RNA–Protein interactions for RNA: ENST00000561119.5

CRTC3-211, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 5

Gene CRTC3, Length 630 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-211ENST00000561119 TMOD3Q9NYL9 352 aa13.56□□□□□ -0.24
CRTC3-211ENST00000561119 A0A0C4DFX4 3053 aa13.55□□□□□ -0.24
CRTC3-211ENST00000561119 TRAF5O00463 557 aa13.55□□□□□ -0.24
CRTC3-211ENST00000561119 CA12O43570 354 aa13.55□□□□□ -0.24
CRTC3-211ENST00000561119 HACL1Q9UJ83 578 aa13.55□□□□□ -0.24
CRTC3-211ENST00000561119 EVC2Q86UK5 1308 aa13.55□□□□□ -0.24
CRTC3-211ENST00000561119 CST9Q5W186 159 aa13.54□□□□□ -0.24
CRTC3-211ENST00000561119 ZNF622Q969S3 477 aaKnown RBP eCLIP13.54□□□□□ -0.247e-6■□□□□ 9.9
CRTC3-211ENST00000561119 MAP3K19Q56UN5 1328 aa13.54□□□□□ -0.24
CRTC3-211ENST00000561119 SCN4AP35499 1836 aa13.53□□□□□ -0.24
CRTC3-211ENST00000561119 L3MBTL3Q96JM7 780 aaPredicted RBP13.53□□□□□ -0.24
CRTC3-211ENST00000561119 ZIC5Q96T25 663 aa13.53□□□□□ -0.24
CRTC3-211ENST00000561119 RNF123Q5XPI4 1314 aa13.53□□□□□ -0.24
CRTC3-211ENST00000561119 ZNF541Q9H0D2 1346 aa13.53□□□□□ -0.24
CRTC3-211ENST00000561119 CD163L1Q9NR16 1453 aa13.53□□□□□ -0.24
CRTC3-211ENST00000561119 TM4SF1P30408 202 aa13.52□□□□□ -0.25
CRTC3-211ENST00000561119 TAOK3Q9H2K8 898 aa13.52□□□□□ -0.25
CRTC3-211ENST00000561119 TLL2Q9Y6L7 1015 aa13.52□□□□□ -0.25
CRTC3-211ENST00000561119 CGNL1Q0VF96 1302 aa13.52□□□□□ -0.25
CRTC3-211ENST00000561119 ADAMTSL1Q8N6G6 1762 aa13.51□□□□□ -0.25
CRTC3-211ENST00000561119 USP42Q9H9J4 1324 aaKnown RBP13.51□□□□□ -0.25
CRTC3-211ENST00000561119 H0YIN7 160 aa13.51□□□□□ -0.25
CRTC3-211ENST00000561119 RC3H1Q5TC82 1133 aaKnown RBP13.51□□□□□ -0.25
CRTC3-211ENST00000561119 MYH14Q7Z406 1995 aaKnown RBP13.51□□□□□ -0.25
CRTC3-211ENST00000561119 MON2Q7Z3U7 1717 aa13.5□□□□□ -0.25
CRTC3-211ENST00000561119 SBNO2Q9Y2G9 1366 aa13.5□□□□□ -0.25
CRTC3-211ENST00000561119 BRPF1P55201 1214 aaPredicted RBP13.5□□□□□ -0.25
CRTC3-211ENST00000561119 HPS5Q9UPZ3 1129 aa13.5□□□□□ -0.25
CRTC3-211ENST00000561119 SZT2Q5T011 3432 aa13.49□□□□□ -0.25
CRTC3-211ENST00000561119 FER1L6Q2WGJ9 1857 aa13.49□□□□□ -0.25
CRTC3-211ENST00000561119 USPL1Q5W0Q7 1092 aa13.49□□□□□ -0.25
CRTC3-211ENST00000561119 AFDNP55196 1824 aaKnown RBP13.48□□□□□ -0.25
CRTC3-211ENST00000561119 DLEC1Q9Y238 1755 aa13.48□□□□□ -0.25
CRTC3-211ENST00000561119 CARMIL3Q8ND23 1372 aa13.48□□□□□ -0.25
CRTC3-211ENST00000561119 CNTNAP4Q9C0A0 1308 aa13.48□□□□□ -0.25
CRTC3-211ENST00000561119 BICDL1Q6ZP65 573 aa13.48□□□□□ -0.25
CRTC3-211ENST00000561119 PNMA8AQ86V59 439 aaPredicted RBP13.48□□□□□ -0.25
CRTC3-211ENST00000561119 CCDC24Q8N4L8 307 aa13.48□□□□□ -0.25
CRTC3-211ENST00000561119 TMC1Q8TDI8 760 aa13.48□□□□□ -0.25
CRTC3-211ENST00000561119 CUL9Q8IWT3 2517 aa13.48□□□□□ -0.25
CRTC3-211ENST00000561119 NFIXQ14938 502 aa13.47□□□□□ -0.25
CRTC3-211ENST00000561119 RRS1Q15050 365 aaKnown RBP13.47□□□□□ -0.25
CRTC3-211ENST00000561119 STAC3Q96MF2 364 aa13.47□□□□□ -0.25
CRTC3-211ENST00000561119 MKI67P46013 3256 aaKnown RBP13.47□□□□□ -0.25
CRTC3-211ENST00000561119 KDRP35968 1356 aa13.46□□□□□ -0.25
CRTC3-211ENST00000561119 SERPINB2P05120 415 aa13.46□□□□□ -0.25
CRTC3-211ENST00000561119 CRKLP46109 303 aaKnown RBP13.46□□□□□ -0.25
CRTC3-211ENST00000561119 COLQQ9Y215 455 aaPredicted RBP13.46□□□□□ -0.25
CRTC3-211ENST00000561119 ADAMTS7Q9UKP4 1686 aa13.46□□□□□ -0.26
CRTC3-211ENST00000561119 ZPR1O75312 459 aa13.45□□□□□ -0.26
CRTC3-211ENST00000561119 NKX1-1Q15270 411 aaPredicted RBP13.45□□□□□ -0.26
CRTC3-211ENST00000561119 SAPCD2Q86UD0 394 aa13.45□□□□□ -0.26
CRTC3-211ENST00000561119 ZNF408Q9H9D4 720 aa13.45□□□□□ -0.26
CRTC3-211ENST00000561119 TRPM7Q96QT4 1865 aa13.44□□□□□ -0.26
CRTC3-211ENST00000561119 TRPA1O75762 1119 aa13.44□□□□□ -0.26
CRTC3-211ENST00000561119 CELF2O95319 508 aaKnown RBP13.44□□□□□ -0.26
CRTC3-211ENST00000561119 CTU1Q7Z7A3 348 aaKnown RBP13.44□□□□□ -0.26
CRTC3-211ENST00000561119 SYNE4Q8N205 404 aa13.44□□□□□ -0.26
CRTC3-211ENST00000561119 ZNF277Q9NRM2 450 aaPredicted RBP13.44□□□□□ -0.26
CRTC3-211ENST00000561119 COL5A3P25940 1745 aaPredicted RBP13.44□□□□□ -0.26
CRTC3-211ENST00000561119 PITPNM2Q9BZ72 1349 aa13.43□□□□□ -0.26
CRTC3-211ENST00000561119 PTCD1O75127 700 aaKnown RBP13.43□□□□□ -0.26
CRTC3-211ENST00000561119 LTBP3Q9NS15 1303 aa13.42□□□□□ -0.26
CRTC3-211ENST00000561119 SMG6Q86US8 1419 aaKnown RBP13.42□□□□□ -0.26
CRTC3-211ENST00000561119 HDGFL2Q7Z4V5 671 aaPredicted RBP13.42□□□□□ -0.26
CRTC3-211ENST00000561119 SLC12A5Q9H2X9 1139 aa13.42□□□□□ -0.26
CRTC3-211ENST00000561119 GJA3Q9Y6H8 435 aa13.42□□□□□ -0.26
CRTC3-211ENST00000561119 HSP90AB2PQ58FF8 381 aa13.41□□□□□ -0.26
CRTC3-211ENST00000561119 CACNA1SQ13698 1873 aa13.41□□□□□ -0.26
CRTC3-211ENST00000561119 COL6A3P12111 3177 aa13.4□□□□□ -0.26
CRTC3-211ENST00000561119 EPS15P42566 896 aa13.4□□□□□ -0.26
CRTC3-211ENST00000561119 COG3Q96JB2 828 aa13.4□□□□□ -0.26
CRTC3-211ENST00000561119 SPG7Q9UQ90 795 aa13.4□□□□□ -0.26
CRTC3-211ENST00000561119 TRIOBPQ9H2D6 2365 aa13.39□□□□□ -0.27
CRTC3-211ENST00000561119 SLX4Q8IY92 1834 aa13.39□□□□□ -0.27
CRTC3-211ENST00000561119 RNF186Q9NXI6 227 aa13.39□□□□□ -0.27
CRTC3-211ENST00000561119 PRPF40BQ6NWY9 871 aaKnown RBP13.38□□□□□ -0.27
CRTC3-211ENST00000561119 INTS5Q6P9B9 1019 aaKnown RBP13.38□□□□□ -0.27
CRTC3-211ENST00000561119 OLFM4Q6UX06 510 aa13.38□□□□□ -0.27
CRTC3-211ENST00000561119 EDC4Q6P2E9 1401 aaKnown RBP13.38□□□□□ -0.27
CRTC3-211ENST00000561119 NRXN2Q9P2S2 1712 aa13.37□□□□□ -0.27
CRTC3-211ENST00000561119 PHKG2P15735 406 aa13.37□□□□□ -0.27
CRTC3-211ENST00000561119 NOGQ13253 232 aa13.37□□□□□ -0.27
CRTC3-211ENST00000561119 AKAP4Q5JQC9 854 aa13.37□□□□□ -0.27
CRTC3-211ENST00000561119 COL11A2P13942 1736 aaPredicted RBP13.36□□□□□ -0.27
CRTC3-211ENST00000561119 ANKRD31Q8N7Z5 1873 aa13.36□□□□□ -0.27
CRTC3-211ENST00000561119 LMOD1P29536 600 aaPredicted RBP13.36□□□□□ -0.27
CRTC3-211ENST00000561119 GLIS2Q9BZE0 524 aaPredicted RBP13.36□□□□□ -0.27
CRTC3-211ENST00000561119 BCL2L12Q9HB09 334 aa13.36□□□□□ -0.27
CRTC3-211ENST00000561119 POTEFA5A3E0 1075 aa13.35□□□□□ -0.27
CRTC3-211ENST00000561119 KIF23Q02241 960 aaPredicted RBP13.35□□□□□ -0.27
CRTC3-211ENST00000561119 IFNL2Q8IZJ0 200 aa13.35□□□□□ -0.27
CRTC3-211ENST00000561119 GPC2Q8N158 579 aa13.35□□□□□ -0.27
CRTC3-211ENST00000561119 SCN11AQ9UI33 1791 aa13.35□□□□□ -0.27
CRTC3-211ENST00000561119 A0A1W2PP64 1363 aa13.34□□□□□ -0.27
CRTC3-211ENST00000561119 DLK2Q6UY11 383 aa13.34□□□□□ -0.27
CRTC3-211ENST00000561119 HDAC9Q9UKV0 1011 aa13.34□□□□□ -0.27
CRTC3-211ENST00000561119 FZD9O00144 591 aa13.33□□□□□ -0.28
CRTC3-211ENST00000561119 PDE6BP35913 854 aa13.33□□□□□ -0.28
CRTC3-211ENST00000561119 HUNKP57058 714 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms