RNA–Protein interactions for RNA: ENST00000563513.1

FANCA-212, Transcript of FA complementation group A, humanhuman

TSL 4

Gene FANCA, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-212ENST00000563513 SOS1Q07889 1333 aaPredicted RBP24.18■■□□□ 1.46
FANCA-212ENST00000563513 STARD3NLO95772 234 aa24.18■■□□□ 1.46
FANCA-212ENST00000563513 EIF2S2P20042 333 aaKnown RBP24.18■■□□□ 1.46
FANCA-212ENST00000563513 A1BGP04217 495 aa24.17■■□□□ 1.46
FANCA-212ENST00000563513 CRKLP46109 303 aaKnown RBP24.17■■□□□ 1.46
FANCA-212ENST00000563513 RC3H1Q5TC82 1133 aaKnown RBP24.17■■□□□ 1.46
FANCA-212ENST00000563513 MYH14Q7Z406 1995 aaKnown RBP24.16■■□□□ 1.46
FANCA-212ENST00000563513 CNTNAP4Q9C0A0 1308 aa24.16■■□□□ 1.46
FANCA-212ENST00000563513 NECTIN2Q92692 538 aa24.16■■□□□ 1.46
FANCA-212ENST00000563513 AKT1S1Q96B36 256 aa24.16■■□□□ 1.46
FANCA-212ENST00000563513 NBPF26B4DH59 902 aa24.15■■□□□ 1.46
FANCA-212ENST00000563513 SOCS7O14512 581 aa24.15■■□□□ 1.46
FANCA-212ENST00000563513 PDIA6Q15084 440 aa24.15■■□□□ 1.46
FANCA-212ENST00000563513 ZNF827Q17R98 1081 aa24.15■■□□□ 1.46
FANCA-212ENST00000563513 HDGFL1Q5TGJ6 251 aa24.15■■□□□ 1.46
FANCA-212ENST00000563513 NBPF14Q5TI25 921 aa24.15■■□□□ 1.46
FANCA-212ENST00000563513 NBPF10Q6P3W6 841 aaKnown RBP24.15■■□□□ 1.46
FANCA-212ENST00000563513 NBPF15Q8N660 670 aa24.15■■□□□ 1.46
FANCA-212ENST00000563513 ZBTB1Q9Y2K1 713 aa24.15■■□□□ 1.46
FANCA-212ENST00000563513 NUP188Q5SRE5 1749 aa24.15■■□□□ 1.46
FANCA-212ENST00000563513 LAMB4A4D0S4 1761 aa24.14■■□□□ 1.46
FANCA-212ENST00000563513 C4BP0C0L5 1744 aa24.14■■□□□ 1.45
FANCA-212ENST00000563513 AMIGO3Q86WK7 504 aa24.14■■□□□ 1.45
FANCA-212ENST00000563513 CCDC87Q9NVE4 849 aa24.14■■□□□ 1.45
FANCA-212ENST00000563513 PIP4K2AP48426 406 aaPredicted RBP24.13■■□□□ 1.45
FANCA-212ENST00000563513 ANO8Q9HCE9 1232 aaPredicted RBP24.13■■□□□ 1.45
FANCA-212ENST00000563513 CT47B1P0C2W7 299 aaPredicted RBP24.12■■□□□ 1.45
FANCA-212ENST00000563513 HMGB2P26583 209 aaKnown RBP24.12■■□□□ 1.45
FANCA-212ENST00000563513 PROSER3Q2NL68 480 aa24.12■■□□□ 1.45
FANCA-212ENST00000563513 SMIM5Q71RC9 77 aa24.12■■□□□ 1.45
FANCA-212ENST00000563513 LRP10Q7Z4F1 713 aa24.12■■□□□ 1.45
FANCA-212ENST00000563513 TCERG1O14776 1098 aaKnown RBP24.11■■□□□ 1.45
FANCA-212ENST00000563513 CHPF2Q9P2E5 772 aa24.11■■□□□ 1.45
FANCA-212ENST00000563513 ERBB4Q15303 1308 aa24.1■■□□□ 1.45
FANCA-212ENST00000563513 RPS6KA4O75676 772 aa24.1■■□□□ 1.45
FANCA-212ENST00000563513 ANXA1P04083 346 aa24.1■■□□□ 1.45
FANCA-212ENST00000563513 CANXP27824 592 aaKnown RBP24.1■■□□□ 1.45
FANCA-212ENST00000563513 CCDC30Q5VVM6 783 aa24.1■■□□□ 1.45
FANCA-212ENST00000563513 EIF5P55010 431 aaKnown RBP24.09■■□□□ 1.45
FANCA-212ENST00000563513 SLC15A2Q16348 729 aa24.09■■□□□ 1.45
FANCA-212ENST00000563513 DDX21Q9NR30 783 aaKnown RBP eCLIP24.09■■□□□ 1.45
FANCA-212ENST00000563513 GNPATO15228 680 aa24.08■■□□□ 1.45
FANCA-212ENST00000563513 IL6STP40189 918 aaPredicted RBP24.08■■□□□ 1.45
FANCA-212ENST00000563513 ZNF428Q96B54 188 aa24.08■■□□□ 1.45
FANCA-212ENST00000563513 AK7Q96M32 723 aa24.08■■□□□ 1.45
FANCA-212ENST00000563513 DBF4Q9UBU7 674 aaPredicted RBP24.08■■□□□ 1.45
FANCA-212ENST00000563513 MYL6BP14649 208 aa24.07■■□□□ 1.44
FANCA-212ENST00000563513 SSH1Q8WYL5 1049 aa24.07■■□□□ 1.44
FANCA-212ENST00000563513 CHMP4AQ9BY43 222 aa24.07■■□□□ 1.44
FANCA-212ENST00000563513 RARSP54136 660 aaKnown RBP24.06■■□□□ 1.44
FANCA-212ENST00000563513 STK32BQ9NY57 414 aa24.06■■□□□ 1.44
FANCA-212ENST00000563513 RTCBQ9Y3I0 505 aaKnown RBP24.06■■□□□ 1.44
FANCA-212ENST00000563513 UBR3Q6ZT12 1888 aa24.05■■□□□ 1.44
FANCA-212ENST00000563513 SLC4A2P04920 1241 aa24.05■■□□□ 1.44
FANCA-212ENST00000563513 ALDH1L2Q3SY69 923 aa24.04■■□□□ 1.44
FANCA-212ENST00000563513 G2E3Q7L622 706 aa24.04■■□□□ 1.44
FANCA-212ENST00000563513 MRPL50Q8N5N7 158 aaKnown RBP24.04■■□□□ 1.44
FANCA-212ENST00000563513 TFCP2L1Q9NZI6 479 aa24.04■■□□□ 1.44
FANCA-212ENST00000563513 ARHGEF1Q92888 912 aaKnown RBP24.03■■□□□ 1.44
FANCA-212ENST00000563513 STK31Q9BXU1 1019 aa24.03■■□□□ 1.44
FANCA-212ENST00000563513 PHAXQ9H814 394 aaKnown RBP24.03■■□□□ 1.44
FANCA-212ENST00000563513 HYPKQ9NX55 129 aa24.03■■□□□ 1.44
FANCA-212ENST00000563513 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.02■■□□□ 1.44
FANCA-212ENST00000563513 SSFA2P28290 1259 aa24.02■■□□□ 1.44
FANCA-212ENST00000563513 TRAPPC3LQ5T215 181 aa24.02■■□□□ 1.44
FANCA-212ENST00000563513 BCL2L13Q9BXK5 485 aa24.02■■□□□ 1.44
FANCA-212ENST00000563513 PNPLA7Q6ZV29 1317 aa24.02■■□□□ 1.44
FANCA-212ENST00000563513 TUBGCP6Q96RT7 1819 aa24.01■■□□□ 1.43
FANCA-212ENST00000563513 PHF14O94880 888 aa24.01■■□□□ 1.43
FANCA-212ENST00000563513 COPS6Q7L5N1 327 aa24.01■■□□□ 1.43
FANCA-212ENST00000563513 COL23A1Q86Y22 540 aaPredicted RBP24.01■■□□□ 1.43
FANCA-212ENST00000563513 XAGE3Q8WTP9 111 aa24.01■■□□□ 1.43
FANCA-212ENST00000563513 COL15A1P39059 1388 aa24.01■■□□□ 1.43
FANCA-212ENST00000563513 BCAR3O75815 825 aa24■■□□□ 1.43
FANCA-212ENST00000563513 ADRA2BP18089 450 aa24■■□□□ 1.43
FANCA-212ENST00000563513 TTLL7Q6ZT98 887 aa24■■□□□ 1.43
FANCA-212ENST00000563513 ZNF330Q9Y3S2 320 aaPredicted RBP24■■□□□ 1.43
FANCA-212ENST00000563513 BRPF1P55201 1214 aaPredicted RBP23.99■■□□□ 1.43
FANCA-212ENST00000563513 TBC1D2BQ9UPU7 963 aa23.99■■□□□ 1.43
FANCA-212ENST00000563513 AIMP1Q12904 312 aaKnown RBP23.98■■□□□ 1.43
FANCA-212ENST00000563513 PDGFDQ9GZP0 370 aaPredicted RBP23.98■■□□□ 1.43
FANCA-212ENST00000563513 SMC4Q9NTJ3 1288 aa23.98■■□□□ 1.43
FANCA-212ENST00000563513 A0A087WZG4 1122 aa23.97■■□□□ 1.43
FANCA-212ENST00000563513 CACNA1FO60840 1977 aa23.97■■□□□ 1.43
FANCA-212ENST00000563513 FLAD1Q8NFF5 587 aa23.97■■□□□ 1.43
FANCA-212ENST00000563513 RCAN3Q9UKA8 241 aa23.97■■□□□ 1.43
FANCA-212ENST00000563513 QSER1Q2KHR3 1735 aa23.96■■□□□ 1.43
FANCA-212ENST00000563513 FLIIQ13045 1269 aa23.96■■□□□ 1.43
FANCA-212ENST00000563513 R3HDM1Q15032 1099 aaKnown RBP23.96■■□□□ 1.43
FANCA-212ENST00000563513 DZIP3Q86Y13 1208 aaKnown RBP23.96■■□□□ 1.43
FANCA-212ENST00000563513 SRP68Q9UHB9 627 aaKnown RBP23.96■■□□□ 1.43
FANCA-212ENST00000563513 NARFQ9UHQ1 456 aa23.96■■□□□ 1.43
FANCA-212ENST00000563513 CAMTA2O94983 1202 aa23.95■■□□□ 1.42
FANCA-212ENST00000563513 RFC4P35249 363 aa23.95■■□□□ 1.42
FANCA-212ENST00000563513 USP42Q9H9J4 1324 aaKnown RBP23.94■■□□□ 1.42
FANCA-212ENST00000563513 BCL2L12Q9HB09 334 aa23.94■■□□□ 1.42
FANCA-212ENST00000563513 C4AP0C0L4 1744 aa23.93■■□□□ 1.42
FANCA-212ENST00000563513 ANKRD13DQ6ZTN6 518 aa23.93■■□□□ 1.42
FANCA-212ENST00000563513 NPM2Q86SE8 214 aaKnown RBP23.93■■□□□ 1.42
FANCA-212ENST00000563513 ARXQ96QS3 562 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms