RNA–Protein interactions for RNA: ENST00000562038.1

LINC01963-201, Transcript of long intergenic non-protein coding RNA 1963, humanhuman

BASIC

Gene LINC01963, Length 3,148 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01963-201ENST00000562038 RUNDC1Q96C34 613 aa7.47□□□□□ -1.21
LINC01963-201ENST00000562038 MARCH10Q8NA82 808 aaPredicted RBP7.46□□□□□ -1.21
LINC01963-201ENST00000562038 SMC1BQ8NDV3 1235 aa7.46□□□□□ -1.21
LINC01963-201ENST00000562038 NLRP2Q9NX02 1062 aa7.46□□□□□ -1.21
LINC01963-201ENST00000562038 NFE2L2Q16236 605 aa7.46□□□□□ -1.22
LINC01963-201ENST00000562038 CNTNAP4Q9C0A0 1308 aa7.46□□□□□ -1.22
LINC01963-201ENST00000562038 PDE3BQ13370 1112 aa7.45□□□□□ -1.22
LINC01963-201ENST00000562038 CC2D1BQ5T0F9 858 aaKnown RBP7.45□□□□□ -1.22
LINC01963-201ENST00000562038 RC3H1Q5TC82 1133 aaKnown RBP7.45□□□□□ -1.22
LINC01963-201ENST00000562038 POLD1P28340 1107 aa7.45□□□□□ -1.22
LINC01963-201ENST00000562038 DDX10Q13206 875 aaKnown RBP7.45□□□□□ -1.22
LINC01963-201ENST00000562038 CYP27B1O15528 508 aa7.44□□□□□ -1.22
LINC01963-201ENST00000562038 CCDC136Q96JN2 1154 aa7.44□□□□□ -1.22
LINC01963-201ENST00000562038 GNAT3A8MTJ3 354 aa7.44□□□□□ -1.22
LINC01963-201ENST00000562038 TEX13AQ9BXU3 409 aaPredicted RBP7.44□□□□□ -1.22
LINC01963-201ENST00000562038 STRN4Q9NRL3 753 aa7.44□□□□□ -1.22
LINC01963-201ENST00000562038 TRPM7Q96QT4 1865 aa7.44□□□□□ -1.22
LINC01963-201ENST00000562038 ZNF521Q96K83 1311 aa7.43□□□□□ -1.22
LINC01963-201ENST00000562038 RNMTO43148 476 aaKnown RBP7.43□□□□□ -1.22
LINC01963-201ENST00000562038 CT47B1P0C2W7 299 aaPredicted RBP7.43□□□□□ -1.22
LINC01963-201ENST00000562038 BRD2P25440 801 aaKnown RBP7.43□□□□□ -1.22
LINC01963-201ENST00000562038 WDR63Q8IWG1 891 aa7.43□□□□□ -1.22
LINC01963-201ENST00000562038 FLAD1Q8NFF5 587 aa7.43□□□□□ -1.22
LINC01963-201ENST00000562038 SLC52A2Q9HAB3 445 aa7.43□□□□□ -1.22
LINC01963-201ENST00000562038 CAPN15O75808 1086 aa7.43□□□□□ -1.22
LINC01963-201ENST00000562038 NEFMP07197 916 aa7.43□□□□□ -1.22
LINC01963-201ENST00000562038 C1orf141Q5JVX7 400 aa7.43□□□□□ -1.22
LINC01963-201ENST00000562038 SULT6B1Q6IMI4 303 aa7.43□□□□□ -1.22
LINC01963-201ENST00000562038 ZNF428Q96B54 188 aa7.43□□□□□ -1.22
LINC01963-201ENST00000562038 CREBZFQ9NS37 354 aa7.43□□□□□ -1.22
LINC01963-201ENST00000562038 ZNF853P0CG23 659 aa7.42□□□□□ -1.22
LINC01963-201ENST00000562038 TXNRD1Q16881 649 aa7.42□□□□□ -1.22
LINC01963-201ENST00000562038 IFT57Q9NWB7 429 aa7.41□□□□□ -1.22
LINC01963-201ENST00000562038 WDR43Q15061 677 aaKnown RBP eCLIP7.41□□□□□ -1.22
LINC01963-201ENST00000562038 WBP1LQ9NX94 342 aa7.41□□□□□ -1.22
LINC01963-201ENST00000562038 ZBTB7AO95365 584 aa7.41□□□□□ -1.22
LINC01963-201ENST00000562038 MTHFSDQ2M296 383 aaKnown RBP7.41□□□□□ -1.22
LINC01963-201ENST00000562038 ZNF530Q6P9A1 599 aaPredicted RBP7.41□□□□□ -1.22
LINC01963-201ENST00000562038 MAPK8IP3Q9UPT6 1336 aa7.4□□□□□ -1.22
LINC01963-201ENST00000562038 PALLDQ8WX93 1383 aa7.4□□□□□ -1.22
LINC01963-201ENST00000562038 PRKAR2BP31323 418 aa7.4□□□□□ -1.22
LINC01963-201ENST00000562038 MNX1P50219 401 aaPredicted RBP7.4□□□□□ -1.22
LINC01963-201ENST00000562038 TAF7LQ5H9L4 462 aa7.4□□□□□ -1.22
LINC01963-201ENST00000562038 RNF123Q5XPI4 1314 aa7.4□□□□□ -1.22
LINC01963-201ENST00000562038 PNPLA7Q6ZV29 1317 aa7.4□□□□□ -1.22
LINC01963-201ENST00000562038 HSPA8P11142 646 aaKnown RBP7.4□□□□□ -1.23
LINC01963-201ENST00000562038 POLR3GLQ9BT43 218 aa7.4□□□□□ -1.23
LINC01963-201ENST00000562038 CDK11BP21127 795 aaKnown RBP7.39□□□□□ -1.23
LINC01963-201ENST00000562038 TMPOP42166 694 aaKnown RBP7.39□□□□□ -1.23
LINC01963-201ENST00000562038 LRRC37AA6NMS7 1700 aa7.39□□□□□ -1.23
LINC01963-201ENST00000562038 DDX60Q8IY21 1712 aaKnown RBP7.39□□□□□ -1.23
LINC01963-201ENST00000562038 BRPF1P55201 1214 aaPredicted RBP7.39□□□□□ -1.23
LINC01963-201ENST00000562038 CCDC9Q9Y3X0 531 aaKnown RBP7.39□□□□□ -1.23
LINC01963-201ENST00000562038 MYH14Q7Z406 1995 aaKnown RBP7.39□□□□□ -1.23
LINC01963-201ENST00000562038 AEBP1Q8IUX7 1158 aa7.38□□□□□ -1.23
LINC01963-201ENST00000562038 TMOD3Q9NYL9 352 aa7.38□□□□□ -1.23
LINC01963-201ENST00000562038 CHL1O00533 1208 aa7.38□□□□□ -1.23
LINC01963-201ENST00000562038 U2AF1L5P0DN76 240 aaPredicted RBP7.38□□□□□ -1.23
LINC01963-201ENST00000562038 SSFA2P28290 1259 aa7.38□□□□□ -1.23
LINC01963-201ENST00000562038 U2AF1Q01081 240 aaKnown RBP eCLIP7.38□□□□□ -1.23
LINC01963-201ENST00000562038 IGSF5Q9NSI5 407 aa7.38□□□□□ -1.23
LINC01963-201ENST00000562038 ARIH1Q9Y4X5 557 aaPredicted RBP7.38□□□□□ -1.23
LINC01963-201ENST00000562038 KDM2BQ8NHM5 1336 aa7.38□□□□□ -1.23
LINC01963-201ENST00000562038 A0A087WZG4 1122 aa7.38□□□□□ -1.23
LINC01963-201ENST00000562038 TRMT2AQ8IZ69 625 aaKnown RBP7.38□□□□□ -1.23
LINC01963-201ENST00000562038 FER1L6Q2WGJ9 1857 aa7.37□□□□□ -1.23
LINC01963-201ENST00000562038 FOXN1O15353 648 aa7.37□□□□□ -1.23
LINC01963-201ENST00000562038 FGD1P98174 961 aa7.37□□□□□ -1.23
LINC01963-201ENST00000562038 TAF7Q15545 349 aaPredicted RBP7.37□□□□□ -1.23
LINC01963-201ENST00000562038 NUP98P52948 1817 aa7.37□□□□□ -1.23
LINC01963-201ENST00000562038 KAT6BQ8WYB5 2073 aa7.37□□□□□ -1.23
LINC01963-201ENST00000562038 DUOX1Q9NRD9 1551 aa7.37□□□□□ -1.23
LINC01963-201ENST00000562038 NECTIN2Q92692 538 aa7.37□□□□□ -1.23
LINC01963-201ENST00000562038 PDZRN3Q9UPQ7 1066 aa7.37□□□□□ -1.23
LINC01963-201ENST00000562038 GNAI1P63096 354 aa7.36□□□□□ -1.23
LINC01963-201ENST00000562038 NLGN2Q8NFZ4 835 aa7.36□□□□□ -1.23
LINC01963-201ENST00000562038 PDGFDQ9GZP0 370 aaPredicted RBP7.36□□□□□ -1.23
LINC01963-201ENST00000562038 ATG3Q9NT62 314 aa7.36□□□□□ -1.23
LINC01963-201ENST00000562038 TRIM35Q9UPQ4 493 aa7.36□□□□□ -1.23
LINC01963-201ENST00000562038 COL15A1P39059 1388 aa7.36□□□□□ -1.23
LINC01963-201ENST00000562038 PASKQ96RG2 1323 aa7.36□□□□□ -1.23
LINC01963-201ENST00000562038 IL17REQ8NFR9 667 aa7.36□□□□□ -1.23
LINC01963-201ENST00000562038 PIGBQ92521 554 aa7.36□□□□□ -1.23
LINC01963-201ENST00000562038 RTF1Q92541 710 aaKnown RBP7.36□□□□□ -1.23
LINC01963-201ENST00000562038 ATF5Q9Y2D1 282 aaPredicted RBP7.36□□□□□ -1.23
LINC01963-201ENST00000562038 AFDNP55196 1824 aaKnown RBP7.36□□□□□ -1.23
LINC01963-201ENST00000562038 CABP4P57796 275 aa7.36□□□□□ -1.23
LINC01963-201ENST00000562038 ADAMTS8Q9UP79 889 aa7.36□□□□□ -1.23
LINC01963-201ENST00000562038 NPM3O75607 178 aaKnown RBP7.35□□□□□ -1.23
LINC01963-201ENST00000562038 FBLN1P23142 703 aa7.35□□□□□ -1.23
LINC01963-201ENST00000562038 PHACTR3Q96KR7 559 aa7.35□□□□□ -1.23
LINC01963-201ENST00000562038 FMNL2Q96PY5 1086 aa7.35□□□□□ -1.23
LINC01963-201ENST00000562038 LTV1Q96GA3 475 aaPredicted RBP7.35□□□□□ -1.23
LINC01963-201ENST00000562038 U2SURPO15042 1029 aaKnown RBP7.34□□□□□ -1.23
LINC01963-201ENST00000562038 CA12O43570 354 aa7.34□□□□□ -1.23
LINC01963-201ENST00000562038 ZNF790Q6PG37 636 aa7.34□□□□□ -1.23
LINC01963-201ENST00000562038 MRS2Q9HD23 443 aa7.34□□□□□ -1.23
LINC01963-201ENST00000562038 ZBED9Q6R2W3 1325 aa7.34□□□□□ -1.23
LINC01963-201ENST00000562038 PPM1GO15355 546 aaPredicted RBP7.34□□□□□ -1.23
LINC01963-201ENST00000562038 USHBP1Q8N6Y0 703 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms