RNA–Protein interactions for RNA: ENST00000562219.1

BBS4-205, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-205ENST00000562219 CHRNA5P30532 468 aa13.97□□□□□ -0.17
BBS4-205ENST00000562219 AMER1Q5JTC6 1135 aaPredicted RBP13.97□□□□□ -0.17
BBS4-205ENST00000562219 DNAJC10Q8IXB1 793 aa13.97□□□□□ -0.17
BBS4-205ENST00000562219 RBM46Q8TBY0 533 aaKnown RBP13.97□□□□□ -0.17
BBS4-205ENST00000562219 DICER1Q9UPY3 1922 aaKnown RBP13.97□□□□□ -0.17
BBS4-205ENST00000562219 KDM2BQ8NHM5 1336 aa13.96□□□□□ -0.17
BBS4-205ENST00000562219 CACNA1SQ13698 1873 aa13.96□□□□□ -0.17
BBS4-205ENST00000562219 TM4SF1P30408 202 aa13.96□□□□□ -0.17
BBS4-205ENST00000562219 USPL1Q5W0Q7 1092 aa13.96□□□□□ -0.17
BBS4-205ENST00000562219 C16orf71Q8IYS4 520 aaPredicted RBP13.96□□□□□ -0.17
BBS4-205ENST00000562219 RNF181Q9P0P0 153 aa13.96□□□□□ -0.17
BBS4-205ENST00000562219 CYP19A1P11511 503 aaPredicted RBP13.95□□□□□ -0.18
BBS4-205ENST00000562219 DNAJC5GQ8N7S2 189 aa13.95□□□□□ -0.18
BBS4-205ENST00000562219 LGR6Q9HBX8 967 aa13.95□□□□□ -0.18
BBS4-205ENST00000562219 COL11A2P13942 1736 aaPredicted RBP13.95□□□□□ -0.18
BBS4-205ENST00000562219 RNMTO43148 476 aaKnown RBP13.94□□□□□ -0.18
BBS4-205ENST00000562219 HMOX1P09601 288 aa13.94□□□□□ -0.18
BBS4-205ENST00000562219 SLC39A6Q13433 755 aa13.94□□□□□ -0.18
BBS4-205ENST00000562219 NARFQ9UHQ1 456 aa13.94□□□□□ -0.18
BBS4-205ENST00000562219 BCORQ6W2J9 1755 aa13.94□□□□□ -0.18
BBS4-205ENST00000562219 ZC3H4Q9UPT8 1303 aaKnown RBP13.93□□□□□ -0.18
BBS4-205ENST00000562219 FER1L6Q2WGJ9 1857 aa13.93□□□□□ -0.18
BBS4-205ENST00000562219 FSTL1Q12841 308 aa13.93□□□□□ -0.18
BBS4-205ENST00000562219 NFIXQ14938 502 aa13.93□□□□□ -0.18
BBS4-205ENST00000562219 VSIG10Q8N0Z9 540 aa13.93□□□□□ -0.18
BBS4-205ENST00000562219 ZBTB1Q9Y2K1 713 aa13.93□□□□□ -0.18
BBS4-205ENST00000562219 ARFGEF2Q9Y6D5 1785 aa13.93□□□□□ -0.18
BBS4-205ENST00000562219 COL3A1P02461 1466 aaPredicted RBP13.93□□□□□ -0.18
BBS4-205ENST00000562219 KIF7Q2M1P5 1343 aa13.92□□□□□ -0.18
BBS4-205ENST00000562219 MTHFSDQ2M296 383 aaKnown RBP13.92□□□□□ -0.18
BBS4-205ENST00000562219 DIAPH1O60610 1272 aaKnown RBP13.91□□□□□ -0.18
BBS4-205ENST00000562219 SERPINB2P05120 415 aa13.9□□□□□ -0.18
BBS4-205ENST00000562219 RASSF7Q02833 373 aa13.9□□□□□ -0.18
BBS4-205ENST00000562219 CCER1Q8TC90 406 aaPredicted RBP13.9□□□□□ -0.18
BBS4-205ENST00000562219 BCL2L12Q9HB09 334 aa13.9□□□□□ -0.18
BBS4-205ENST00000562219 RRAGCQ9HB90 399 aa13.9□□□□□ -0.18
BBS4-205ENST00000562219 CARMIL3Q8ND23 1372 aa13.9□□□□□ -0.18
BBS4-205ENST00000562219 LMNB1P20700 586 aa13.89□□□□□ -0.19
BBS4-205ENST00000562219 TTC5Q8N0Z6 440 aa13.89□□□□□ -0.19
BBS4-205ENST00000562219 KLRG1Q96E93 195 aa13.89□□□□□ -0.19
BBS4-205ENST00000562219 STARD3NLO95772 234 aa13.88□□□□□ -0.19
BBS4-205ENST00000562219 CANXP27824 592 aaKnown RBP13.88□□□□□ -0.19
BBS4-205ENST00000562219 HTRA3P83110 453 aa13.88□□□□□ -0.19
BBS4-205ENST00000562219 CC2D1BQ5T0F9 858 aaKnown RBP13.88□□□□□ -0.19
BBS4-205ENST00000562219 TTLL6Q8N841 843 aa13.88□□□□□ -0.19
BBS4-205ENST00000562219 SMC1BQ8NDV3 1235 aa13.88□□□□□ -0.19
BBS4-205ENST00000562219 PCNTO95613 3336 aa13.88□□□□□ -0.19
BBS4-205ENST00000562219 A0A087WZG4 1122 aa13.87□□□□□ -0.19
BBS4-205ENST00000562219 PER1O15534 1290 aaPredicted RBP13.87□□□□□ -0.19
BBS4-205ENST00000562219 EIF5P55010 431 aaKnown RBP13.87□□□□□ -0.19
BBS4-205ENST00000562219 C2CD5Q86YS7 1000 aa13.87□□□□□ -0.19
BBS4-205ENST00000562219 JMYQ8N9B5 988 aa13.87□□□□□ -0.19
BBS4-205ENST00000562219 SLX4Q8IY92 1834 aa13.87□□□□□ -0.19
BBS4-205ENST00000562219 NPC1L1Q9UHC9 1359 aa13.86□□□□□ -0.19
BBS4-205ENST00000562219 HEG1Q9ULI3 1381 aa13.86□□□□□ -0.19
BBS4-205ENST00000562219 GLTPD2A6NH11 291 aa13.86□□□□□ -0.19
BBS4-205ENST00000562219 H0YIN7 160 aa13.86□□□□□ -0.19
BBS4-205ENST00000562219 PRELPP51888 382 aa13.86□□□□□ -0.19
BBS4-205ENST00000562219 VEGFAP15692 232 aaPredicted RBP13.85□□□□□ -0.19
BBS4-205ENST00000562219 TEFQ10587 303 aa13.85□□□□□ -0.19
BBS4-205ENST00000562219 ZNF790Q6PG37 636 aa13.85□□□□□ -0.19
BBS4-205ENST00000562219 BICDL1Q6ZP65 573 aa13.85□□□□□ -0.19
BBS4-205ENST00000562219 GAS2L2Q8NHY3 880 aa13.85□□□□□ -0.19
BBS4-205ENST00000562219 ZNF496Q96IT1 587 aaPredicted RBP13.85□□□□□ -0.19
BBS4-205ENST00000562219 GNAT3A8MTJ3 354 aa13.84□□□□□ -0.19
BBS4-205ENST00000562219 NFKBIEO00221 500 aa13.84□□□□□ -0.19
BBS4-205ENST00000562219 TBC1D9BQ66K14 1250 aa13.84□□□□□ -0.19
BBS4-205ENST00000562219 TEX13AQ9BXU3 409 aaPredicted RBP13.84□□□□□ -0.19
BBS4-205ENST00000562219 PDZRN3Q9UPQ7 1066 aa13.84□□□□□ -0.19
BBS4-205ENST00000562219 CEMIPQ8WUJ3 1361 aa13.83□□□□□ -0.19
BBS4-205ENST00000562219 U2SURPO15042 1029 aaKnown RBP13.83□□□□□ -0.2
BBS4-205ENST00000562219 PDE6BP35913 854 aa13.83□□□□□ -0.2
BBS4-205ENST00000562219 IL6STP40189 918 aaPredicted RBP13.83□□□□□ -0.2
BBS4-205ENST00000562219 IL17REQ8NFR9 667 aa13.83□□□□□ -0.2
BBS4-205ENST00000562219 ZNF330Q9Y3S2 320 aaPredicted RBP13.83□□□□□ -0.2
BBS4-205ENST00000562219 LAMB4A4D0S4 1761 aa13.83□□□□□ -0.2
BBS4-205ENST00000562219 PRR5LQ6MZQ0 368 aa13.82□□□□□ -0.2
BBS4-205ENST00000562219 BRIP1Q9BX63 1249 aa13.82□□□□□ -0.2
BBS4-205ENST00000562219 SCN4AP35499 1836 aa13.82□□□□□ -0.2
BBS4-205ENST00000562219 ZNF622Q969S3 477 aaKnown RBP eCLIP13.81□□□□□ -0.23e-7■■□□□ 11.7
BBS4-205ENST00000562219 FMNL2Q96PY5 1086 aa13.81□□□□□ -0.2
BBS4-205ENST00000562219 TBC1D2BQ9UPU7 963 aa13.81□□□□□ -0.2
BBS4-205ENST00000562219 DLG5Q8TDM6 1919 aa13.8□□□□□ -0.2
BBS4-205ENST00000562219 NPM2Q86SE8 214 aaKnown RBP13.8□□□□□ -0.2
BBS4-205ENST00000562219 CNBD1Q8NA66 436 aa13.8□□□□□ -0.2
BBS4-205ENST00000562219 C21orf2O43822 256 aa13.79□□□□□ -0.2
BBS4-205ENST00000562219 CAMTA2O94983 1202 aa13.79□□□□□ -0.2
BBS4-205ENST00000562219 ERFEQ4G0M1 354 aa13.79□□□□□ -0.2
BBS4-205ENST00000562219 COL13A1Q5TAT6 717 aaPredicted RBP13.79□□□□□ -0.2
BBS4-205ENST00000562219 DPY19L2Q6NUT2 758 aa13.79□□□□□ -0.2
BBS4-205ENST00000562219 SETDB2Q96T68 719 aa13.79□□□□□ -0.2
BBS4-205ENST00000562219 TAOK3Q9H2K8 898 aa13.79□□□□□ -0.2
BBS4-205ENST00000562219 LTBP3Q9NS15 1303 aa13.79□□□□□ -0.2
BBS4-205ENST00000562219 BTBD11A6QL63 1104 aa13.78□□□□□ -0.2
BBS4-205ENST00000562219 POTECB2RU33 542 aa13.78□□□□□ -0.2
BBS4-205ENST00000562219 NPHP1O15259 732 aa13.78□□□□□ -0.2
BBS4-205ENST00000562219 A1BGP04217 495 aa13.78□□□□□ -0.2
BBS4-205ENST00000562219 ST5P78524 1137 aa13.78□□□□□ -0.2
BBS4-205ENST00000562219 CCDC24Q8N4L8 307 aa13.78□□□□□ -0.2
BBS4-205ENST00000562219 PRKAR2BP31323 418 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 151.1 ms