RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 MST1RQ04912 1400 aa7.56□□□□□ -1.2
ZEB1-220ENST00000560909 SRPK2P78362 688 aaKnown RBP7.56□□□□□ -1.2
ZEB1-220ENST00000560909 CARD14Q9BXL6 1004 aa7.56□□□□□ -1.2
ZEB1-220ENST00000560909 SLC12A5Q9H2X9 1139 aa7.56□□□□□ -1.2
ZEB1-220ENST00000560909 RTN4Q9NQC3 1192 aaKnown RBP7.56□□□□□ -1.2
ZEB1-220ENST00000560909 CABP1Q9NZU7 370 aa7.56□□□□□ -1.2
ZEB1-220ENST00000560909 C1orf167Q5SNV9 1468 aa7.55□□□□□ -1.2
ZEB1-220ENST00000560909 SSH2Q76I76 1423 aa7.55□□□□□ -1.2
ZEB1-220ENST00000560909 CFHP08603 1231 aa7.55□□□□□ -1.2
ZEB1-220ENST00000560909 ATF3P18847 181 aa7.55□□□□□ -1.2
ZEB1-220ENST00000560909 ZFP42Q96MM3 310 aa7.55□□□□□ -1.2
ZEB1-220ENST00000560909 BRD4O60885 1362 aaPredicted RBP7.55□□□□□ -1.2
ZEB1-220ENST00000560909 ANKRD36BQ8N2N9 1353 aa7.55□□□□□ -1.2
ZEB1-220ENST00000560909 NPC1L1Q9UHC9 1359 aa7.55□□□□□ -1.2
ZEB1-220ENST00000560909 NALCNQ8IZF0 1738 aa7.55□□□□□ -1.2
ZEB1-220ENST00000560909 XIRP1Q702N8 1843 aaKnown RBP7.55□□□□□ -1.2
ZEB1-220ENST00000560909 USP32Q8NFA0 1604 aa7.54□□□□□ -1.2
ZEB1-220ENST00000560909 DDX10Q13206 875 aaKnown RBP7.54□□□□□ -1.2
ZEB1-220ENST00000560909 ZNF385CQ66K41 422 aaPredicted RBP7.54□□□□□ -1.2
ZEB1-220ENST00000560909 KRTAP19-1Q8IUB9 90 aa7.54□□□□□ -1.2
ZEB1-220ENST00000560909 SVOPQ8N4V2 548 aa7.54□□□□□ -1.2
ZEB1-220ENST00000560909 GALNT6Q8NCL4 622 aa7.54□□□□□ -1.2
ZEB1-220ENST00000560909 PANK3Q9H999 370 aa7.54□□□□□ -1.2
ZEB1-220ENST00000560909 SLAIN2Q9P270 581 aa7.54□□□□□ -1.2
ZEB1-220ENST00000560909 FMN2Q9NZ56 1722 aa7.54□□□□□ -1.2
ZEB1-220ENST00000560909 PPIP5K1Q6PFW1 1433 aa7.53□□□□□ -1.2
ZEB1-220ENST00000560909 CAPN5O15484 640 aaPredicted RBP7.53□□□□□ -1.2
ZEB1-220ENST00000560909 MARSP56192 900 aaKnown RBP7.53□□□□□ -1.2
ZEB1-220ENST00000560909 KRT76Q01546 638 aa7.53□□□□□ -1.2
ZEB1-220ENST00000560909 C14orf37Q86TY3 774 aa7.53□□□□□ -1.2
ZEB1-220ENST00000560909 TERF2IPQ9NYB0 399 aa7.53□□□□□ -1.2
ZEB1-220ENST00000560909 ACEP12821 1306 aa7.52□□□□□ -1.2
ZEB1-220ENST00000560909 TOPAZ1Q8N9V7 1692 aa7.52□□□□□ -1.21
ZEB1-220ENST00000560909 A0A1W2PP64 1363 aa7.52□□□□□ -1.21
ZEB1-220ENST00000560909 PROCP04070 461 aa7.52□□□□□ -1.21
ZEB1-220ENST00000560909 BRINP3Q76B58 766 aa7.52□□□□□ -1.21
ZEB1-220ENST00000560909 CNTNAP3BQ96NU0 1288 aa7.52□□□□□ -1.21
ZEB1-220ENST00000560909 ORAI2Q96SN7 254 aa7.52□□□□□ -1.21
ZEB1-220ENST00000560909 CNTNAP3Q9BZ76 1288 aa7.52□□□□□ -1.21
ZEB1-220ENST00000560909 MYOM1P52179 1685 aa7.51□□□□□ -1.21
ZEB1-220ENST00000560909 PRIM1P49642 420 aaKnown RBP7.51□□□□□ -1.21
ZEB1-220ENST00000560909 HDGFL2Q7Z4V5 671 aaPredicted RBP7.51□□□□□ -1.21
ZEB1-220ENST00000560909 TMC1Q8TDI8 760 aa7.51□□□□□ -1.21
ZEB1-220ENST00000560909 SCARF2Q96GP6 870 aaPredicted RBP7.51□□□□□ -1.21
ZEB1-220ENST00000560909 EYA1Q99502 592 aa7.51□□□□□ -1.21
ZEB1-220ENST00000560909 REPIN1Q9BWE0 567 aaKnown RBP7.51□□□□□ -1.21
ZEB1-220ENST00000560909 USP6P35125 1406 aa7.51□□□□□ -1.21
ZEB1-220ENST00000560909 EDC4Q6P2E9 1401 aaKnown RBP7.51□□□□□ -1.21
ZEB1-220ENST00000560909 NUTM2FA1L443 756 aa7.5□□□□□ -1.21
ZEB1-220ENST00000560909 SOBPA7XYQ1 873 aa7.5□□□□□ -1.21
ZEB1-220ENST00000560909 GTPBP6O43824 516 aaPredicted RBP7.5□□□□□ -1.21
ZEB1-220ENST00000560909 TOM1O60784 492 aa7.5□□□□□ -1.21
ZEB1-220ENST00000560909 TRIM32Q13049 653 aa7.5□□□□□ -1.21
ZEB1-220ENST00000560909 ESCO1Q5FWF5 840 aa7.5□□□□□ -1.21
ZEB1-220ENST00000560909 TTC13Q8NBP0 860 aa7.5□□□□□ -1.21
ZEB1-220ENST00000560909 CDHR5Q9HBB8 845 aa7.5□□□□□ -1.21
ZEB1-220ENST00000560909 SOS2Q07890 1332 aaPredicted RBP7.5□□□□□ -1.21
ZEB1-220ENST00000560909 TTC21BQ7Z4L5 1316 aa7.5□□□□□ -1.21
ZEB1-220ENST00000560909 TTC21AQ8NDW8 1320 aa7.5□□□□□ -1.21
ZEB1-220ENST00000560909 SBNO1A3KN83 1393 aa7.49□□□□□ -1.21
ZEB1-220ENST00000560909 NSD2O96028 1365 aa7.49□□□□□ -1.21
ZEB1-220ENST00000560909 USP31Q70CQ4 1352 aa7.49□□□□□ -1.21
ZEB1-220ENST00000560909 KTN1Q86UP2 1357 aaKnown RBP7.49□□□□□ -1.21
ZEB1-220ENST00000560909 FYB1O15117 783 aa7.49□□□□□ -1.21
ZEB1-220ENST00000560909 ITGB2P05107 769 aa7.49□□□□□ -1.21
ZEB1-220ENST00000560909 PADI6Q6TGC4 694 aa7.49□□□□□ -1.21
ZEB1-220ENST00000560909 NGDNQ8NEJ9 315 aaKnown RBP7.49□□□□□ -1.21
ZEB1-220ENST00000560909 PMFBP1Q8TBY8 1022 aa7.49□□□□□ -1.21
ZEB1-220ENST00000560909 POLR3GLQ9BT43 218 aa7.49□□□□□ -1.21
ZEB1-220ENST00000560909 KNSTRNQ9Y448 316 aa7.49□□□□□ -1.21
ZEB1-220ENST00000560909 CGNL1Q0VF96 1302 aa7.49□□□□□ -1.21
ZEB1-220ENST00000560909 NPHP3Q7Z494 1330 aa7.49□□□□□ -1.21
ZEB1-220ENST00000560909 FOXO3O43524 673 aa7.48□□□□□ -1.21
ZEB1-220ENST00000560909 LCE1DQ5T752 114 aa7.48□□□□□ -1.21
ZEB1-220ENST00000560909 DIEXFQ68CQ4 756 aaKnown RBP7.48□□□□□ -1.21
ZEB1-220ENST00000560909 BBXQ8WY36 941 aaPredicted RBP7.48□□□□□ -1.21
ZEB1-220ENST00000560909 NSD3Q9BZ95 1437 aa7.48□□□□□ -1.21
ZEB1-220ENST00000560909 PXDNQ92626 1479 aa7.48□□□□□ -1.21
ZEB1-220ENST00000560909 PARD3Q8TEW0 1356 aa7.47□□□□□ -1.21
ZEB1-220ENST00000560909 ALDH1A1P00352 501 aa7.47□□□□□ -1.21
ZEB1-220ENST00000560909 PUS10Q3MIT2 529 aaKnown RBP7.47□□□□□ -1.21
ZEB1-220ENST00000560909 KRT28Q7Z3Y7 464 aa7.47□□□□□ -1.21
ZEB1-220ENST00000560909 PRKRIP1Q9H875 184 aaPredicted RBP7.47□□□□□ -1.21
ZEB1-220ENST00000560909 KIF1AQ12756 1690 aa7.47□□□□□ -1.21
ZEB1-220ENST00000560909 ITSN1Q15811 1721 aa7.47□□□□□ -1.21
ZEB1-220ENST00000560909 ARHGEF15O94989 841 aa7.46□□□□□ -1.22
ZEB1-220ENST00000560909 PSME1Q06323 249 aa7.46□□□□□ -1.22
ZEB1-220ENST00000560909 RALBP1Q15311 655 aa7.46□□□□□ -1.22
ZEB1-220ENST00000560909 MON2Q7Z3U7 1717 aa7.46□□□□□ -1.22
ZEB1-220ENST00000560909 SPATA31A3Q5VYP0 1347 aa7.46□□□□□ -1.22
ZEB1-220ENST00000560909 AKAP12Q02952 1782 aa7.46□□□□□ -1.22
ZEB1-220ENST00000560909 AHDC1Q5TGY3 1603 aaPredicted RBP7.45□□□□□ -1.22
ZEB1-220ENST00000560909 OVOS2A0A0J9YW53 1432 aa7.45□□□□□ -1.22
ZEB1-220ENST00000560909 OVOS2Q6IE36 1432 aa7.45□□□□□ -1.22
ZEB1-220ENST00000560909 UBAP1LF5GYI3 381 aa7.45□□□□□ -1.22
ZEB1-220ENST00000560909 PPFIA3O75145 1194 aa7.45□□□□□ -1.22
ZEB1-220ENST00000560909 CAMK2BQ13554 666 aa7.45□□□□□ -1.22
ZEB1-220ENST00000560909 NME9Q86XW9 330 aa7.45□□□□□ -1.22
ZEB1-220ENST00000560909 WHAMMQ8TF30 809 aa7.45□□□□□ -1.22
ZEB1-220ENST00000560909 RGPD8O14715 1765 aaPredicted RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms