RNA–Protein interactions for RNA: ENST00000560420.1

PSME1-207, Transcript of proteasome activator subunit 1, humanhuman

TSL 2

Gene PSME1, Length 922 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME1-207ENST00000560420 RFC4P35249 363 aa19.45■□□□□ 0.7
PSME1-207ENST00000560420 EIF5P55010 431 aaKnown RBP19.45■□□□□ 0.7
PSME1-207ENST00000560420 NLGN1Q8N2Q7 840 aa19.45■□□□□ 0.7
PSME1-207ENST00000560420 SCN7AQ01118 1682 aa19.45■□□□□ 0.7
PSME1-207ENST00000560420 TAF7Q15545 349 aaPredicted RBP19.44■□□□□ 0.7
PSME1-207ENST00000560420 TEX13AQ9BXU3 409 aaPredicted RBP19.44■□□□□ 0.7
PSME1-207ENST00000560420 MAPK8IP3Q9UPT6 1336 aa19.44■□□□□ 0.7
PSME1-207ENST00000560420 LAMB4A4D0S4 1761 aa19.44■□□□□ 0.7
PSME1-207ENST00000560420 STARD3NLO95772 234 aa19.43■□□□□ 0.7
PSME1-207ENST00000560420 NEFMP07197 916 aa19.43■□□□□ 0.7
PSME1-207ENST00000560420 TMPOP42166 694 aaKnown RBP19.43■□□□□ 0.7
PSME1-207ENST00000560420 THUMPD2Q9BTF0 503 aaKnown RBP19.43■□□□□ 0.7
PSME1-207ENST00000560420 BCL2L12Q9HB09 334 aa19.43■□□□□ 0.7
PSME1-207ENST00000560420 NRXN2Q9P2S2 1712 aa19.42■□□□□ 0.7
PSME1-207ENST00000560420 FKBP8Q14318 412 aa19.42■□□□□ 0.7
PSME1-207ENST00000560420 NARFQ9UHQ1 456 aa19.42■□□□□ 0.7
PSME1-207ENST00000560420 PRAMEF22A3QJZ6 481 aa19.41■□□□□ 0.7
PSME1-207ENST00000560420 ADAMTS8Q9UP79 889 aa19.41■□□□□ 0.7
PSME1-207ENST00000560420 USP16Q9Y5T5 823 aa19.41■□□□□ 0.7
PSME1-207ENST00000560420 PXDNLA1KZ92 1463 aa19.41■□□□□ 0.7
PSME1-207ENST00000560420 BCORQ6W2J9 1755 aa19.4■□□□□ 0.7
PSME1-207ENST00000560420 TM4SF1P30408 202 aa19.4■□□□□ 0.7
PSME1-207ENST00000560420 DDR1Q08345 913 aa19.4■□□□□ 0.7
PSME1-207ENST00000560420 SNRPA1P09661 255 aaKnown RBP19.39■□□□□ 0.69
PSME1-207ENST00000560420 IL6STP40189 918 aaPredicted RBP19.39■□□□□ 0.69
PSME1-207ENST00000560420 USPL1Q5W0Q7 1092 aa19.39■□□□□ 0.69
PSME1-207ENST00000560420 KLHL34Q8N239 644 aa19.39■□□□□ 0.69
PSME1-207ENST00000560420 RUNDC1Q96C34 613 aa19.39■□□□□ 0.69
PSME1-207ENST00000560420 MIS18AQ9NYP9 233 aa19.39■□□□□ 0.69
PSME1-207ENST00000560420 A1BGP04217 495 aa19.38■□□□□ 0.69
PSME1-207ENST00000560420 YBX3P16989 372 aaKnown RBP eCLIP19.38■□□□□ 0.693e-6■■□□□ 12.4
PSME1-207ENST00000560420 CANXP27824 592 aaKnown RBP19.38■□□□□ 0.69
PSME1-207ENST00000560420 RIPK4P57078 832 aa19.38■□□□□ 0.69
PSME1-207ENST00000560420 CCDC146Q8IYE0 955 aa19.38■□□□□ 0.69
PSME1-207ENST00000560420 PNISRQ8TF01 805 aaKnown RBP19.38■□□□□ 0.69
PSME1-207ENST00000560420 POLRMTO00411 1230 aaKnown RBP19.37■□□□□ 0.69
PSME1-207ENST00000560420 EIF4A1P60842 406 aaKnown RBP19.37■□□□□ 0.69
PSME1-207ENST00000560420 WDR43Q15061 677 aaKnown RBP eCLIP19.37■□□□□ 0.69
PSME1-207ENST00000560420 CCDC184Q52MB2 194 aa19.37■□□□□ 0.69
PSME1-207ENST00000560420 TRIM35Q9UPQ4 493 aa19.37■□□□□ 0.69
PSME1-207ENST00000560420 BRCA1P38398 1863 aaKnown RBP19.37■□□□□ 0.69
PSME1-207ENST00000560420 BABAM1Q9NWV8 329 aa19.36■□□□□ 0.69
PSME1-207ENST00000560420 AFDNP55196 1824 aaKnown RBP19.36■□□□□ 0.69
PSME1-207ENST00000560420 DCAF8L1A6NGE4 600 aa19.35■□□□□ 0.69
PSME1-207ENST00000560420 NBPF26B4DH59 902 aa19.35■□□□□ 0.69
PSME1-207ENST00000560420 ZPR1O75312 459 aa19.35■□□□□ 0.69
PSME1-207ENST00000560420 GIGYF1O75420 1035 aaPredicted RBP19.35■□□□□ 0.69
PSME1-207ENST00000560420 NFIXQ14938 502 aa19.35■□□□□ 0.69
PSME1-207ENST00000560420 NBPF10Q6P3W6 841 aaKnown RBP19.35■□□□□ 0.69
PSME1-207ENST00000560420 NBPF15Q8N660 670 aa19.35■□□□□ 0.69
PSME1-207ENST00000560420 CHD4Q14839 1912 aa19.35■□□□□ 0.69
PSME1-207ENST00000560420 A0A087WZG4 1122 aa19.34■□□□□ 0.69
PSME1-207ENST00000560420 LMOD3Q0VAK6 560 aa19.34■□□□□ 0.69
PSME1-207ENST00000560420 RRP7AQ9Y3A4 280 aaKnown RBP19.34■□□□□ 0.69
PSME1-207ENST00000560420 N4BP2Q86UW6 1770 aaPredicted RBP19.34■□□□□ 0.69
PSME1-207ENST00000560420 CAMTA2O94983 1202 aa19.33■□□□□ 0.68
PSME1-207ENST00000560420 TGFB2P61812 414 aa19.33■□□□□ 0.68
PSME1-207ENST00000560420 PARP3Q9Y6F1 533 aa19.33■□□□□ 0.68
PSME1-207ENST00000560420 GPR162Q16538 588 aa19.32■□□□□ 0.68
PSME1-207ENST00000560420 KCNA3P22001 575 aa19.31■□□□□ 0.68
PSME1-207ENST00000560420 PIP4K2AP48426 406 aaPredicted RBP19.31■□□□□ 0.68
PSME1-207ENST00000560420 CHL1O00533 1208 aa19.3■□□□□ 0.68
PSME1-207ENST00000560420 RGL2O15211 777 aa19.3■□□□□ 0.68
PSME1-207ENST00000560420 YY1P25490 414 aa19.3■□□□□ 0.68
PSME1-207ENST00000560420 TBC1D2BQ9UPU7 963 aa19.3■□□□□ 0.68
PSME1-207ENST00000560420 TBC1D9BQ66K14 1250 aa19.29■□□□□ 0.68
PSME1-207ENST00000560420 LRP10Q7Z4F1 713 aa19.29■□□□□ 0.68
PSME1-207ENST00000560420 TSPYL4Q9UJ04 414 aa19.29■□□□□ 0.68
PSME1-207ENST00000560420 DLEC1Q9Y238 1755 aa19.28■□□□□ 0.68
PSME1-207ENST00000560420 CARMIL3Q8ND23 1372 aa19.28■□□□□ 0.68
PSME1-207ENST00000560420 ANKRD31Q8N7Z5 1873 aa19.27■□□□□ 0.68
PSME1-207ENST00000560420 DPEP1P16444 411 aa19.27■□□□□ 0.68
PSME1-207ENST00000560420 DZIP3Q86Y13 1208 aaKnown RBP19.27■□□□□ 0.68
PSME1-207ENST00000560420 ERBB4Q15303 1308 aa19.26■□□□□ 0.67
PSME1-207ENST00000560420 APAF1O14727 1248 aa19.26■□□□□ 0.67
PSME1-207ENST00000560420 GRIN3BO60391 1043 aa19.26■□□□□ 0.67
PSME1-207ENST00000560420 ZNF853P0CG23 659 aa19.26■□□□□ 0.67
PSME1-207ENST00000560420 NEUROD2Q15784 382 aa19.26■□□□□ 0.67
PSME1-207ENST00000560420 ARFGEF1Q9Y6D6 1849 aa19.25■□□□□ 0.67
PSME1-207ENST00000560420 A0A0G2JLW4 131 aa19.25■□□□□ 0.67
PSME1-207ENST00000560420 ANP32CO43423 234 aa19.25■□□□□ 0.67
PSME1-207ENST00000560420 SERPINB2P05120 415 aa19.25■□□□□ 0.67
PSME1-207ENST00000560420 PDIA6Q15084 440 aa19.25■□□□□ 0.67
PSME1-207ENST00000560420 CLEC4GQ6UXB4 293 aa19.25■□□□□ 0.67
PSME1-207ENST00000560420 ZNF330Q9Y3S2 320 aaPredicted RBP19.25■□□□□ 0.67
PSME1-207ENST00000560420 PELP1Q8IZL8 1130 aaKnown RBP19.24■□□□□ 0.67
PSME1-207ENST00000560420 ADCY9O60503 1353 aa19.23■□□□□ 0.67
PSME1-207ENST00000560420 CFAP44Q96MT7 982 aa19.23■□□□□ 0.67
PSME1-207ENST00000560420 COL11A2P13942 1736 aaPredicted RBP19.22■□□□□ 0.67
PSME1-207ENST00000560420 CHRNA5P30532 468 aa19.21■□□□□ 0.67
PSME1-207ENST00000560420 KRT24Q2M2I5 525 aa19.21■□□□□ 0.67
PSME1-207ENST00000560420 NCBP3Q53F19 620 aaKnown RBP19.21■□□□□ 0.67
PSME1-207ENST00000560420 PRR5LQ6MZQ0 368 aa19.21■□□□□ 0.67
PSME1-207ENST00000560420 ATP10DQ9P241 1426 aa19.21■□□□□ 0.67
PSME1-207ENST00000560420 WWC3Q9ULE0 1092 aa19.21■□□□□ 0.67
PSME1-207ENST00000560420 ERVV-1B6SEH8 477 aa19.2■□□□□ 0.66
PSME1-207ENST00000560420 HLFQ16534 295 aa19.2■□□□□ 0.66
PSME1-207ENST00000560420 CCDC27Q2M243 656 aa19.2■□□□□ 0.66
PSME1-207ENST00000560420 BICDL1Q6ZP65 573 aa19.2■□□□□ 0.66
PSME1-207ENST00000560420 MRS2Q9HD23 443 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms