.76
CHD9-213ENST00000564845 DMDP11532 3685 aa4.06□□□□□ -1.76
CHD9-213ENST00000564845 DEF6Q9H4E7 631 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms