RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 UTRNP46939 3433 aa25.15■■□□□ 1.62
TRADD-203ENST00000563348 GPR162Q16538 588 aa25.15■■□□□ 1.62
TRADD-203ENST00000563348 CANXP27824 592 aaKnown RBP25.14■■□□□ 1.62
TRADD-203ENST00000563348 ZPR1O75312 459 aa25.13■■□□□ 1.61
TRADD-203ENST00000563348 FKBP8Q14318 412 aa25.13■■□□□ 1.61
TRADD-203ENST00000563348 EIF5P55010 431 aaKnown RBP25.12■■□□□ 1.61
TRADD-203ENST00000563348 NARFQ9UHQ1 456 aa25.12■■□□□ 1.61
TRADD-203ENST00000563348 WDR43Q15061 677 aaKnown RBP eCLIP25.11■■□□□ 1.61
TRADD-203ENST00000563348 USPL1Q5W0Q7 1092 aa25.11■■□□□ 1.61
TRADD-203ENST00000563348 PNISRQ8TF01 805 aaKnown RBP25.11■■□□□ 1.61
TRADD-203ENST00000563348 MIS18AQ9NYP9 233 aa25.11■■□□□ 1.61
TRADD-203ENST00000563348 USP16Q9Y5T5 823 aa25.11■■□□□ 1.61
TRADD-203ENST00000563348 PARP3Q9Y6F1 533 aa25.11■■□□□ 1.61
TRADD-203ENST00000563348 COL15A1P39059 1388 aa25.1■■□□□ 1.61
TRADD-203ENST00000563348 SNRPA1P09661 255 aaKnown RBP25.1■■□□□ 1.61
TRADD-203ENST00000563348 YY1P25490 414 aa25.1■■□□□ 1.61
TRADD-203ENST00000563348 RIPK4P57078 832 aa25.1■■□□□ 1.61
TRADD-203ENST00000563348 PELP1Q8IZL8 1130 aaKnown RBP25.1■■□□□ 1.61
TRADD-203ENST00000563348 A0A087WZG4 1122 aa25.09■■□□□ 1.61
TRADD-203ENST00000563348 A1BGP04217 495 aa25.09■■□□□ 1.61
TRADD-203ENST00000563348 TMPOP42166 694 aaKnown RBP25.09■■□□□ 1.61
TRADD-203ENST00000563348 THUMPD2Q9BTF0 503 aaKnown RBP25.09■■□□□ 1.61
TRADD-203ENST00000563348 ADAMTS8Q9UP79 889 aa25.09■■□□□ 1.61
TRADD-203ENST00000563348 TM4SF1P30408 202 aa25.08■■□□□ 1.61
TRADD-203ENST00000563348 IL6STP40189 918 aaPredicted RBP25.08■■□□□ 1.61
TRADD-203ENST00000563348 C4AP0C0L4 1744 aa25.07■■□□□ 1.6
TRADD-203ENST00000563348 RUNDC1Q96C34 613 aa25.07■■□□□ 1.6
TRADD-203ENST00000563348 PRAMEF22A3QJZ6 481 aa25.06■■□□□ 1.6
TRADD-203ENST00000563348 YBX3P16989 372 aaKnown RBP eCLIP25.06■■□□□ 1.6
TRADD-203ENST00000563348 DDR1Q08345 913 aa25.06■■□□□ 1.6
TRADD-203ENST00000563348 CCDC146Q8IYE0 955 aa25.06■■□□□ 1.6
TRADD-203ENST00000563348 BCL2L12Q9HB09 334 aa25.06■■□□□ 1.6
TRADD-203ENST00000563348 GRIN3BO60391 1043 aa25.05■■□□□ 1.6
TRADD-203ENST00000563348 TGFB2P61812 414 aa25.05■■□□□ 1.6
TRADD-203ENST00000563348 DLG5Q8TDM6 1919 aa25.05■■□□□ 1.6
TRADD-203ENST00000563348 GOLGB1Q14789 3259 aaKnown RBP25.04■■□□□ 1.6
TRADD-203ENST00000563348 POLRMTO00411 1230 aaKnown RBP25.03■■□□□ 1.6
TRADD-203ENST00000563348 LMOD3Q0VAK6 560 aa25.03■■□□□ 1.6
TRADD-203ENST00000563348 RRP7AQ9Y3A4 280 aaKnown RBP25.03■■□□□ 1.6
TRADD-203ENST00000563348 EIF4A1P60842 406 aaKnown RBP25.02■■□□□ 1.6
TRADD-203ENST00000563348 NFIXQ14938 502 aa25.02■■□□□ 1.6
TRADD-203ENST00000563348 NPM2Q86SE8 214 aaKnown RBP25.02■■□□□ 1.6
TRADD-203ENST00000563348 TBC1D2BQ9UPU7 963 aa25.02■■□□□ 1.6
TRADD-203ENST00000563348 ZNF330Q9Y3S2 320 aaPredicted RBP25.02■■□□□ 1.6
TRADD-203ENST00000563348 C10orf71Q711Q0 1435 aa25.02■■□□□ 1.6
TRADD-203ENST00000563348 GIGYF1O75420 1035 aaPredicted RBP25■■□□□ 1.59
TRADD-203ENST00000563348 NEUROD2Q15784 382 aa25■■□□□ 1.59
TRADD-203ENST00000563348 BABAM1Q9NWV8 329 aa24.99■■□□□ 1.59
TRADD-203ENST00000563348 A0A0G2JLW4 131 aa24.98■■□□□ 1.59
TRADD-203ENST00000563348 NBPF26B4DH59 902 aa24.98■■□□□ 1.59
TRADD-203ENST00000563348 PIP4K2AP48426 406 aaPredicted RBP24.98■■□□□ 1.59
TRADD-203ENST00000563348 NBPF10Q6P3W6 841 aaKnown RBP24.98■■□□□ 1.59
TRADD-203ENST00000563348 NBPF15Q8N660 670 aa24.98■■□□□ 1.59
TRADD-203ENST00000563348 TSPYL4Q9UJ04 414 aa24.98■■□□□ 1.59
TRADD-203ENST00000563348 DPEP1P16444 411 aa24.97■■□□□ 1.59
TRADD-203ENST00000563348 TRIM35Q9UPQ4 493 aa24.97■■□□□ 1.59
TRADD-203ENST00000563348 PXDNLA1KZ92 1463 aa24.96■■□□□ 1.59
TRADD-203ENST00000563348 CAMTA2O94983 1202 aa24.96■■□□□ 1.59
TRADD-203ENST00000563348 SERPINB2P05120 415 aa24.96■■□□□ 1.59
TRADD-203ENST00000563348 DZIP3Q86Y13 1208 aaKnown RBP24.96■■□□□ 1.59
TRADD-203ENST00000563348 WWC3Q9ULE0 1092 aa24.96■■□□□ 1.59
TRADD-203ENST00000563348 CCDC184Q52MB2 194 aa24.95■■□□□ 1.58
TRADD-203ENST00000563348 TBC1D9BQ66K14 1250 aa24.95■■□□□ 1.58
TRADD-203ENST00000563348 KIF13BQ9NQT8 1826 aa24.95■■□□□ 1.58
TRADD-203ENST00000563348 BICDL1Q6ZP65 573 aa24.94■■□□□ 1.58
TRADD-203ENST00000563348 ANP32CO43423 234 aa24.93■■□□□ 1.58
TRADD-203ENST00000563348 KCNA3P22001 575 aa24.93■■□□□ 1.58
TRADD-203ENST00000563348 CHL1O00533 1208 aa24.92■■□□□ 1.58
TRADD-203ENST00000563348 KDM3BQ7LBC6 1761 aa24.92■■□□□ 1.58
TRADD-203ENST00000563348 CHD4Q14839 1912 aa24.92■■□□□ 1.58
TRADD-203ENST00000563348 APAF1O14727 1248 aa24.91■■□□□ 1.58
TRADD-203ENST00000563348 CLEC4GQ6UXB4 293 aa24.91■■□□□ 1.58
TRADD-203ENST00000563348 SETDB2Q96T68 719 aa24.9■■□□□ 1.58
TRADD-203ENST00000563348 RGL2O15211 777 aa24.89■■□□□ 1.58
TRADD-203ENST00000563348 PIM2Q9P1W9 311 aa24.89■■□□□ 1.58
TRADD-203ENST00000563348 BCS1LQ9Y276 419 aa24.89■■□□□ 1.58
TRADD-203ENST00000563348 CHRNA5P30532 468 aa24.88■■□□□ 1.57
TRADD-203ENST00000563348 ZNF784Q8NCA9 323 aaPredicted RBP24.88■■□□□ 1.57
TRADD-203ENST00000563348 KIAA1551Q9HCM1 1747 aa24.87■■□□□ 1.57
TRADD-203ENST00000563348 ZNF652Q9Y2D9 606 aa24.87■■□□□ 1.57
TRADD-203ENST00000563348 LAS1LQ9Y4W2 734 aaKnown RBP24.87■■□□□ 1.57
TRADD-203ENST00000563348 N4BP2Q86UW6 1770 aaPredicted RBP24.86■■□□□ 1.57
TRADD-203ENST00000563348 CARMIL3Q8ND23 1372 aa24.86■■□□□ 1.57
TRADD-203ENST00000563348 ERBB4Q15303 1308 aa24.86■■□□□ 1.57
TRADD-203ENST00000563348 NGEFQ8N5V2 710 aa24.85■■□□□ 1.57
TRADD-203ENST00000563348 NRXN2Q9P2S2 1712 aa24.84■■□□□ 1.57
TRADD-203ENST00000563348 MYL6BP14649 208 aa24.84■■□□□ 1.57
TRADD-203ENST00000563348 EIF2S2P20042 333 aaKnown RBP24.84■■□□□ 1.57
TRADD-203ENST00000563348 DALRD3Q5D0E6 543 aaKnown RBP24.84■■□□□ 1.57
TRADD-203ENST00000563348 PRR5LQ6MZQ0 368 aa24.84■■□□□ 1.57
TRADD-203ENST00000563348 CFAP44Q96MT7 982 aa24.84■■□□□ 1.57
TRADD-203ENST00000563348 MRS2Q9HD23 443 aa24.84■■□□□ 1.57
TRADD-203ENST00000563348 SCN7AQ01118 1682 aa24.84■■□□□ 1.57
TRADD-203ENST00000563348 AFDNP55196 1824 aaKnown RBP24.84■■□□□ 1.57
TRADD-203ENST00000563348 HLFQ16534 295 aa24.83■■□□□ 1.57
TRADD-203ENST00000563348 BRIP1Q9BX63 1249 aa24.83■■□□□ 1.57
TRADD-203ENST00000563348 ERVV-1B6SEH8 477 aa24.82■■□□□ 1.56
TRADD-203ENST00000563348 PDIA6Q15084 440 aa24.82■■□□□ 1.56
TRADD-203ENST00000563348 LAMB4A4D0S4 1761 aa24.81■■□□□ 1.56
TRADD-203ENST00000563348 ZNF853P0CG23 659 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms