RNA–Protein interactions for RNA: ENST00000562261.1

KLHDC4-208, Transcript of kelch domain containing 4, humanhuman

TSL 3

Gene KLHDC4, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-208ENST00000562261 U2AF1L5P0DN76 240 aaPredicted RBP20.32■□□□□ 0.84
KLHDC4-208ENST00000562261 U2AF1Q01081 240 aaKnown RBP eCLIP20.32■□□□□ 0.846e-6■□□□□ 8.6
KLHDC4-208ENST00000562261 ZBTB1Q9Y2K1 713 aa20.32■□□□□ 0.84
KLHDC4-208ENST00000562261 COL15A1P39059 1388 aa20.32■□□□□ 0.84
KLHDC4-208ENST00000562261 CEMIPQ8WUJ3 1361 aa20.32■□□□□ 0.84
KLHDC4-208ENST00000562261 ZPR1O75312 459 aa20.31■□□□□ 0.84
KLHDC4-208ENST00000562261 USPL1Q5W0Q7 1092 aa20.31■□□□□ 0.84
KLHDC4-208ENST00000562261 ZNF790Q6PG37 636 aa20.31■□□□□ 0.84
KLHDC4-208ENST00000562261 A0A0G2JLW4 131 aa20.3■□□□□ 0.84
KLHDC4-208ENST00000562261 DDR1Q08345 913 aa20.3■□□□□ 0.84
KLHDC4-208ENST00000562261 BRCA1P38398 1863 aaKnown RBP20.29■□□□□ 0.84
KLHDC4-208ENST00000562261 FCHSD2O94868 740 aa20.29■□□□□ 0.84
KLHDC4-208ENST00000562261 STARD3NLO95772 234 aa20.29■□□□□ 0.84
KLHDC4-208ENST00000562261 ZNF496Q96IT1 587 aaPredicted RBP20.29■□□□□ 0.84
KLHDC4-208ENST00000562261 HEG1Q9ULI3 1381 aa20.29■□□□□ 0.84
KLHDC4-208ENST00000562261 DPEP1P16444 411 aa20.28■□□□□ 0.84
KLHDC4-208ENST00000562261 TM4SF1P30408 202 aa20.28■□□□□ 0.84
KLHDC4-208ENST00000562261 NARFQ9UHQ1 456 aa20.28■□□□□ 0.84
KLHDC4-208ENST00000562261 POLRMTO00411 1230 aaKnown RBP20.27■□□□□ 0.84
KLHDC4-208ENST00000562261 KIF3CO14782 793 aa20.27■□□□□ 0.84
KLHDC4-208ENST00000562261 BCS1LQ9Y276 419 aa20.27■□□□□ 0.84
KLHDC4-208ENST00000562261 CANXP27824 592 aaKnown RBP20.26■□□□□ 0.83
KLHDC4-208ENST00000562261 APLP1P51693 650 aa20.26■□□□□ 0.83
KLHDC4-208ENST00000562261 TEX13AQ9BXU3 409 aaPredicted RBP20.26■□□□□ 0.83
KLHDC4-208ENST00000562261 BTBD11A6QL63 1104 aa20.25■□□□□ 0.83
KLHDC4-208ENST00000562261 FMNL2Q96PY5 1086 aa20.25■□□□□ 0.83
KLHDC4-208ENST00000562261 KCNA3P22001 575 aa20.24■□□□□ 0.83
KLHDC4-208ENST00000562261 EIF5P55010 431 aaKnown RBP20.24■□□□□ 0.83
KLHDC4-208ENST00000562261 RTF1Q92541 710 aaKnown RBP20.24■□□□□ 0.83
KLHDC4-208ENST00000562261 BCL2L12Q9HB09 334 aa20.24■□□□□ 0.83
KLHDC4-208ENST00000562261 AFDNP55196 1824 aaKnown RBP20.24■□□□□ 0.83
KLHDC4-208ENST00000562261 KCNQ3O43525 872 aa20.23■□□□□ 0.83
KLHDC4-208ENST00000562261 NFIXQ14938 502 aa20.23■□□□□ 0.83
KLHDC4-208ENST00000562261 MCM10Q7L590 875 aa20.23■□□□□ 0.83
KLHDC4-208ENST00000562261 NRXN2Q9P2S2 1712 aa20.23■□□□□ 0.83
KLHDC4-208ENST00000562261 ARFGEF1Q9Y6D6 1849 aa20.23■□□□□ 0.83
KLHDC4-208ENST00000562261 A0A087WZG4 1122 aa20.22■□□□□ 0.83
KLHDC4-208ENST00000562261 CAPN15O75808 1086 aa20.22■□□□□ 0.83
KLHDC4-208ENST00000562261 DNAJC5GQ8N7S2 189 aa20.22■□□□□ 0.83
KLHDC4-208ENST00000562261 HTATSF1O43719 755 aaKnown RBP20.21■□□□□ 0.83
KLHDC4-208ENST00000562261 PIM2Q9P1W9 311 aa20.21■□□□□ 0.83
KLHDC4-208ENST00000562261 SCN7AQ01118 1682 aa20.21■□□□□ 0.83
KLHDC4-208ENST00000562261 CHRNA5P30532 468 aa20.19■□□□□ 0.82
KLHDC4-208ENST00000562261 IL6STP40189 918 aaPredicted RBP20.19■□□□□ 0.82
KLHDC4-208ENST00000562261 DCTN1Q14203 1278 aa20.19■□□□□ 0.82
KLHDC4-208ENST00000562261 A1BGP04217 495 aa20.18■□□□□ 0.82
KLHDC4-208ENST00000562261 SERPINB2P05120 415 aa20.18■□□□□ 0.82
KLHDC4-208ENST00000562261 NEFMP07197 916 aa20.18■□□□□ 0.82
KLHDC4-208ENST00000562261 DALRD3Q5D0E6 543 aaKnown RBP20.18■□□□□ 0.82
KLHDC4-208ENST00000562261 ARHGAP27Q6ZUM4 889 aa20.18■□□□□ 0.82
KLHDC4-208ENST00000562261 ZNF330Q9Y3S2 320 aaPredicted RBP20.18■□□□□ 0.82
KLHDC4-208ENST00000562261 DLG5Q8TDM6 1919 aa20.17■□□□□ 0.82
KLHDC4-208ENST00000562261 TOMM70O94826 608 aa20.17■□□□□ 0.82
KLHDC4-208ENST00000562261 COL13A1Q5TAT6 717 aaPredicted RBP20.17■□□□□ 0.82
KLHDC4-208ENST00000562261 BICDL1Q6ZP65 573 aa20.16■□□□□ 0.82
KLHDC4-208ENST00000562261 NPM2Q86SE8 214 aaKnown RBP20.16■□□□□ 0.82
KLHDC4-208ENST00000562261 PLEKHF1Q96S99 279 aa20.16■□□□□ 0.82
KLHDC4-208ENST00000562261 TBC1D2BQ9UPU7 963 aa20.16■□□□□ 0.82
KLHDC4-208ENST00000562261 USP16Q9Y5T5 823 aa20.16■□□□□ 0.82
KLHDC4-208ENST00000562261 DLEC1Q9Y238 1755 aa20.16■□□□□ 0.82
KLHDC4-208ENST00000562261 PRAMEF22A3QJZ6 481 aa20.15■□□□□ 0.82
KLHDC4-208ENST00000562261 SNRPA1P09661 255 aaKnown RBP20.15■□□□□ 0.82
KLHDC4-208ENST00000562261 TBC1D9BQ66K14 1250 aa20.15■□□□□ 0.82
KLHDC4-208ENST00000562261 BCORQ6W2J9 1755 aa20.15■□□□□ 0.82
KLHDC4-208ENST00000562261 CARMIL3Q8ND23 1372 aa20.14■□□□□ 0.81
KLHDC4-208ENST00000562261 TAF7Q15545 349 aaPredicted RBP20.14■□□□□ 0.81
KLHDC4-208ENST00000562261 CAMTA2O94983 1202 aa20.13■□□□□ 0.81
KLHDC4-208ENST00000562261 RALBP1Q15311 655 aa20.13■□□□□ 0.81
KLHDC4-208ENST00000562261 ZEB1P37275 1124 aaPredicted RBP20.12■□□□□ 0.81
KLHDC4-208ENST00000562261 PIP4K2AP48426 406 aaPredicted RBP20.12■□□□□ 0.81
KLHDC4-208ENST00000562261 DZIP3Q86Y13 1208 aaKnown RBP20.12■□□□□ 0.81
KLHDC4-208ENST00000562261 PNNQ9H307 717 aaKnown RBP20.12■□□□□ 0.81
KLHDC4-208ENST00000562261 KDM3BQ7LBC6 1761 aa20.11■□□□□ 0.81
KLHDC4-208ENST00000562261 HTRA3P83110 453 aa20.11■□□□□ 0.81
KLHDC4-208ENST00000562261 NFE2L2Q16236 605 aa20.11■□□□□ 0.81
KLHDC4-208ENST00000562261 LAMB4A4D0S4 1761 aa20.11■□□□□ 0.81
KLHDC4-208ENST00000562261 MAPK8IP3Q9UPT6 1336 aa20.1■□□□□ 0.81
KLHDC4-208ENST00000562261 ANKRD31Q8N7Z5 1873 aa20.1■□□□□ 0.81
KLHDC4-208ENST00000562261 DDX10Q13206 875 aaKnown RBP20.1■□□□□ 0.81
KLHDC4-208ENST00000562261 MIS18AQ9NYP9 233 aa20.1■□□□□ 0.81
KLHDC4-208ENST00000562261 C9orf131Q5VYM1 1079 aa20.09■□□□□ 0.81
KLHDC4-208ENST00000562261 PRR5LQ6MZQ0 368 aa20.09■□□□□ 0.81
KLHDC4-208ENST00000562261 C2CD5Q86YS7 1000 aa20.09■□□□□ 0.81
KLHDC4-208ENST00000562261 TNS4Q8IZW8 715 aa20.09■□□□□ 0.81
KLHDC4-208ENST00000562261 PNISRQ8TF01 805 aaKnown RBP20.09■□□□□ 0.81
KLHDC4-208ENST00000562261 NMRK2Q9NPI5 230 aa20.09■□□□□ 0.81
KLHDC4-208ENST00000562261 H0YIN7 160 aa20.08■□□□□ 0.81
KLHDC4-208ENST00000562261 TTLL6Q8N841 843 aa20.08■□□□□ 0.81
KLHDC4-208ENST00000562261 KLRG1Q96E93 195 aa20.08■□□□□ 0.81
KLHDC4-208ENST00000562261 SETDB2Q96T68 719 aa20.08■□□□□ 0.81
KLHDC4-208ENST00000562261 SBF1O95248 1867 aa20.07■□□□□ 0.8
KLHDC4-208ENST00000562261 NBPF26B4DH59 902 aa20.07■□□□□ 0.8
KLHDC4-208ENST00000562261 NBPF10Q6P3W6 841 aaKnown RBP20.07■□□□□ 0.8
KLHDC4-208ENST00000562261 NBPF15Q8N660 670 aa20.07■□□□□ 0.8
KLHDC4-208ENST00000562261 THUMPD2Q9BTF0 503 aaKnown RBP20.07■□□□□ 0.8
KLHDC4-208ENST00000562261 BRIP1Q9BX63 1249 aa20.07■□□□□ 0.8
KLHDC4-208ENST00000562261 COL11A2P13942 1736 aaPredicted RBP20.06■□□□□ 0.8
KLHDC4-208ENST00000562261 PDE6BP35913 854 aa20.06■□□□□ 0.8
KLHDC4-208ENST00000562261 CLEC4GQ6UXB4 293 aa20.06■□□□□ 0.8
KLHDC4-208ENST00000562261 CNBD1Q8NA66 436 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms