RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 CDK19Q9BWU1 502 aa7.86□□□□□ -1.15
HERC1-213ENST00000561359 VPS9D1Q9Y2B5 631 aa7.86□□□□□ -1.15
HERC1-213ENST00000561359 ARIH1Q9Y4X5 557 aaPredicted RBP7.86□□□□□ -1.15
HERC1-213ENST00000561359 IGSF1Q8N6C5 1336 aa7.85□□□□□ -1.15
HERC1-213ENST00000561359 AKAP12Q02952 1782 aa7.85□□□□□ -1.15
HERC1-213ENST00000561359 PLEKHG3A1L390 1219 aa7.85□□□□□ -1.15
HERC1-213ENST00000561359 MAP3K7O43318 606 aa7.85□□□□□ -1.15
HERC1-213ENST00000561359 FSTL1Q12841 308 aa7.85□□□□□ -1.15
HERC1-213ENST00000561359 COL23A1Q86Y22 540 aaPredicted RBP7.85□□□□□ -1.15
HERC1-213ENST00000561359 TNS2Q63HR2 1409 aa7.85□□□□□ -1.15
HERC1-213ENST00000561359 KAT6BQ8WYB5 2073 aa7.85□□□□□ -1.15
HERC1-213ENST00000561359 WDR90Q96KV7 1748 aa7.84□□□□□ -1.15
HERC1-213ENST00000561359 PPP1R3GB7ZBB8 358 aa7.84□□□□□ -1.15
HERC1-213ENST00000561359 ZBED2Q9BTP6 218 aa7.84□□□□□ -1.15
HERC1-213ENST00000561359 CCDC7Q96M83 1385 aa7.84□□□□□ -1.16
HERC1-213ENST00000561359 NHSQ6T4R5 1651 aa7.83□□□□□ -1.16
HERC1-213ENST00000561359 GOLGA8CPA6NN73 597 aa7.83□□□□□ -1.16
HERC1-213ENST00000561359 HRO43593 1189 aa7.83□□□□□ -1.16
HERC1-213ENST00000561359 FAM161AQ3B820 660 aa7.83□□□□□ -1.16
HERC1-213ENST00000561359 C6orf132Q5T0Z8 1188 aa7.83□□□□□ -1.16
HERC1-213ENST00000561359 KCNV2Q8TDN2 545 aa7.83□□□□□ -1.16
HERC1-213ENST00000561359 ARHGEF1Q92888 912 aaKnown RBP7.83□□□□□ -1.16
HERC1-213ENST00000561359 SYTL4Q96C24 671 aaPredicted RBP7.83□□□□□ -1.16
HERC1-213ENST00000561359 SLC4A5Q9BY07 1137 aa7.83□□□□□ -1.16
HERC1-213ENST00000561359 COL9A1P20849 921 aa7.82□□□□□ -1.16
HERC1-213ENST00000561359 PPIP5K1Q6PFW1 1433 aa7.82□□□□□ -1.16
HERC1-213ENST00000561359 ARHGEF25Q86VW2 580 aa7.82□□□□□ -1.16
HERC1-213ENST00000561359 NLRP2Q9NX02 1062 aa7.82□□□□□ -1.16
HERC1-213ENST00000561359 CCNL1Q9UK58 526 aaPredicted RBP7.82□□□□□ -1.16
HERC1-213ENST00000561359 ITSN1Q15811 1721 aa7.81□□□□□ -1.16
HERC1-213ENST00000561359 COL24A1Q17RW2 1714 aa7.81□□□□□ -1.16
HERC1-213ENST00000561359 CPSF1Q10570 1443 aaKnown RBP7.81□□□□□ -1.16
HERC1-213ENST00000561359 IL2RBP14784 551 aa7.81□□□□□ -1.16
HERC1-213ENST00000561359 PPARGC1BQ86YN6 1023 aaKnown RBP7.81□□□□□ -1.16
HERC1-213ENST00000561359 MRPL50Q8N5N7 158 aaKnown RBP7.81□□□□□ -1.16
HERC1-213ENST00000561359 DDX54Q8TDD1 881 aaKnown RBP7.81□□□□□ -1.16
HERC1-213ENST00000561359 NBPF3Q9H094 633 aa7.81□□□□□ -1.16
HERC1-213ENST00000561359 ARHGEF28Q8N1W1 1705 aaKnown RBP7.81□□□□□ -1.16
HERC1-213ENST00000561359 ADGRB1O14514 1584 aa7.8□□□□□ -1.16
HERC1-213ENST00000561359 BTAF1O14981 1849 aa7.8□□□□□ -1.16
HERC1-213ENST00000561359 SRPK2P78362 688 aaKnown RBP7.8□□□□□ -1.16
HERC1-213ENST00000561359 PROX2Q3B8N5 592 aa7.8□□□□□ -1.16
HERC1-213ENST00000561359 ARHGAP27Q6ZUM4 889 aa7.8□□□□□ -1.16
HERC1-213ENST00000561359 KCNH5Q8NCM2 988 aa7.8□□□□□ -1.16
HERC1-213ENST00000561359 KCTD12Q96CX2 325 aaKnown RBP7.8□□□□□ -1.16
HERC1-213ENST00000561359 MPHOSPH9Q99550 1183 aa7.8□□□□□ -1.16
HERC1-213ENST00000561359 KDM2AQ9Y2K7 1162 aa7.8□□□□□ -1.16
HERC1-213ENST00000561359 QSER1Q2KHR3 1735 aa7.79□□□□□ -1.16
HERC1-213ENST00000561359 PRIM1P49642 420 aaKnown RBP7.79□□□□□ -1.16
HERC1-213ENST00000561359 TSR1Q2NL82 804 aaKnown RBP7.79□□□□□ -1.16
HERC1-213ENST00000561359 SMC1BQ8NDV3 1235 aa7.79□□□□□ -1.16
HERC1-213ENST00000561359 FLAD1Q8NFF5 587 aa7.79□□□□□ -1.16
HERC1-213ENST00000561359 WNK3Q9BYP7 1800 aa7.79□□□□□ -1.16
HERC1-213ENST00000561359 ABCC6O95255 1503 aa7.78□□□□□ -1.16
HERC1-213ENST00000561359 RRAGCQ9HB90 399 aa7.78□□□□□ -1.16
HERC1-213ENST00000561359 BCS1LQ9Y276 419 aa7.78□□□□□ -1.16
HERC1-213ENST00000561359 SLIT3O75094 1523 aa7.78□□□□□ -1.16
HERC1-213ENST00000561359 KDM2BQ8NHM5 1336 aa7.78□□□□□ -1.16
HERC1-213ENST00000561359 C9orf131Q5VYM1 1079 aa7.77□□□□□ -1.17
HERC1-213ENST00000561359 HCSTQ9UBK5 93 aa7.77□□□□□ -1.17
HERC1-213ENST00000561359 RABGEF1Q9UJ41 708 aa7.77□□□□□ -1.17
HERC1-213ENST00000561359 TUBGCP6Q96RT7 1819 aa7.77□□□□□ -1.17
HERC1-213ENST00000561359 TRPM1Q7Z4N2 1603 aa7.77□□□□□ -1.17
HERC1-213ENST00000561359 COL18A1P39060 1754 aa7.76□□□□□ -1.17
HERC1-213ENST00000561359 BHMG1C9JSJ3 638 aaPredicted RBP7.76□□□□□ -1.17
HERC1-213ENST00000561359 MLLT1Q03111 559 aaPredicted RBP7.76□□□□□ -1.17
HERC1-213ENST00000561359 CABP1Q9NZU7 370 aa7.76□□□□□ -1.17
HERC1-213ENST00000561359 KIAA1468Q9P260 1216 aa7.76□□□□□ -1.17
HERC1-213ENST00000561359 USP47Q96K76 1375 aa7.75□□□□□ -1.17
HERC1-213ENST00000561359 PLEKHG2Q9H7P9 1386 aa7.75□□□□□ -1.17
HERC1-213ENST00000561359 TRIM6-TRIM34B2RNG4 842 aa7.75□□□□□ -1.17
HERC1-213ENST00000561359 FOXN1O15353 648 aa7.75□□□□□ -1.17
HERC1-213ENST00000561359 OSBPP22059 807 aa7.75□□□□□ -1.17
HERC1-213ENST00000561359 HMGB2P26583 209 aaKnown RBP7.75□□□□□ -1.17
HERC1-213ENST00000561359 DCAF11Q8TEB1 546 aa7.75□□□□□ -1.17
HERC1-213ENST00000561359 WNT2BQ93097 391 aa7.75□□□□□ -1.17
HERC1-213ENST00000561359 PRDM10Q9NQV6 1147 aa7.75□□□□□ -1.17
HERC1-213ENST00000561359 ANKRD36BQ8N2N9 1353 aa7.74□□□□□ -1.17
HERC1-213ENST00000561359 KCPQ6ZWJ8 1503 aa7.74□□□□□ -1.17
HERC1-213ENST00000561359 A0A0G2JLW4 131 aa7.74□□□□□ -1.17
HERC1-213ENST00000561359 FCHSD2O94868 740 aa7.74□□□□□ -1.17
HERC1-213ENST00000561359 MLLT3P42568 568 aaPredicted RBP7.74□□□□□ -1.17
HERC1-213ENST00000561359 PTPN5P54829 565 aa7.74□□□□□ -1.17
HERC1-213ENST00000561359 SMIM5Q71RC9 77 aa7.74□□□□□ -1.17
HERC1-213ENST00000561359 ABHD8Q96I13 439 aa7.74□□□□□ -1.17
HERC1-213ENST00000561359 AK7Q96M32 723 aa7.74□□□□□ -1.17
HERC1-213ENST00000561359 CICQ96RK0 1608 aaPredicted RBP7.74□□□□□ -1.17
HERC1-213ENST00000561359 CTCFP49711 727 aaPredicted RBP7.73□□□□□ -1.17
HERC1-213ENST00000561359 PACS2Q86VP3 889 aa7.73□□□□□ -1.17
HERC1-213ENST00000561359 ANKRD24Q8TF21 1146 aa7.73□□□□□ -1.17
HERC1-213ENST00000561359 AIDAQ96BJ3 306 aa7.73□□□□□ -1.17
HERC1-213ENST00000561359 RNF181Q9P0P0 153 aa7.73□□□□□ -1.17
HERC1-213ENST00000561359 MKRN1Q9UHC7 482 aaKnown RBP7.73□□□□□ -1.17
HERC1-213ENST00000561359 TTC21BQ7Z4L5 1316 aa7.73□□□□□ -1.17
HERC1-213ENST00000561359 NSD2O96028 1365 aa7.72□□□□□ -1.17
HERC1-213ENST00000561359 RGPD5Q99666 1765 aa7.72□□□□□ -1.17
HERC1-213ENST00000561359 C10orf71Q711Q0 1435 aa7.72□□□□□ -1.17
HERC1-213ENST00000561359 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.72□□□□□ -1.17
HERC1-213ENST00000561359 TGFB2P61812 414 aa7.72□□□□□ -1.17
HERC1-213ENST00000561359 CDHR5Q9HBB8 845 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 181.9 ms