RNA–Protein interactions for RNA: ENST00000561878.1

TMEM170A-202, Transcript of transmembrane protein 170A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM170A, Length 1,072 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-202ENST00000561878 HEG1Q9ULI3 1381 aa31.28■■■□□ 2.6
TMEM170A-202ENST00000561878 USPL1Q5W0Q7 1092 aa31.27■■■□□ 2.6
TMEM170A-202ENST00000561878 RTF1Q92541 710 aaKnown RBP31.27■■■□□ 2.6
TMEM170A-202ENST00000561878 ZNF496Q96IT1 587 aaPredicted RBP31.27■■■□□ 2.6
TMEM170A-202ENST00000561878 NARFQ9UHQ1 456 aa31.27■■■□□ 2.6
TMEM170A-202ENST00000561878 A0A0G2JLW4 131 aa31.25■■■□□ 2.59
TMEM170A-202ENST00000561878 FMNL2Q96PY5 1086 aa31.25■■■□□ 2.59
TMEM170A-202ENST00000561878 BTBD11A6QL63 1104 aa31.24■■■□□ 2.59
TMEM170A-202ENST00000561878 CANXP27824 592 aaKnown RBP31.24■■■□□ 2.59
TMEM170A-202ENST00000561878 DDR1Q08345 913 aa31.24■■■□□ 2.59
TMEM170A-202ENST00000561878 NEFMP07197 916 aa31.23■■■□□ 2.59
TMEM170A-202ENST00000561878 DPEP1P16444 411 aa31.23■■■□□ 2.59
TMEM170A-202ENST00000561878 TM4SF1P30408 202 aa31.23■■■□□ 2.59
TMEM170A-202ENST00000561878 POLRMTO00411 1230 aaKnown RBP31.22■■■□□ 2.59
TMEM170A-202ENST00000561878 BCS1LQ9Y276 419 aa31.22■■■□□ 2.59
TMEM170A-202ENST00000561878 BRCA1P38398 1863 aaKnown RBP31.21■■■□□ 2.59
TMEM170A-202ENST00000561878 A0A087WZG4 1122 aa31.21■■■□□ 2.59
TMEM170A-202ENST00000561878 GIGYF1O75420 1035 aaPredicted RBP31.21■■■□□ 2.59
TMEM170A-202ENST00000561878 ATP10DQ9P241 1426 aa31.21■■■□□ 2.59
TMEM170A-202ENST00000561878 HTATSF1O43719 755 aaKnown RBP31.2■■■□□ 2.59
TMEM170A-202ENST00000561878 EIF5P55010 431 aaKnown RBP31.19■■■□□ 2.58
TMEM170A-202ENST00000561878 ADCY9O60503 1353 aa31.18■■■□□ 2.58
TMEM170A-202ENST00000561878 MCM10Q7L590 875 aa31.17■■■□□ 2.58
TMEM170A-202ENST00000561878 C1QTNF8P60827 252 aa31.16■■■□□ 2.58
TMEM170A-202ENST00000561878 NFIXQ14938 502 aa31.16■■■□□ 2.58
TMEM170A-202ENST00000561878 NPM2Q86SE8 214 aaKnown RBP31.16■■■□□ 2.58
TMEM170A-202ENST00000561878 PIM2Q9P1W9 311 aa31.16■■■□□ 2.58
TMEM170A-202ENST00000561878 AFDNP55196 1824 aaKnown RBP31.15■■■□□ 2.58
TMEM170A-202ENST00000561878 IL6STP40189 918 aaPredicted RBP31.15■■■□□ 2.58
TMEM170A-202ENST00000561878 BCL2L12Q9HB09 334 aa31.15■■■□□ 2.58
TMEM170A-202ENST00000561878 ARFGEF1Q9Y6D6 1849 aa31.14■■■□□ 2.58
TMEM170A-202ENST00000561878 ZNF330Q9Y3S2 320 aaPredicted RBP31.14■■■□□ 2.58
TMEM170A-202ENST00000561878 NRXN2Q9P2S2 1712 aa31.14■■■□□ 2.58
TMEM170A-202ENST00000561878 SCN7AQ01118 1682 aa31.13■■■□□ 2.57
TMEM170A-202ENST00000561878 KCNQ3O43525 872 aa31.13■■■□□ 2.57
TMEM170A-202ENST00000561878 KCNA3P22001 575 aa31.13■■■□□ 2.57
TMEM170A-202ENST00000561878 PNNQ9H307 717 aaKnown RBP31.13■■■□□ 2.57
TMEM170A-202ENST00000561878 GPBP1L1Q9HC44 474 aaPredicted RBP31.12■■■□□ 2.57
TMEM170A-202ENST00000561878 DCTN1Q14203 1278 aa31.11■■■□□ 2.57
TMEM170A-202ENST00000561878 RALBP1Q15311 655 aa31.11■■■□□ 2.57
TMEM170A-202ENST00000561878 ARHGAP27Q6ZUM4 889 aa31.11■■■□□ 2.57
TMEM170A-202ENST00000561878 SERPINB2P05120 415 aa31.1■■■□□ 2.57
TMEM170A-202ENST00000561878 DALRD3Q5D0E6 543 aaKnown RBP31.1■■■□□ 2.57
TMEM170A-202ENST00000561878 DLG5Q8TDM6 1919 aa31.1■■■□□ 2.57
TMEM170A-202ENST00000561878 A1BGP04217 495 aa31.09■■■□□ 2.57
TMEM170A-202ENST00000561878 SNRPA1P09661 255 aaKnown RBP31.09■■■□□ 2.57
TMEM170A-202ENST00000561878 CHRNA5P30532 468 aa31.08■■■□□ 2.57
TMEM170A-202ENST00000561878 MAPK8IP3Q9UPT6 1336 aa31.07■■■□□ 2.56
TMEM170A-202ENST00000561878 TAF7Q15545 349 aaPredicted RBP31.07■■■□□ 2.56
TMEM170A-202ENST00000561878 BICDL1Q6ZP65 573 aa31.07■■■□□ 2.56
TMEM170A-202ENST00000561878 TBC1D2BQ9UPU7 963 aa31.07■■■□□ 2.56
TMEM170A-202ENST00000561878 ZNF526Q8TF50 670 aaPredicted RBP31.06■■■□□ 2.56
TMEM170A-202ENST00000561878 PLEKHF1Q96S99 279 aa31.06■■■□□ 2.56
TMEM170A-202ENST00000561878 USP16Q9Y5T5 823 aa31.06■■■□□ 2.56
TMEM170A-202ENST00000561878 NFE2L2Q16236 605 aa31.04■■■□□ 2.56
TMEM170A-202ENST00000561878 TBC1D9BQ66K14 1250 aa31.04■■■□□ 2.56
TMEM170A-202ENST00000561878 PNISRQ8TF01 805 aaKnown RBP31.04■■■□□ 2.56
TMEM170A-202ENST00000561878 BCORQ6W2J9 1755 aa31.03■■■□□ 2.56
TMEM170A-202ENST00000561878 DDX10Q13206 875 aaKnown RBP31.03■■■□□ 2.56
TMEM170A-202ENST00000561878 DLEC1Q9Y238 1755 aa31.02■■■□□ 2.56
TMEM170A-202ENST00000561878 SENP3-EIF4A1A0A087X0R7 540 aa31.02■■■□□ 2.56
TMEM170A-202ENST00000561878 DZIP3Q86Y13 1208 aaKnown RBP31.02■■■□□ 2.56
TMEM170A-202ENST00000561878 CARMIL3Q8ND23 1372 aa31.02■■■□□ 2.56
TMEM170A-202ENST00000561878 PRAMEF22A3QJZ6 481 aa31.01■■■□□ 2.55
TMEM170A-202ENST00000561878 CAMTA2O94983 1202 aa31■■■□□ 2.55
TMEM170A-202ENST00000561878 LAMB4A4D0S4 1761 aa31■■■□□ 2.55
TMEM170A-202ENST00000561878 KDM3BQ7LBC6 1761 aa31■■■□□ 2.55
TMEM170A-202ENST00000561878 SETDB2Q96T68 719 aa30.98■■■□□ 2.55
TMEM170A-202ENST00000561878 PDZRN3Q9UPQ7 1066 aa30.98■■■□□ 2.55
TMEM170A-202ENST00000561878 H0YIN7 160 aa30.97■■■□□ 2.55
TMEM170A-202ENST00000561878 PIP4K2AP48426 406 aaPredicted RBP30.97■■■□□ 2.55
TMEM170A-202ENST00000561878 C2CD5Q86YS7 1000 aa30.97■■■□□ 2.55
TMEM170A-202ENST00000561878 MIS18AQ9NYP9 233 aa30.97■■■□□ 2.55
TMEM170A-202ENST00000561878 MYBBP1AQ9BQG0 1328 aaKnown RBP30.97■■■□□ 2.55
TMEM170A-202ENST00000561878 ZNF652Q9Y2D9 606 aa30.96■■■□□ 2.55
TMEM170A-202ENST00000561878 NPHP1O15259 732 aa30.95■■■□□ 2.55
TMEM170A-202ENST00000561878 PDE6BP35913 854 aa30.94■■■□□ 2.54
TMEM170A-202ENST00000561878 C9orf131Q5VYM1 1079 aa30.94■■■□□ 2.54
TMEM170A-202ENST00000561878 CLEC4GQ6UXB4 293 aa30.94■■■□□ 2.54
TMEM170A-202ENST00000561878 ANKRD31Q8N7Z5 1873 aa30.94■■■□□ 2.54
TMEM170A-202ENST00000561878 TTLL6Q8N841 843 aa30.94■■■□□ 2.54
TMEM170A-202ENST00000561878 BRIP1Q9BX63 1249 aa30.94■■■□□ 2.54
TMEM170A-202ENST00000561878 PRR5LQ6MZQ0 368 aa30.93■■■□□ 2.54
TMEM170A-202ENST00000561878 CNBD1Q8NA66 436 aa30.93■■■□□ 2.54
TMEM170A-202ENST00000561878 RGL2O15211 777 aa30.91■■■□□ 2.54
TMEM170A-202ENST00000561878 ST5P78524 1137 aa30.91■■■□□ 2.54
TMEM170A-202ENST00000561878 THUMPD2Q9BTF0 503 aaKnown RBP30.91■■■□□ 2.54
TMEM170A-202ENST00000561878 NBPF26B4DH59 902 aa30.9■■■□□ 2.54
TMEM170A-202ENST00000561878 NBPF10Q6P3W6 841 aaKnown RBP30.9■■■□□ 2.54
TMEM170A-202ENST00000561878 NBPF15Q8N660 670 aa30.9■■■□□ 2.54
TMEM170A-202ENST00000561878 RNF181Q9P0P0 153 aa30.9■■■□□ 2.54
TMEM170A-202ENST00000561878 EIF4A1P60842 406 aaKnown RBP30.89■■■□□ 2.54
TMEM170A-202ENST00000561878 SBF1O95248 1867 aa30.89■■■□□ 2.53
TMEM170A-202ENST00000561878 RIPK4P57078 832 aa30.88■■■□□ 2.53
TMEM170A-202ENST00000561878 LMOD3Q0VAK6 560 aa30.88■■■□□ 2.53
TMEM170A-202ENST00000561878 KIF3CO14782 793 aa30.87■■■□□ 2.53
TMEM170A-202ENST00000561878 ZNF622Q969S3 477 aaKnown RBP eCLIP30.87■■■□□ 2.53
TMEM170A-202ENST00000561878 COL11A2P13942 1736 aaPredicted RBP30.87■■■□□ 2.53
TMEM170A-202ENST00000561878 NBPF5PQ86XG9 351 aaPredicted RBP30.86■■■□□ 2.53
TMEM170A-202ENST00000561878 CCDC24Q8N4L8 307 aa30.86■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms