RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 DDR1Q08345 913 aa14.51□□□□□ -0.09
TPM1-227ENST00000560970 SLC52A2Q9HAB3 445 aa14.51□□□□□ -0.09
TPM1-227ENST00000560970 FKBP8Q14318 412 aa14.5□□□□□ -0.09
TPM1-227ENST00000560970 CNGB1Q14028 1251 aaPredicted RBP14.49□□□□□ -0.09
TPM1-227ENST00000560970 INTS5Q6P9B9 1019 aaKnown RBP14.49□□□□□ -0.09
TPM1-227ENST00000560970 ARHGAP27Q6ZUM4 889 aa14.49□□□□□ -0.09
TPM1-227ENST00000560970 POLRMTO00411 1230 aaKnown RBP14.48□□□□□ -0.09
TPM1-227ENST00000560970 KCNA3P22001 575 aa14.48□□□□□ -0.09
TPM1-227ENST00000560970 DNAJC10Q8IXB1 793 aa14.48□□□□□ -0.09
TPM1-227ENST00000560970 PIM2Q9P1W9 311 aa14.48□□□□□ -0.09
TPM1-227ENST00000560970 DLG5Q8TDM6 1919 aa14.47□□□□□ -0.09
TPM1-227ENST00000560970 HMOX1P09601 288 aa14.47□□□□□ -0.09
TPM1-227ENST00000560970 DALRD3Q5D0E6 543 aaKnown RBP14.47□□□□□ -0.09
TPM1-227ENST00000560970 RNMTO43148 476 aaKnown RBP14.46□□□□□ -0.09
TPM1-227ENST00000560970 ZPR1O75312 459 aa14.46□□□□□ -0.09
TPM1-227ENST00000560970 TOMM70O94826 608 aa14.46□□□□□ -0.09
TPM1-227ENST00000560970 APLP1P51693 650 aa14.46□□□□□ -0.09
TPM1-227ENST00000560970 USPL1Q5W0Q7 1092 aa14.46□□□□□ -0.09
TPM1-227ENST00000560970 NMRK2Q9NPI5 230 aa14.46□□□□□ -0.09
TPM1-227ENST00000560970 DIAPH1O60610 1272 aaKnown RBP14.45□□□□□ -0.1
TPM1-227ENST00000560970 CYP19A1P11511 503 aaPredicted RBP14.45□□□□□ -0.1
TPM1-227ENST00000560970 IFFO2Q5TF58 517 aa14.45□□□□□ -0.1
TPM1-227ENST00000560970 C9orf131Q5VYM1 1079 aa14.45□□□□□ -0.1
TPM1-227ENST00000560970 LGR6Q9HBX8 967 aa14.45□□□□□ -0.1
TPM1-227ENST00000560970 ZBTB1Q9Y2K1 713 aa14.45□□□□□ -0.1
TPM1-227ENST00000560970 CARMIL3Q8ND23 1372 aa14.45□□□□□ -0.1
TPM1-227ENST00000560970 KDM2BQ8NHM5 1336 aa14.44□□□□□ -0.1
TPM1-227ENST00000560970 ZC3H4Q9UPT8 1303 aaKnown RBP14.44□□□□□ -0.1
TPM1-227ENST00000560970 CHRNA5P30532 468 aa14.44□□□□□ -0.1
TPM1-227ENST00000560970 SLC39A6Q13433 755 aa14.44□□□□□ -0.1
TPM1-227ENST00000560970 MTHFSDQ2M296 383 aaKnown RBP14.44□□□□□ -0.1
TPM1-227ENST00000560970 VSIG10Q8N0Z9 540 aa14.44□□□□□ -0.1
TPM1-227ENST00000560970 RNF181Q9P0P0 153 aa14.44□□□□□ -0.1
TPM1-227ENST00000560970 NARFQ9UHQ1 456 aa14.44□□□□□ -0.1
TPM1-227ENST00000560970 KDM3BQ7LBC6 1761 aa14.44□□□□□ -0.1
TPM1-227ENST00000560970 TM4SF1P30408 202 aa14.43□□□□□ -0.1
TPM1-227ENST00000560970 NFIXQ14938 502 aa14.42□□□□□ -0.1
TPM1-227ENST00000560970 C16orf71Q8IYS4 520 aaPredicted RBP14.42□□□□□ -0.1
TPM1-227ENST00000560970 RBM46Q8TBY0 533 aaKnown RBP14.42□□□□□ -0.1
TPM1-227ENST00000560970 DDX10Q13206 875 aaKnown RBP14.41□□□□□ -0.1
TPM1-227ENST00000560970 TTC5Q8N0Z6 440 aa14.41□□□□□ -0.1
TPM1-227ENST00000560970 HEG1Q9ULI3 1381 aa14.41□□□□□ -0.1
TPM1-227ENST00000560970 SLX4Q8IY92 1834 aa14.41□□□□□ -0.1
TPM1-227ENST00000560970 RASSF7Q02833 373 aa14.4□□□□□ -0.1
TPM1-227ENST00000560970 GAS2L2Q8NHY3 880 aa14.4□□□□□ -0.1
TPM1-227ENST00000560970 BCL2L12Q9HB09 334 aa14.4□□□□□ -0.1
TPM1-227ENST00000560970 CEMIPQ8WUJ3 1361 aa14.39□□□□□ -0.11
TPM1-227ENST00000560970 STARD3NLO95772 234 aa14.38□□□□□ -0.11
TPM1-227ENST00000560970 TEFQ10587 303 aa14.38□□□□□ -0.11
TPM1-227ENST00000560970 FSTL1Q12841 308 aa14.38□□□□□ -0.11
TPM1-227ENST00000560970 SCN4AP35499 1836 aa14.38□□□□□ -0.11
TPM1-227ENST00000560970 NUP98P52948 1817 aa14.37□□□□□ -0.11
TPM1-227ENST00000560970 A0A087WZG4 1122 aa14.37□□□□□ -0.11
TPM1-227ENST00000560970 GNAT3A8MTJ3 354 aa14.37□□□□□ -0.11
TPM1-227ENST00000560970 U2SURPO15042 1029 aaKnown RBP14.37□□□□□ -0.11
TPM1-227ENST00000560970 SERPINB2P05120 415 aa14.37□□□□□ -0.11
TPM1-227ENST00000560970 CANXP27824 592 aaKnown RBP14.37□□□□□ -0.11
TPM1-227ENST00000560970 PPP2R1AP30153 589 aa14.37□□□□□ -0.11
TPM1-227ENST00000560970 EIF5P55010 431 aaKnown RBP14.37□□□□□ -0.11
TPM1-227ENST00000560970 LMNB1P20700 586 aa14.36□□□□□ -0.11
TPM1-227ENST00000560970 ZNF790Q6PG37 636 aa14.36□□□□□ -0.11
TPM1-227ENST00000560970 C2CD5Q86YS7 1000 aa14.36□□□□□ -0.11
TPM1-227ENST00000560970 ZNF496Q96IT1 587 aaPredicted RBP14.36□□□□□ -0.11
TPM1-227ENST00000560970 TTLL6Q8N841 843 aa14.35□□□□□ -0.11
TPM1-227ENST00000560970 ANKRD36CQ5JPF3 1778 aa14.34□□□□□ -0.11
TPM1-227ENST00000560970 H0YIN7 160 aa14.34□□□□□ -0.11
TPM1-227ENST00000560970 IL6STP40189 918 aaPredicted RBP14.34□□□□□ -0.11
TPM1-227ENST00000560970 DNAJC5GQ8N7S2 189 aa14.34□□□□□ -0.11
TPM1-227ENST00000560970 SMC1BQ8NDV3 1235 aa14.34□□□□□ -0.11
TPM1-227ENST00000560970 FMNL2Q96PY5 1086 aa14.34□□□□□ -0.11
TPM1-227ENST00000560970 TEX13AQ9BXU3 409 aaPredicted RBP14.34□□□□□ -0.11
TPM1-227ENST00000560970 ZNF330Q9Y3S2 320 aaPredicted RBP14.34□□□□□ -0.11
TPM1-227ENST00000560970 PCNTO95613 3336 aa14.34□□□□□ -0.11
TPM1-227ENST00000560970 NFKBIEO00221 500 aa14.33□□□□□ -0.12
TPM1-227ENST00000560970 TBC1D9BQ66K14 1250 aa14.33□□□□□ -0.12
TPM1-227ENST00000560970 BICDL1Q6ZP65 573 aa14.33□□□□□ -0.12
TPM1-227ENST00000560970 IL17REQ8NFR9 667 aa14.33□□□□□ -0.12
TPM1-227ENST00000560970 RRAGCQ9HB90 399 aa14.33□□□□□ -0.12
TPM1-227ENST00000560970 PDZRN3Q9UPQ7 1066 aa14.33□□□□□ -0.12
TPM1-227ENST00000560970 ZNF316A6NFI3 1004 aaPredicted RBP14.32□□□□□ -0.12
TPM1-227ENST00000560970 PRELPP51888 382 aa14.32□□□□□ -0.12
TPM1-227ENST00000560970 PRR5LQ6MZQ0 368 aa14.32□□□□□ -0.12
TPM1-227ENST00000560970 KLRG1Q96E93 195 aa14.32□□□□□ -0.12
TPM1-227ENST00000560970 CFAP53Q96M91 514 aa14.32□□□□□ -0.12
TPM1-227ENST00000560970 RSPH6AQ9H0K4 717 aa14.32□□□□□ -0.12
TPM1-227ENST00000560970 GLTPD2A6NH11 291 aa14.31□□□□□ -0.12
TPM1-227ENST00000560970 PRKAR2BP31323 418 aa14.31□□□□□ -0.12
TPM1-227ENST00000560970 PDE6BP35913 854 aa14.31□□□□□ -0.12
TPM1-227ENST00000560970 CNBD1Q8NA66 436 aa14.31□□□□□ -0.12
TPM1-227ENST00000560970 ADAMTSL1Q8N6G6 1762 aa14.31□□□□□ -0.12
TPM1-227ENST00000560970 HTRA3P83110 453 aa14.3□□□□□ -0.12
TPM1-227ENST00000560970 NPM2Q86SE8 214 aaKnown RBP14.3□□□□□ -0.12
TPM1-227ENST00000560970 BRIP1Q9BX63 1249 aa14.3□□□□□ -0.12
TPM1-227ENST00000560970 LTBP3Q9NS15 1303 aa14.3□□□□□ -0.12
TPM1-227ENST00000560970 BTBD11A6QL63 1104 aa14.29□□□□□ -0.12
TPM1-227ENST00000560970 NPHP1O15259 732 aa14.29□□□□□ -0.12
TPM1-227ENST00000560970 CAMTA2O94983 1202 aa14.29□□□□□ -0.12
TPM1-227ENST00000560970 ST5P78524 1137 aa14.29□□□□□ -0.12
TPM1-227ENST00000560970 JMYQ8N9B5 988 aa14.29□□□□□ -0.12
TPM1-227ENST00000560970 TBC1D2BQ9UPU7 963 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms