RNA–Protein interactions for RNA: ENST00000561078.5

SPG21-213, Transcript of SPG21, maspardin, humanhuman

TSL 5

Gene SPG21, Length 1,520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-213ENST00000561078 NEUROD2Q15784 382 aa19.44■□□□□ 0.7
SPG21-213ENST00000561078 STARD3NLO95772 234 aa19.43■□□□□ 0.7
SPG21-213ENST00000561078 KLHL34Q8N239 644 aa19.43■□□□□ 0.7
SPG21-213ENST00000561078 RRP7AQ9Y3A4 280 aaKnown RBP19.43■□□□□ 0.7
SPG21-213ENST00000561078 ZNF521Q96K83 1311 aa19.43■□□□□ 0.7
SPG21-213ENST00000561078 TJP1Q07157 1748 aa19.43■□□□□ 0.7
SPG21-213ENST00000561078 BTBD11A6QL63 1104 aa19.42■□□□□ 0.7
SPG21-213ENST00000561078 GYS1P13807 737 aa19.42■□□□□ 0.7
SPG21-213ENST00000561078 ZNF496Q96IT1 587 aaPredicted RBP19.42■□□□□ 0.7
SPG21-213ENST00000561078 VIRMAQ69YN4 1812 aaKnown RBP19.42■□□□□ 0.7
SPG21-213ENST00000561078 NCBP3Q53F19 620 aaKnown RBP19.41■□□□□ 0.7
SPG21-213ENST00000561078 CDCA7LQ96GN5 454 aa19.41■□□□□ 0.7
SPG21-213ENST00000561078 FMNL2Q96PY5 1086 aa19.41■□□□□ 0.7
SPG21-213ENST00000561078 SUPT16HQ9Y5B9 1047 aaKnown RBP19.41■□□□□ 0.7
SPG21-213ENST00000561078 HEG1Q9ULI3 1381 aa19.41■□□□□ 0.7
SPG21-213ENST00000561078 NLGN2Q8NFZ4 835 aa19.41■□□□□ 0.7
SPG21-213ENST00000561078 MYH14Q7Z406 1995 aaKnown RBP19.4■□□□□ 0.7
SPG21-213ENST00000561078 UBR2Q8IWV8 1755 aa19.4■□□□□ 0.7
SPG21-213ENST00000561078 SOS1Q07889 1333 aaPredicted RBP19.4■□□□□ 0.7
SPG21-213ENST00000561078 USP42Q9H9J4 1324 aaKnown RBP19.4■□□□□ 0.7
SPG21-213ENST00000561078 MMP10P09238 476 aa19.4■□□□□ 0.7
SPG21-213ENST00000561078 CCDC27Q2M243 656 aa19.4■□□□□ 0.7
SPG21-213ENST00000561078 MCM10Q7L590 875 aa19.4■□□□□ 0.7
SPG21-213ENST00000561078 SIPA1L3O60292 1781 aaPredicted RBP19.39■□□□□ 0.69
SPG21-213ENST00000561078 TAF7Q15545 349 aaPredicted RBP19.39■□□□□ 0.69
SPG21-213ENST00000561078 NFE2L2Q16236 605 aa19.39■□□□□ 0.69
SPG21-213ENST00000561078 GPR162Q16538 588 aa19.39■□□□□ 0.69
SPG21-213ENST00000561078 WWC1Q8IX03 1113 aa19.39■□□□□ 0.69
SPG21-213ENST00000561078 TMPOP42166 694 aaKnown RBP19.38■□□□□ 0.69
SPG21-213ENST00000561078 E9PSI1 815 aa19.37■□□□□ 0.69
SPG21-213ENST00000561078 ZPR1O75312 459 aa19.37■□□□□ 0.69
SPG21-213ENST00000561078 YY1P25490 414 aa19.37■□□□□ 0.69
SPG21-213ENST00000561078 ZBTB1Q9Y2K1 713 aa19.37■□□□□ 0.69
SPG21-213ENST00000561078 DLG5Q8TDM6 1919 aa19.36■□□□□ 0.69
SPG21-213ENST00000561078 PARP3Q9Y6F1 533 aa19.36■□□□□ 0.69
SPG21-213ENST00000561078 A0A087WZG4 1122 aa19.35■□□□□ 0.69
SPG21-213ENST00000561078 GRIN3BO60391 1043 aa19.35■□□□□ 0.69
SPG21-213ENST00000561078 RIPK4P57078 832 aa19.35■□□□□ 0.69
SPG21-213ENST00000561078 SLFN5Q08AF3 891 aa19.35■□□□□ 0.69
SPG21-213ENST00000561078 DCTN1Q14203 1278 aa19.35■□□□□ 0.69
SPG21-213ENST00000561078 WDR63Q8IWG1 891 aa19.35■□□□□ 0.69
SPG21-213ENST00000561078 NARFQ9UHQ1 456 aa19.35■□□□□ 0.69
SPG21-213ENST00000561078 EIF5P55010 431 aaKnown RBP19.35■□□□□ 0.69
SPG21-213ENST00000561078 TGFB2P61812 414 aa19.35■□□□□ 0.69
SPG21-213ENST00000561078 SRP68Q9UHB9 627 aaKnown RBP19.35■□□□□ 0.69
SPG21-213ENST00000561078 COL15A1P39059 1388 aa19.34■□□□□ 0.69
SPG21-213ENST00000561078 KCNQ3O43525 872 aa19.34■□□□□ 0.69
SPG21-213ENST00000561078 SNRPA1P09661 255 aaKnown RBP19.34■□□□□ 0.69
SPG21-213ENST00000561078 C4AP0C0L4 1744 aa19.33■□□□□ 0.68
SPG21-213ENST00000561078 CANXP27824 592 aaKnown RBP19.33■□□□□ 0.68
SPG21-213ENST00000561078 TM4SF1P30408 202 aa19.33■□□□□ 0.68
SPG21-213ENST00000561078 IL6STP40189 918 aaPredicted RBP19.33■□□□□ 0.68
SPG21-213ENST00000561078 FKBP8Q14318 412 aa19.33■□□□□ 0.68
SPG21-213ENST00000561078 DUSP27Q5VZP5 1158 aa19.32■□□□□ 0.68
SPG21-213ENST00000561078 USPL1Q5W0Q7 1092 aa19.32■□□□□ 0.68
SPG21-213ENST00000561078 RCAN3Q9UKA8 241 aa19.32■□□□□ 0.68
SPG21-213ENST00000561078 LMOD3Q0VAK6 560 aa19.31■□□□□ 0.68
SPG21-213ENST00000561078 NPM2Q86SE8 214 aaKnown RBP19.3■□□□□ 0.68
SPG21-213ENST00000561078 PELP1Q8IZL8 1130 aaKnown RBP19.3■□□□□ 0.68
SPG21-213ENST00000561078 USP16Q9Y5T5 823 aa19.3■□□□□ 0.68
SPG21-213ENST00000561078 YBX3P16989 372 aaKnown RBP eCLIP19.3■□□□□ 0.685e-6■■■□□ 15.9
SPG21-213ENST00000561078 MYH16Q9H6N6 1097 aa19.3■□□□□ 0.68
SPG21-213ENST00000561078 BABAM1Q9NWV8 329 aa19.3■□□□□ 0.68
SPG21-213ENST00000561078 C10orf71Q711Q0 1435 aa19.29■□□□□ 0.68
SPG21-213ENST00000561078 A1BGP04217 495 aa19.29■□□□□ 0.68
SPG21-213ENST00000561078 TRMT2AQ8IZ69 625 aaKnown RBP19.29■□□□□ 0.68
SPG21-213ENST00000561078 TRIM35Q9UPQ4 493 aa19.29■□□□□ 0.68
SPG21-213ENST00000561078 POLRMTO00411 1230 aaKnown RBP19.28■□□□□ 0.68
SPG21-213ENST00000561078 CALD1Q05682 793 aaKnown RBP19.28■□□□□ 0.68
SPG21-213ENST00000561078 BCL2L12Q9HB09 334 aa19.28■□□□□ 0.68
SPG21-213ENST00000561078 SPINK5Q9NQ38 1064 aaPredicted RBP19.28■□□□□ 0.68
SPG21-213ENST00000561078 DDR1Q08345 913 aa19.27■□□□□ 0.68
SPG21-213ENST00000561078 KIF13BQ9NQT8 1826 aa19.26■□□□□ 0.67
SPG21-213ENST00000561078 NFIXQ14938 502 aa19.26■□□□□ 0.67
SPG21-213ENST00000561078 MIS18AQ9NYP9 233 aa19.26■□□□□ 0.67
SPG21-213ENST00000561078 IL16Q14005 1332 aa19.26■□□□□ 0.67
SPG21-213ENST00000561078 RGL2O15211 777 aa19.25■□□□□ 0.67
SPG21-213ENST00000561078 GIGYF1O75420 1035 aaPredicted RBP19.25■□□□□ 0.67
SPG21-213ENST00000561078 EIF4A1P60842 406 aaKnown RBP19.25■□□□□ 0.67
SPG21-213ENST00000561078 PXDNLA1KZ92 1463 aa19.25■□□□□ 0.67
SPG21-213ENST00000561078 PRAMEF22A3QJZ6 481 aa19.24■□□□□ 0.67
SPG21-213ENST00000561078 THUMPD2Q9BTF0 503 aaKnown RBP19.24■□□□□ 0.67
SPG21-213ENST00000561078 CLEC4GQ6UXB4 293 aa19.23■□□□□ 0.67
SPG21-213ENST00000561078 TBC1D2BQ9UPU7 963 aa19.23■□□□□ 0.67
SPG21-213ENST00000561078 A0A0G2JLW4 131 aa19.22■□□□□ 0.67
SPG21-213ENST00000561078 SERPINB2P05120 415 aa19.22■□□□□ 0.67
SPG21-213ENST00000561078 IRX6P78412 446 aaPredicted RBP19.22■□□□□ 0.67
SPG21-213ENST00000561078 DZIP3Q86Y13 1208 aaKnown RBP19.22■□□□□ 0.67
SPG21-213ENST00000561078 ZNF330Q9Y3S2 320 aaPredicted RBP19.22■□□□□ 0.67
SPG21-213ENST00000561078 RNF123Q5XPI4 1314 aa19.22■□□□□ 0.67
SPG21-213ENST00000561078 CHD4Q14839 1912 aa19.22■□□□□ 0.67
SPG21-213ENST00000561078 CAMTA2O94983 1202 aa19.21■□□□□ 0.67
SPG21-213ENST00000561078 DPEP1P16444 411 aa19.21■□□□□ 0.67
SPG21-213ENST00000561078 TSPYL4Q9UJ04 414 aa19.21■□□□□ 0.67
SPG21-213ENST00000561078 KCNA3P22001 575 aa19.2■□□□□ 0.66
SPG21-213ENST00000561078 RRP1P56182 461 aaKnown RBP19.2■□□□□ 0.66
SPG21-213ENST00000561078 KDM3BQ7LBC6 1761 aa19.2■□□□□ 0.66
SPG21-213ENST00000561078 NBPF26B4DH59 902 aa19.2■□□□□ 0.66
SPG21-213ENST00000561078 TBC1D9BQ66K14 1250 aa19.2■□□□□ 0.66
SPG21-213ENST00000561078 NBPF10Q6P3W6 841 aaKnown RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms